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M747DRAFT_297612-T1, M747DRAFT_297612-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297612-T1
Unique NameM747DRAFT_297612-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851927.1:254249..257286+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297612-T1 ID=M747DRAFT_297612-T1|Name=M747DRAFT_297612-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=3038bp|location=Sequence derived from alignment at KZ851927.1:254249..257286+ (Aspergillus niger ATCC 13496)
TCGTGTTCTCTGCGGACATCACGACTGACAGCTCATTCTTTCCTCGGTGG
ACTGCAAAGGAACATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGAG
TGCCTACTCCGCCCCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTCC
CGCAAACGCTCACCTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCTC
GCCCCCGGGTGATTCACTAAAAGACGGTGCGGATGCACCGCGCATCGATC
CTGAACGCGCGATTGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCAA
CATGAGAAGCAGGAGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGCA
GGCTGCGGCTAAAGCAGAATATGAGAAGCTTTTGAACATGCGATCGGGTG
GTACCTATATTCCTCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTACG
GACAAGACCAGCAAGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGAA
GTCGATCAACGGTCTCATCAACAAGGTCAACGTTTCCAACATCAAGTTTA
TCGTCCCGGAGCTTTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTTT
TGCAGAAGTATCATGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTAT
CTACGCCGCCATGGCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGCG
AGCTGTTGCTCAACCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAGA
AACGACAAGGCAGTCTGCATATCTTCCACGACCTTCATTGCCCATCTGTG
CAACCAGCAGGTCGCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTGC
TGCTTCACAAGCCCACGGATGACAGTGTCGAGATTGCTGTCGGCCTGACT
CGAGAGGTTGGTCAGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGGC
GGTGTTTGATCAATTCCGAAATATCCTTCACGAAGCCGACATCGACAAGC
GAGTACAGTATATGATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTAT
AAGGACAACCCGGCGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAGA
CCAAATAACGCATCAGATCGGACTCGATGACGAGATTGAGACACAAGATT
CCCTCAATATCTTCAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGCC
TACAAGAAATTGAAGGCAGAGATTCTGGGTGAAGGAAGTGATGACGAGGA
GGACGACGAAGACGAGTCAGACGAGAGCTCCGATGAAGAGTCGGAGGAAG
AGCGGAAGATGGACATTAAAGACCAGACCAACACAGACCTCGTGAACCTG
CGGAGGACGATATACCTGACGATCATGTCGAGTATCGATTTCGAAGAATG
CTGTCACAAGCTGATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAGC
TCCCGTCAATGATCATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAAG
TTCTACGGCTTGATCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGTC
CGATCTCTTCGAAGCTGCATTTGCCAAGTACTACGACACCATCCATCGCT
ACGAGACAAACCGACTCCGCAATATTGCCCGCTTCTTCGGCCATATGATT
AGCAATGACGCGATTGGCTGGCATGTCATGTCGATCATCCACATGAACGA
GGAGGAGACGACATCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAAG
ACCTCGGAGAACACCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGAC
GAGATCCTGCGTCCCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCCG
CAACACGCGCTTCTCAATCAACTACTTCACCAGTATCGGCATGGGTATGC
TGACGGAGGACATGCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGATG
CCTGCATTGCCCCAACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCGT
GGTATCTCACCCAACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCCC
GCTCCCGCTCCTACTCCTACTCCCGCTCTCCTTCCCCCGGCCGTGGCCGC
AGACGCTCCGTCAGCCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGATC
CTCACGCCGCAGCTACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCCC
CGGCGCCCAAATCCCGCCGACGCCCCGTCTCATACAGTCGATCCCCCCGC
AGAAGATCCTCCGTGTCCCCAACACCCCCTCCTCGCCGGACACGCGATCG
CTCCTACGATTCCCGCTCTCCCAGACGCTCGCTCTCCCGGTCCGTCACCC
CTCCGCCTCGCAGCAAGCGAGATACCCACGCCCGCCGAGACAGAAGCTAC
TCCAGATCCGTCTCCCGATCTGTCTCCCCTCCTCCACGTCAGGCTGCCGG
AGGTGCCGCTCGGTACTCGGAGTCTCCTCCTCCCCGCCGGCGGGTCGAAA
GGAGCGTCTCCGCGTCTCGCTCTCCTTCCCGTTCTCGTTCTCGTACTCCG
GAGCGTCGTGCCCCGCCTGGTCGTCGTGCCCCCCGTGATGCTTCAGTCTC
GCGCTCGCGCTCCCCTACCCCGCCGCGCGGTGGTGGTCGTCGTGGCGATG
CTCCCCCTCGTCGTCGTCGCTACTCTGACTCGTTGTCTCCGTCGCGGTCT
CCGCCGCCGAGACGGCACAGGTCTCCGTCTAGAACGCCTCCCCGTCGGGT
GCGCGATTAGGGTGGGAATAGGATGTATGTAATAGGTGATAGGGAGAGAG
AGAAGAGTGCTTTTAGATGAAATTTTTTGCAGGGTATATGTTTAGGTTTG
GCATTGGTTGTTCTATACCGGATTGAAACCAAGATTTTCCAAGTTCAAGG
AAGGGGTTCTTTATTTTATATTAATTAAGGATGTATTGATATATACTCAT
TTCGCCTGGATGTATTGCAAACGGACACGAAAGTATATCATCAGTATACA
AGTAAGAGAAATAAGTGTTATCATATGGACTAGGTAGC
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Coding sequence (CDS) from alignment at KZ851927.1:254249..257286+

