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M747DRAFT_297094-T1, M747DRAFT_297094-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297094-T1
Unique NameM747DRAFT_297094-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851923.1:3402..4871-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297094-T1 ID=M747DRAFT_297094-T1|Name=M747DRAFT_297094-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1470bp|location=Sequence derived from alignment at KZ851923.1:3402..4871- (Aspergillus niger ATCC 13496)
CGCTTCGTCCATCGAGTGTCGCATCTCACTGTCGACTTTTAATTTCCGTC
GACTTCTATCGCAGACTCTGTATCGCTTCTCTTCATCTCCAACCCCTCAC
ATCACATCCAACCTTCATCATGGCTGCTCAGGTACCGACCTTCAAGCTTG
TCCTCGTCGGTGACGGTGGTACTGGAAAGGCAAGTTAAAACAAGAATTTC
TTATCCTATATGGCTTACCGGGTGGAGGTGGCATGTCACCTCTTCGACGC
CTCTTTATGCTCGACTGCATTCCTGCCATGCGCGTTTACCCCTCTCTGTT
GCCCGTCGTCTCTATCAACAGAAAACTTCATCGCCCGCCCAACCTCACCC
AGACAAGACATCATTACTGACTGAGAATTTTCACTGCAGACCACCTTCGT
CAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTCG
GTGTCGAAGTGCACCCTCTCGCTTTTAACACCGTATGCCCCGCCGGAAAC
CCCGCTTTGTCCATTCCGCCGTCTTTGTGCCGGTCCGACTAACGCTTTTG
CCAGAACCTGGGTAACATCCAGTTCGACGTCTGGGACACTGCTGGTCAGG
AGAAGTTCGGTGGTCTTCGCGATGGTTACTACATCAACGGACAGTGCGGT
ATCATCATGTTCGATGTTACCTCCCGTATCACCTACAAGAACGTCCCCAA
CTGGCACCGTAAGTGCTTCCACAAATCAGCACTCGAACCACGCGCAATCT
GGATCAAATTGACAAATTCACTCTAGGTGATCTCGTCCGTGTCTGCGAGG
GTATCCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAAG
GTGAAGGCCAAGACCATCACCTTCCACCGCAAGAAGAACCTCCAGTACTA
CGACATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGGC
TCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGGTAAGTCAGACACGGTCA
TTGGTCGCTTTCACTGGTGAGACTGGAAGCTAACAAGCATTTCCCAGGAA
TTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGA
GCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCC
TGCCCGACGAGGAGGACGCCGATTTGTAAACGCGCGATCAATGAAGGCTG
GAACCAGAGCCTGGGTCACGAGCTCGGGCTCGTGGCTGCTGTTCTGTCCC
AATAACTGGGTACGTTATGCAAGATTTCAAATCACGATACAATGATAGCG
GAGGGAGGAAATTAAGCCCGAGAACGGTCGGCATGATTATGCATTTGCAA
TATTTACCACTAGTAGTCTAGACTCTGATTATCTCTACAAAGTTCCTTTT
TGATAACGGTGACACTGTTTATCCGTCCATCGGCTATATCTGTTGGACAA
AAAAGTTTACATACTCTCTA
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Coding sequence (CDS) from alignment at KZ851923.1:3402..4871-

>M747DRAFT_297094-T1 ID=M747DRAFT_297094-T1|Name=M747DRAFT_297094-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3225bp|location=Sequence derived from alignment at KZ851923.1:3402..4871- (Aspergillus niger ATCC 13496)
GAATTCGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCC
GGAGCTTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGC
CCCTGCCCGACGAGGAGGACGCCGATTTGTAAGTGATCTCGTCCGTGTCT
GCGAGGGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAG
CGTAAGGTGAAGGCCAAGACCATCACCTTCCACCGCAAGAAGAACCTCCA
GTACTACGACATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCC
TCTGGCTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGAACCTGGGTAAC
ATCCAGTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCT
TCGCGATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATG
TTACCTCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCACCACCTT
CGTCAAGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTC
TCGGTGTCGAAGTGCACCCTCTCGCTTTTAACACCATGGCTGCTCAGGTA
CCGACCTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGGAATT
CGTTGCTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGC
TTCTGGCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTG
CCCGACGAGGAGGACGCCGATTTGTAAGTGATCTCGTCCGTGTCTGCGAG
GGTATCCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAA
GGTGAAGGCCAAGACCATCACCTTCCACCGCAAGAAGAACCTCCAGTACT
ACGACATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGG
CTCGCTCGCAAGTTGGTCGGCAACCCCCAGCTGAACCTGGGTAACATCCA
GTTCGACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCG
ATGGTTACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTACC
TCCCGTATCACCTACAAGAACGTCCCCAACTGGCACCACCACCTTCGTCA
AGCGCCACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGT
GTCGAAGTGCACCCTCTCGCTTTTAACACCATGGCTGCTCAGGTACCGAC
CTTCAAGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGGAATTCGTTG
CTGCCCCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTG
GCCCAGTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGA
CGAGGAGGACGCCGATTTGTAAGTGATCTCGTCCGTGTCTGCGAGGGTAT
CCCCATCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGA
AGGCCAAGACCATCACCTTCCACCGCAAGAAGAACCTCCAGTACTACGAC
ATCTCCGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGC
TCGCAAGTTGGTCGGCAACCCCCAGCTGAACCTGGGTAACATCCAGTTCG
ACGTCTGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCGATGGT
TACTACATCAACGGACAGTGCGGTATCATCATGTTCGATGTTACCTCCCG
TATCACCTACAAGAACGTCCCCAACTGGCACCACCACCTTCGTCAAGCGC
CACTTGACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGA
AGTGCACCCTCTCGCTTTTAACACCATGGCTGCTCAGGTACCGACCTTCA
AGCTTGTCCTCGTCGGTGACGGTGGTACTGGAAAGGAATTCGTTGCTGCC
CCCGCTCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGCCCA
GTACGAGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGACGAGG
AGGACGCCGATTTGTAAGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCA
TCGTGCTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCC
AAGACCATCACCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTC
CGCCAAGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCA
AGTTGGTCGGCAACCCCCAGCTGAACCTGGGTAACATCCAGTTCGACGTC
TGGGACACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCGATGGTTACTA
CATCAACGGACAGTGCGGTATCATCATGTTCGATGTTACCTCCCGTATCA
CCTACAAGAACGTCCCCAACTGGCACCACCACCTTCGTCAAGCGCCACTT
GACTGGCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAGTGC
ACCCTCTCGCTTTTAACACCATGGCTGCTCAGGTACCGACCTTCAAGCTT
GTCCTCGTCGGTGACGGTGGTACTGGAAAGGAATTCGTTGCTGCCCCCGC
TCTTGCTCCCCCCGAGGTCCAAGTCAACCCGGAGCTTCTGGCCCAGTACG
AGAAGGAGATGGACGCTGCTGCCAACATGCCCCTGCCCGACGAGGAGGAC
GCCGATTTGTAAGTGATCTCGTCCGTGTCTGCGAGGGTATCCCCATCGTG
CTGTGCGGTAACAAGGTCGATGTTAAGGAGCGTAAGGTGAAGGCCAAGAC
CATCACCTTCCACCGCAAGAAGAACCTCCAGTACTACGACATCTCCGCCA
AGTCCAACTACAATTTCGAGAAGCCCTTCCTCTGGCTCGCTCGCAAGTTG
GTCGGCAACCCCCAGCTGAACCTGGGTAACATCCAGTTCGACGTCTGGGA
CACTGCTGGTCAGGAGAAGTTCGGTGGTCTTCGCGATGGTTACTACATCA
ACGGACAGTGCGGTATCATCATGTTCGATGTTACCTCCCGTATCACCTAC
AAGAACGTCCCCAACTGGCACCACCACCTTCGTCAAGCGCCACTTGACTG
GCGAGTTCGAGAAGAAGTACATCGCCACTCTCGGTGTCGAAGTGCACCCT
CTCGCTTTTAACACCATGGCTGCTCAGGTACCGACCTTCAAGCTTGTCCT
CGTCGGTGACGGTGGTACTGGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006913nucleocytoplasmic transport
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GSP1M747DRAFT_297094Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297094-T1M747DRAFT_297094-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297094-T1.cdsM747DRAFT_297094-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297094-T1.utr3p1M747DRAFT_297094-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297094-T1.exon5M747DRAFT_297094-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_297094-T1.exon4M747DRAFT_297094-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_297094-T1.exon3M747DRAFT_297094-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297094-T1.exon2M747DRAFT_297094-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297094-T1.exon1M747DRAFT_297094-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297094-T1.utr5p1M747DRAFT_297094-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264LKR
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR002041
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductGTP-binding nuclear protein gsp1/Ran
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851923.1supercontigKZ851923.1:3402..4871 -
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