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M747DRAFT_297750-T1, M747DRAFT_297750-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297750-T1
Unique NameM747DRAFT_297750-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851928.1:314011..316087-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297750-T1 ID=M747DRAFT_297750-T1|Name=M747DRAFT_297750-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2077bp|location=Sequence derived from alignment at KZ851928.1:314011..316087- (Aspergillus niger ATCC 13496)
ACGACAATTGCTCCGCCCGCGTTCATCCCTCTCTCCTCCCAGACTCCCAA
CATGGCTGAGCAGCTCGTCCTTCGCGGTACCCTTGAGGGTCACAATGGCT
GGGTTACCTGCCTGGCTACCTCTCTGGAGAAGTAAGGCAACACTACACTA
CACCGAATTGAAGACATGAAACAAATGCGTTTTGTTGCGAAAATCGAACA
AGGTGTGCATGTGCTACCGAACAAGTGGTATATGGATGCATTGTTGCGAG
AAAAGAAAATGATCGCATTGGTTGAAACATGAAATATTCATATATCAAAT
GGACAAAACTGGGTTCTGACTTTATGTTTTTCTTCCTCGATTATAGCCCC
AACATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGAACCT
GACCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTC
ACTCTCACATCGTCTCTGACTGTGTATGCCCTCCGAATTACTCCGTCCCC
ACCATGTCCCAGTCCAGACAAGAAAAGACTTTCCCCACAGACGAAGGACG
AAGCCCGATCGAAACCTACGAGAAGGCGGGACTGGGCAAAGAATAAAAAG
GAAGATGATTTGGCTGACCGTGCATGGGGATTTATAGGTGATCTCCTCCG
ACGGTGCCTACGCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCTGTGG
GAGCTCTCCACTGGTGAGACCACCCGGACCTTCGTCGGCCACACCAACGA
CGTCCTCTCCGTTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCCGCTT
CCCGTGACCGCTCCATCAAGCTCTGGAACACCCTTGGTGACTGCAAGTTC
ACCATCACCGACAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCTTCAG
CCCCAACCCCCAGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAGCTCG
TCAAGGTACGTTATGACTCGACTCCCGCATACCCAAGTTTATATCATTCG
CAATCTCGACTCGTCCAGAAGATGTTTTTGCATAAACGTATTTGCTACTT
CAGAGCCTTTCACGGCCATGAGACAAACATTCACCAATGCCCTGATGGAC
AATCAATAAACATATCTTGTTTATGTTGTTATTGCTTTTATTGCTTTTCC
ACCGAGAACTTCAACTTGAAGAATCTTATCTCTGTGGAGTCATGAAGCTA
ACATGCAAAACAACTAGGTTTGGGAGCTCGCTTCCTGCCGTCTCCAGACC
GACCACATCGGTCACACCGGCTACATCAACGCCGTCACCATCTCCCCCGA
TGGATCCCTCTGCGCCTCCGGTGGCAAGGACGGCACCACCATGCTCTGGG
ACCTTAACGAGTCCAAGCACCTCTACTCCCTCCACGCCGGTGACGAGATC
CACGCCCTCGTCTTCTCCCCCAACCGTTACTGGCTCTGCGCTGCCACCTC
CAGCAGCATCACCATCTTCGACCTCGAGAAGAAGAGCAAGGTTGACGAGC
TCAAGCCCGAGTACATCGAGAAGGGCAAGAAGAGCCGCGAGCCCGAGTGT
GTCAGCTTGGCCTGGAGCGCTGACGGCCAGACTCTGTTCGCTGGTTACAC
CGACAACAAGATCCGCGCTTGGGGTGTCATGTCGAGGGCATAGATTGATA
CCCATCAAGTTATCAAGGGACGGTGTTGAGTTTTAGCGGAGGAGAGAAAT
CAAATAACAAAGATATCTGTTTTTTATTTTTTCCTTTTCCAAACAACAAA
