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M747DRAFT_297180-T1, M747DRAFT_297180-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297180-T1
Unique NameM747DRAFT_297180-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851924.1:59552..60911-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297180-T1 ID=M747DRAFT_297180-T1|Name=M747DRAFT_297180-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1360bp|location=Sequence derived from alignment at KZ851924.1:59552..60911- (Aspergillus niger ATCC 13496)
CGGTGTGGATCTCGCACATCCTGGACTCTCTTGGTCAGATTGATTCTAAC
ATCGCATTCTCATCCCTAGACCTCTGAATCTCACGCAACCGCCGTCATGG
GTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCAAGGAGATG
CGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACCATCCTGTA
CAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGATTGGTCAGT
CCTCCTCTTCCTCCTCCCTCTCCTCGGTCCAGACACAGCAGAACTTGGCA
TCGATCAGTTGTTAGGCTTGGCTCAATACCGGAACGGAATGATATCGAAC
ATGGAACGCAAATCAATTCACGATGAGAGAACACAAAACTGACTGGTGTT
GTTCTGTGCTGTGCAGGTTTCAACGTCGAGACCGTCGAATACAAGAACAT
TCAGTTCACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCT
GGAGACACTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGC
AATGACCGTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTT
GAACGAGGATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGC
AAGATTTGCCGGTATGCTTGAAATCCACTTCTTGTGCAACAATGTGGGGG
CCGAAACAATGGATATTGACCGTGTGATTTCTTTTTCTTCTAGAACGCCA
TGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCACCCGC
CGTCCCTGGGTAAGTTATACCCCCCTCGCATGTCGACACCTGAGGTGTCT
ATTCCCGAGGATCGAACCCCAACTAACGCGCTTGCTTCCCTTTTCTAGTA
CATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGAGGGTCTGG
AGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAAACTGATCAT
CTAATGAGTGGAAGAATACCTGGAAGTTTGTGAACCTGGGAGTTGCGGAT
GCTGGATGGGGAACCGGGGCCGGCAAAGTCACCTCGTGTAGGGGAAAGGG
ATTATGCTTGCTAAACTTGGTGGTTCTTGTATGTTCTCTAACGGCTCTTC
ATTCCTCTATGCTATTAGCTTTTACTTTTTTTTATCATCTCTTTTGTCAC
CCTGGCGCCGCCCGATTCTTCTTTTTTTTTACGACTTCTTCTCTGCCTTG
ATGCTTCTCAACCGCATGCTGTTTCCTTACCTCCCCTGTCCTCTCGACTC
GACCTCGTGCTCGGAGCAGAATAAGGGAAGGAACGGAAACAAGAGACAAA
ATGGACAAAA
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Coding sequence (CDS) from alignment at KZ851924.1:59552..60911-

>M747DRAFT_297180-T1 ID=M747DRAFT_297180-T1|Name=M747DRAFT_297180-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2208bp|location=Sequence derived from alignment at KZ851924.1:59552..60911- (Aspergillus niger ATCC 13496)
TACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGAGGGTCT
GGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAAAACGCCA
TGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCACCCGC
CGTCCCTGGGTTTCAACGTCGAGACCGTCGAATACAAGAACATTCAGTTC
ACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGACA
CTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGACC
GTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACGAG
GATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGATTT
GCCGATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCA
AGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACC
ATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGAT
TGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGAGGGT
CTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAAAACGC
CATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCACCC
GCCGTCCCTGGGTTTCAACGTCGAGACCGTCGAATACAAGAACATTCAGT
TCACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGA
CACTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGA
CCGTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACG
AGGATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGAT
TTGCCGATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCG
CAAGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCA
CCATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACG
ATTGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGAGG
GTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAAAAC
GCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCAC
CCGCCGTCCCTGGGTTTCAACGTCGAGACCGTCGAATACAAGAACATTCA
GTTCACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGA
GACACTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCAAT
GACCGTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAA
CGAGGATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAG
ATTTGCCGATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGC
CGCAAGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAAC
CACCATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCA
CGATTGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGA
GGGTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAAA
ACGCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTC
ACCCGCCGTCCCTGGGTTTCAACGTCGAGACCGTCGAATACAAGAACATT
CAGTTCACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTG
GAGACACTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCA
ATGACCGTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTG
AACGAGGATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCA
AGATTTGCCGATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGG
GCCGCAAGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAA
ACCACCATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCC
CACGATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297180M747DRAFT_297180Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297180-T1M747DRAFT_297180-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297180-T1.cdsM747DRAFT_297180-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297180-T1.utr3p1M747DRAFT_297180-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297180-T1.exon4M747DRAFT_297180-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_297180-T1.exon3M747DRAFT_297180-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297180-T1.exon2M747DRAFT_297180-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297180-T1.exon1M747DRAFT_297180-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297180-T1.utr5p1M747DRAFT_297180-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
ProductARF/SAR superfamily
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851924.1supercontigKZ851924.1:59552..60911 -
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