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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851924.1:203995..205972- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_297224-T1 ID=M747DRAFT_297224-T1|Name=M747DRAFT_297224-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1978bp|location=Sequence derived from alignment at KZ851924.1:203995..205972- (Aspergillus niger ATCC 13496)
CATCCTCAAGCCAACCTCTCCTTAACCCAAATAATAAAACTTTCCTTACT
CACTCGGGATTCGATTGCCGTCGCATTTATATCGTCTACCGTGCATAACA
ACAATGGCGTCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCC
TCCGCTAAGCAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGC
GCATCTCGTTCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGAT
GGACAGGAATACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGGT
GTGTGCGCGCTCTTTCTCCAGCTGGGTGGTGTGATGTCTTGTAGTAGCTG
TTGAACTACTGCTACCTTTGTTTTTCTCTACTTTGCTGTTCCTCCCCGCC
CCCTTTTGTTTCCTTTCTGTGTCGACTCAACTGGTTATGGAACCTTCCTC
TCTTGTTGCAAATAGACCAAGACACACGTCTATCATTGCAGGGATTGTTT
GATTGGTTCGTGAAACTGATTGCTTGGTTGGCGCCGCTTGCGCCCGCCCG
GGGTGCCTCCAGGTCGATGAAGACTTGCTACAACAACAGCAAGAAGCATA
TAGAGTCCAGGGCGTCAATGAGGAGGAACAGATTACTGCGGCGCAGTTGA
GGAAGAAGCGCAAGCAACAGGCTACTACGGAAGAGGTTAGTCCAGCAGTT
TACGATGATGCTTCCTTGACTTGGCCCCAATGGCACTGAGATGGGCCTAA
AACTAAGAAGATATGAAATCGCGTAGGGCAATGGGCAACAGAAGCCTAAG
AAACAGCGCGTCAATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGC
TGAATTCGACGAAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCG
AGGAGATCGATAGCGGCCGACCGCGCATCAAGATGTACACCGATGAGAGC
GGAAACTTCAAAGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGT
CAATCTCGCGATACAGATGCTGGATGATTCCAACTTTAGGATTGGGGTAC
CCGGACCGCAGGGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAG
AGCCAGCAAGAGGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGAT
TATGCGACGGACACAGAAGTTGAACAGGTATGGGGGAACTACATTTGACC
TGGGATGATTGGGCTGGGCTTTGCTGATATACGCGTTTAGCAAACTTGCT
GACTGGGACGATGACGACCCGTCTGCCTTGCCGGATACGACTTCCCGTTT
TGATAAGATCGTGATCTTGAAACATATGTTCACGTTGAAGGAATTAGATG
TACGGGAGTATCCATCCCGCGCTAGGAGTGATTGGTAAAAGGAACTAACG
TTTGGTGTAGGAGGATCCTGCGGCCATTCTTGATATCAAGGAAGATATTC
GGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTCTACGAT
AAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGAGGCAGC
CAGGAGCTGTGTCAAGGTAAGCTTGATCATGGGATGACGATGGCCCAAAC
CCTCCGGAAAGGAACATATGCTGATGATACTGTTACATTTAGATGATGGA
TGGGCGGTTTTTCGCTGGCACCCGAGTCGATGCCTATATCGCGGATGGCA
GTGAGAGATTTAAGAAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTG
GCGGAGAAAGGATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGA
TGAGTTTGGCACGTGGTTGGAAAGCTCACATACGGTCGAGAACACGGCCA
AGTGATGGTGATGGTGGTGATGCTTTTTGGGATGTAATCATTATTAGGGG
GATCTGGAACTGGATGGGATGGGATGGGATGGGCGTAATCGTTTTCTGAG
GCTGGCTGGTCACTTTAGACAACCTAAG back to topCoding sequence (CDS) from alignment at KZ851924.1:203995..205972- >M747DRAFT_297224-T1 ID=M747DRAFT_297224-T1|Name=M747DRAFT_297224-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=7182bp|location=Sequence derived from alignment at KZ851924.1:203995..205972- (Aspergillus niger ATCC 13496)
ATGATGGATGGGCGGTTTTTCGCTGGCACCCGAGTCGATGCCTATATCGC
GGATGGCAGTGAGAGATTTAAGAAGACCAATGAGAAGCGTGCAGCACTGG
AAGATCTGGCGGAGAAAGGATTGGATGCGTCCGATGAAGAGGAGGAGCAG
CGATTGGATGAGTTTGGCACGTGGTTGGAAAGCTCACATACGGTCGAGAA
CACGGCCAAGTGAGAGGATCCTGCGGCCATTCTTGATATCAAGGAAGATA
TTCGGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTCTAC
GATAAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGAGGC
AGCCAGGAGCTGTGTCAAGCAAACTTGCTGACTGGGACGATGACGACCCG
TCTGCCTTGCCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAA
ACATATGTTCACGTTGAAGGAATTAGATGGCAATGGGCAACAGAAGCCTA
AGAAACAGCGCGTCAATACCGCGGTCTATGTGACTTCGATTCCTCTGGAT
GCTGAATTCGACGAAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGC
CGAGGAGATCGATAGCGGCCGACCGCGCATCAAGATGTACACCGATGAGA
GCGGAAACTTCAAAGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCC
GTCAATCTCGCGATACAGATGCTGGATGATTCCAACTTTAGGATTGGGGT
ACCCGGACCGCAGGGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCA
AGAGCCAGCAAGAGGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAG
ATTATGCGACGGACACAGAAGTTGAACAGGTCGATGAAGACTTGCTACAA