>M747DRAFT_297612-T1 ID=M747DRAFT_297612-T1|Name=M747DRAFT_297612-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2697bp|location=Sequence derived from alignment at KZ851927.1:254249..257286+ (Aspergillus niger ATCC 13496)
ATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGAGTGCCTACTCCGCC
CCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTCCCGCAAACGCTCAC
CTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCTCGCCCCCGGGTGAT
TCACTAAAAGACGGTGCGGATGCACCGCGCATCGATCCTGAACGCGCGAT
TGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCAACATGAGAAGCAGG
AGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGCAGGCTGCGGCTAAA
GCAGAATATGAGAAGCTTTTGAACATGCGATCGGGTGGTACCTATATTCC
TCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTACGGACAAGACCAGCA
AGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGAAGTCGATCAACGGT
CTCATCAACAAGGTCAACGTTTCCAACATCAAGTTTATCGTCCCGGAGCT
TTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTTTTGCAGAAGTATCA
TGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTATCTACGCCGCCATG
GCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGCGAGCTGTTGCTCAA
CCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAGAAACGACAAGGCAG
TCTGCATATCTTCCACGACCTTCATTGCCCATCTGTGCAACCAGCAGGTC
GCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTGCTGCTTCACAAGCC
CACGGATGACAGTGTCGAGATTGCTGTCGGCCTGACTCGAGAGGTTGGTC
AGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGGCGGTGTTTGATCAA
TTCCGAAATATCCTTCACGAAGCCGACATCGACAAGCGAGTACAGTATAT
GATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTATAAGGACAACCCGG
CGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAGACCAAATAACGCAT
CAGATCGGACTCGATGACGAGATTGAGACACAAGATTCCCTCAATATCTT
CAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGCCTACAAGAAATTGA
AGGCAGAGATTCTGGGTGAAGGAAGTGATGACGAGGAGGACGACGAAGAC
GAGTCAGACGAGAGCTCCGATGAAGAGTCGGAGGAAGAGCGGAAGATGGA
CATTAAAGACCAGACCAACACAGACCTCGTGAACCTGCGGAGGACGATAT
ACCTGACGATCATGTCGAGTATCGATTTCGAAGAATGCTGTCACAAGCTG
ATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAGCTCCCGTCAATGAT
CATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAAGTTCTACGGCTTGA
TCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGTCCGATCTCTTCGAA
GCTGCATTTGCCAAGTACTACGACACCATCCATCGCTACGAGACAAACCG
ACTCCGCAATATTGCCCGCTTCTTCGGCCATATGATTAGCAATGACGCGA
TTGGCTGGCATGTCATGTCGATCATCCACATGAACGAGGAGGAGACGACA
TCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAAGACCTCGGAGAACA
CCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGACGAGATCCTGCGTC
CCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCCGCAACACGCGCTTC
TCAATCAACTACTTCACCAGTATCGGCATGGGTATGCTGACGGAGGACAT
GCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGATGCCTGCATTGCCCC
AACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCGTGGTATCTCACCCA
ACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCCCGCTCCCGCTCCTA
CTCCTACTCCCGCTCTCCTTCCCCCGGCCGTGGCCGCAGACGCTCCGTCA
GCCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGATCCTCACGCCGCAGC
TACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCCCCGGCGCCCAAATC
CCGCCGACGCCCCGTCTCATACAGTCGATCCCCCCGCAGAAGATCCTCCG
TGTCCCCAACACCCCCTCCTCGCCGGACACGCGATCGCTCCTACGATTCC
CGCTCTCCCAGACGCTCGCTCTCCCGGTCCGTCACCCCTCCGCCTCGCAG
CAAGCGAGATACCCACGCCCGCCGAGACAGAAGCTACTCCAGATCCGTCT
CCCGATCTGTCTCCCCTCCTCCACGTCAGGCTGCCGGAGGTGCCGCTCGG
TACTCGGAGTCTCCTCCTCCCCGCCGGCGGGTCGAAAGGAGCGTCTCCGC
GTCTCGCTCTCCTTCCCGTTCTCGTTCTCGTACTCCGGAGCGTCGTGCCC
CGCCTGGTCGTCGTGCCCCCCGTGATGCTTCAGTCTCGCGCTCGCGCTCC
CCTACCCCGCCGCGCGGTGGTGGTCGTCGTGGCGATGCTCCCCCTCGTCG
TCGTCGCTACTCTGACTCGTTGTCTCCGTCGCGGTCTCCGCCGCCGAGAC
GGCACAGGTCTCCGTCTAGAACGCCTCCCCGTCGGGTGCGCGATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC22M747DRAFT_297612Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297612-T1.utr5p1M747DRAFT_297612-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297612-T1.exon1M747DRAFT_297612-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297612-T1.cdsM747DRAFT_297612-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297612-T1.utr3p1M747DRAFT_297612-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297612-T1M747DRAFT_297612-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263WM5
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR016021
DBxrefInterPro:IPR003890
DBxrefInterPro:IPR003891
DBxrefPFAM:PF02847
Productpre-mRNA-splicing factor cwc22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851927.1supercontigKZ851927.1:254249..257286 +
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