CAACAGCAAGAAGCATATAGAGTCCAGGGCGTCAATGAGGAGGAACAGAT
TACTGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCTACTACGGAAG
AGATGGCGTCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCT
CCGCTAAGCAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCG
CATCTCGTTCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATG
GACAGGAATACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGATG
ATGGATGGGCGGTTTTTCGCTGGCACCCGAGTCGATGCCTATATCGCGGA
TGGCAGTGAGAGATTTAAGAAGACCAATGAGAAGCGTGCAGCACTGGAAG
ATCTGGCGGAGAAAGGATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGA
TTGGATGAGTTTGGCACGTGGTTGGAAAGCTCACATACGGTCGAGAACAC
GGCCAAGTGAGAGGATCCTGCGGCCATTCTTGATATCAAGGAAGATATTC
GGGATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTCTACGAT
AAGGAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGAGGCAGC
CAGGAGCTGTGTCAAGCAAACTTGCTGACTGGGACGATGACGACCCGTCT
GCCTTGCCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACA
TATGTTCACGTTGAAGGAATTAGATGGCAATGGGCAACAGAAGCCTAAGA
AACAGCGCGTCAATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCT
GAATTCGACGAAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGA
GGAGATCGATAGCGGCCGACCGCGCATCAAGATGTACACCGATGAGAGCG
GAAACTTCAAAGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTC
AATCTCGCGATACAGATGCTGGATGATTCCAACTTTAGGATTGGGGTACC
CGGACCGCAGGGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGA
GCCAGCAAGAGGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATT
ATGCGACGGACACAGAAGTTGAACAGGTCGATGAAGACTTGCTACAACAA
CAGCAAGAAGCATATAGAGTCCAGGGCGTCAATGAGGAGGAACAGATTAC
TGCGGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCTACTACGGAAGAGA
TGGCGTCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCG
CTAAGCAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCAT
CTCGTTCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGAC
AGGAATACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGATGATG
GATGGGCGGTTTTTCGCTGGCACCCGAGTCGATGCCTATATCGCGGATGG
CAGTGAGAGATTTAAGAAGACCAATGAGAAGCGTGCAGCACTGGAAGATC
TGGCGGAGAAAGGATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGATTG
GATGAGTTTGGCACGTGGTTGGAAAGCTCACATACGGTCGAGAACACGGC
CAAGTGAGAGGATCCTGCGGCCATTCTTGATATCAAGGAAGATATTCGGG
ATGAGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTCTACGATAAG
GAACCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGAGGCAGCCAG
GAGCTGTGTCAAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCC
TTGCCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATAT
GTTCACGTTGAAGGAATTAGATGGCAATGGGCAACAGAAGCCTAAGAAAC
AGCGCGTCAATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAA
TTCGACGAAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGA
GATCGATAGCGGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAA
ACTTCAAAGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAAT
CTCGCGATACAGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGG
ACCGCAGGGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCC
AGCAAGAGGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATG
CGACGGACACAGAAGTTGAACAGGTCGATGAAGACTTGCTACAACAACAG
CAAGAAGCATATAGAGTCCAGGGCGTCAATGAGGAGGAACAGATTACTGC
GGCGCAGTTGAGGAAGAAGCGCAAGCAACAGGCTACTACGGAAGAGATGG
CGTCGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTA
AGCAACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTC
GTTCTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGG
AATACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGATGATGGAT
GGGCGGTTTTTCGCTGGCACCCGAGTCGATGCCTATATCGCGGATGGCAG
TGAGAGATTTAAGAAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTGG
CGGAGAAAGGATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGAT
GAGTTTGGCACGTGGTTGGAAAGCTCACATACGGTCGAGAACACGGCCAA
GTGAGAGGATCCTGCGGCCATTCTTGATATCAAGGAAGATATTCGGGATG
AGTGCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTCTACGATAAGGAA
CCCGAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGAGGCAGCCAGGAG
CTGTGTCAAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCCTTG
CCGGATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATATGTT
CACGTTGAAGGAATTAGATGGCAATGGGCAACAGAAGCCTAAGAAACAGC
GCGTCAATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTC
GACGAAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGAT
CGATAGCGGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACT
TCAAAGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTC
GCGATACAGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACC
GCAGGGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGC
AAGAGGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGA
CGGACACAGAAGTTGAACAGGTCGATGAAGACTTGCTACAACAACAGCAA
GAAGCATATAGAGTCCAGGGCGTCAATGAGGAGGAACAGATTACTGCGGC
GCAGTTGAGGAAGAAGCGCAAGCAACAGGCTACTACGGAAGAGATGGCGT
CGCATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAGC
AACTTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGTT
CTCGAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAAT
ACGAATATGATACGGTGCTAAAGAGATGGATTCCGACGATGATGGATGGG
CGGTTTTTCGCTGGCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGA
GAGATTTAAGAAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGG
AGAAAGGATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAG
TTTGGCACGTGGTTGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTG
AGAGGATCCTGCGGCCATTCTTGATATCAAGGAAGATATTCGGGATGAGT
GCTCGAAGCTGGGGGATGTGACCAACGTTGTTCTCTACGATAAGGAACCC
GAGGGAGTGGTGAGCGTTCGCTTTTCCGATCCCGAGGCAGCCAGGAGCTG
TGTCAAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCCTTGCCG
GATACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATATGTTCAC
GTTGAAGGAATTAGATGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCG
TCAATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCGAC
GAAATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGA
TAGCGGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTTCA
AAGGTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCG
ATACAGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCA
GGGACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAG
AGGCGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGACGG
ACACAGAAGTTGAACAGGTCGATGAAGACTTGCTACAACAACAGCAAGAA
GCATATAGAGTCCAGGGCGTCAATGAGGAGGAACAGATTACTGCGGCGCA
GTTGAGGAAGAAGCGCAAGCAACAGGCTACTACGGAAGAGATGGCGTCGC
ATGCTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAGCAAC
TTCCCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGTTCTC
GAAGCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAATACG
AATATGATACGGTGCTAAAGAGATGGATTCCGACGATGATGGATGGGCGG
TTTTTCGCTGGCACCCGAGTCGATGCCTATATCGCGGATGGCAGTGAGAG
ATTTAAGAAGACCAATGAGAAGCGTGCAGCACTGGAAGATCTGGCGGAGA
AAGGATTGGATGCGTCCGATGAAGAGGAGGAGCAGCGATTGGATGAGTTT
GGCACGTGGTTGGAAAGCTCACATACGGTCGAGAACACGGCCAAGTGAGA
GGATCCTGCGGCCATTCTTGATATCAAGGAAGATATTCGGGATGAGTGCT
CGAAGCTGGGGGATGTGACCAACGTTGTTCTCTACGATAAGGAACCCGAG
GGAGTGGTGAGCGTTCGCTTTTCCGATCCCGAGGCAGCCAGGAGCTGTGT
CAAGCAAACTTGCTGACTGGGACGATGACGACCCGTCTGCCTTGCCGGAT
ACGACTTCCCGTTTTGATAAGATCGTGATCTTGAAACATATGTTCACGTT
GAAGGAATTAGATGGCAATGGGCAACAGAAGCCTAAGAAACAGCGCGTCA
ATACCGCGGTCTATGTGACTTCGATTCCTCTGGATGCTGAATTCGACGAA
ATCCGCGACGTCTTCTCCAAGTGTGGTGTTATCGCCGAGGAGATCGATAG
CGGCCGACCGCGCATCAAGATGTACACCGATGAGAGCGGAAACTTCAAAG
GTGAAGCTCTCGTTGTGTACTTCCGGCCTGAGTCCGTCAATCTCGCGATA
CAGATGCTGGATGATTCCAACTTTAGGATTGGGGTACCCGGACCGCAGGG
ACCCATGCGAGTGCAACATGCGGATTTCTCGTTCAAGAGCCAGCAAGAGG
CGCCTACGAAGACTAGTATGAGGGATAAGAAGAAGATTATGCGACGGACA
CAGAAGTTGAACAGGTCGATGAAGACTTGCTACAACAACAGCAAGAAGCA
TATAGAGTCCAGGGCGTCAATGAGGAGGAACAGATTACTGCGGCGCAGTT
GAGGAAGAAGCGCAAGCAACAGGCTACTACGGAAGAGATGGCGTCGCATG
CTCCGAACGACGACGACCGCTCCAACAACCCTCCTCCGCTAAGCAACTTC
CCCCAAGATCCTTCGGAATTCGACAGCGACCCGCGCATCTCGTTCTCGAA
GCTAGACGACAAGTTCATTCTGGAAACGGAGGATGGACAGGAATACGAAT
ATGATACGGTGCTAAAGAGATGGATTCCGACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
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| GO:0000398 | mRNA splicing, via spliceosome |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034392 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | nuclear mRNA splicing factor-associated protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| KZ851924.1 | supercontig | KZ851924.1:203995..205972 - |
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