AAGGGCAGGCATTGGTTGGGATGTATGAGCCATGAGCAATGAAAGCACCT
CGGAGGGAGGGGCATTTCCCCCCATTCCTCCCGGGTTTTCACCTTGAACA
TGTCTAGCTTACTCGAGATTTCGTTTCATAAAATCCGAATTGTCTGGAAT
CTTGTGAAAGGGATGACATGCAAAATGTTCTAATACCATTTTAAAAGACT
GTTAAAAAGTTACCCTATCACCGTCGGAGACATCGTAGACATACCGTACT
ACTACTATCTTTGGTAGCTCCGATGCGAGGGGGGGTGGATCATAACTACT
GGATAGTACTATGGCAACAGTCTGTGG
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Coding sequence (CDS) from alignment at KZ851928.1:314011..316087-

>M747DRAFT_297750-T1 ID=M747DRAFT_297750-T1|Name=M747DRAFT_297750-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3804bp|location=Sequence derived from alignment at KZ851928.1:314011..316087- (Aspergillus niger ATCC 13496)
GTTTGGGAGCTCGCTTCCTGCCGTCTCCAGACCGACCACATCGGTCACAC
CGGCTACATCAACGCCGTCACCATCTCCCCCGATGGATCCCTCTGCGCCT
CCGGTGGCAAGGACGGCACCACCATGCTCTGGGACCTTAACGAGTCCAAG
CACCTCTACTCCCTCCACGCCGGTGACGAGATCCACGCCCTCGTCTTCTC
CCCCAACCGTTACTGGCTCTGCGCTGCCACCTCCAGCAGCATCACCATCT
TCGACCTCGAGAAGAAGAGCAAGGTTGACGAGCTCAAGCCCGAGTACATC
GAGAAGGGCAAGAAGAGCCGCGAGCCCGAGTGTGTCAGCTTGGCCTGGAG
CGCTGACGGCCAGACTCTGTTCGCTGGTTACACCGACAACAAGATCCGCG
CTTGGGGTGTCATGTCGAGGGCATAGGTGATCTCCTCCGACGGTGCCTAC
GCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCTGTGGGAGCTCTCCAC
TGGTGAGACCACCCGGACCTTCGTCGGCCACACCAACGACGTCCTCTCCG
TTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCCGCTTCCCGTGACCGC
TCCATCAAGCTCTGGAACACCCTTGGTGACTGCAAGTTCACCATCACCGA
CAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCTTCAGCCCCAACCCCC
AGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAGCTCGTCAAGCCCCAA
CATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGAACCTGA
CCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTCAC
TCTCACATCGTCTCTGACTGTATGGCTGAGCAGCTCGTCCTTCGCGGTAC
CCTTGAGGGTCACAATGGCTGGGTTACCTGCCTGGCTACCTCTCTGGAGA
AGTTTGGGAGCTCGCTTCCTGCCGTCTCCAGACCGACCACATCGGTCACA
CCGGCTACATCAACGCCGTCACCATCTCCCCCGATGGATCCCTCTGCGCC
TCCGGTGGCAAGGACGGCACCACCATGCTCTGGGACCTTAACGAGTCCAA
GCACCTCTACTCCCTCCACGCCGGTGACGAGATCCACGCCCTCGTCTTCT
CCCCCAACCGTTACTGGCTCTGCGCTGCCACCTCCAGCAGCATCACCATC
TTCGACCTCGAGAAGAAGAGCAAGGTTGACGAGCTCAAGCCCGAGTACAT
CGAGAAGGGCAAGAAGAGCCGCGAGCCCGAGTGTGTCAGCTTGGCCTGGA
GCGCTGACGGCCAGACTCTGTTCGCTGGTTACACCGACAACAAGATCCGC
GCTTGGGGTGTCATGTCGAGGGCATAGGTGATCTCCTCCGACGGTGCCTA
CGCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCTGTGGGAGCTCTCCA
CTGGTGAGACCACCCGGACCTTCGTCGGCCACACCAACGACGTCCTCTCC
GTTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCCGCTTCCCGTGACCG
CTCCATCAAGCTCTGGAACACCCTTGGTGACTGCAAGTTCACCATCACCG
ACAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCTTCAGCCCCAACCCC
CAGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAGCTCGTCAAGCCCCA
ACATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGAACCTG
ACCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTCA
CTCTCACATCGTCTCTGACTGTATGGCTGAGCAGCTCGTCCTTCGCGGTA
CCCTTGAGGGTCACAATGGCTGGGTTACCTGCCTGGCTACCTCTCTGGAG
AAGTTTGGGAGCTCGCTTCCTGCCGTCTCCAGACCGACCACATCGGTCAC
ACCGGCTACATCAACGCCGTCACCATCTCCCCCGATGGATCCCTCTGCGC
CTCCGGTGGCAAGGACGGCACCACCATGCTCTGGGACCTTAACGAGTCCA
AGCACCTCTACTCCCTCCACGCCGGTGACGAGATCCACGCCCTCGTCTTC
TCCCCCAACCGTTACTGGCTCTGCGCTGCCACCTCCAGCAGCATCACCAT
CTTCGACCTCGAGAAGAAGAGCAAGGTTGACGAGCTCAAGCCCGAGTACA
TCGAGAAGGGCAAGAAGAGCCGCGAGCCCGAGTGTGTCAGCTTGGCCTGG
AGCGCTGACGGCCAGACTCTGTTCGCTGGTTACACCGACAACAAGATCCG
CGCTTGGGGTGTCATGTCGAGGGCATAGGTGATCTCCTCCGACGGTGCCT
ACGCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCTGTGGGAGCTCTCC
ACTGGTGAGACCACCCGGACCTTCGTCGGCCACACCAACGACGTCCTCTC
CGTTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCCGCTTCCCGTGACC
GCTCCATCAAGCTCTGGAACACCCTTGGTGACTGCAAGTTCACCATCACC
GACAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCTTCAGCCCCAACCC
CCAGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAGCTCGTCAAGCCCC
AACATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGAACCT
GACCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGTC
ACTCTCACATCGTCTCTGACTGTATGGCTGAGCAGCTCGTCCTTCGCGGT
ACCCTTGAGGGTCACAATGGCTGGGTTACCTGCCTGGCTACCTCTCTGGA
GAAGTTTGGGAGCTCGCTTCCTGCCGTCTCCAGACCGACCACATCGGTCA
CACCGGCTACATCAACGCCGTCACCATCTCCCCCGATGGATCCCTCTGCG
CCTCCGGTGGCAAGGACGGCACCACCATGCTCTGGGACCTTAACGAGTCC
AAGCACCTCTACTCCCTCCACGCCGGTGACGAGATCCACGCCCTCGTCTT
CTCCCCCAACCGTTACTGGCTCTGCGCTGCCACCTCCAGCAGCATCACCA
TCTTCGACCTCGAGAAGAAGAGCAAGGTTGACGAGCTCAAGCCCGAGTAC
ATCGAGAAGGGCAAGAAGAGCCGCGAGCCCGAGTGTGTCAGCTTGGCCTG
GAGCGCTGACGGCCAGACTCTGTTCGCTGGTTACACCGACAACAAGATCC
GCGCTTGGGGTGTCATGTCGAGGGCATAGGTGATCTCCTCCGACGGTGCC
TACGCTCTGTCCTCCTCCTGGGACAAGTCCCTCCGCCTGTGGGAGCTCTC
CACTGGTGAGACCACCCGGACCTTCGTCGGCCACACCAACGACGTCCTCT
CCGTTTCTTTCTCCGCCGACAACCGCCAGATTGTCTCCGCTTCCCGTGAC
CGCTCCATCAAGCTCTGGAACACCCTTGGTGACTGCAAGTTCACCATCAC
CGACAAGGGCCACACCGAGTGGGTTTCCTGCGTTCGCTTCAGCCCCAACC
CCCAGAACCCCGTCATCGTCTCCGCTGGTTGGGACAAGCTCGTCAAGCCC
CAACATGCTGCTCTCTGGCAGTCGCGACAAGACCCTGATCATCTGGAACC
TGACCCGCGACGAGCAGGCCTACGGTTACCCCAAGCGCAGCCTTGAGGGT
CACTCTCACATCGTCTCTGACTGTATGGCTGAGCAGCTCGTCCTTCGCGG
TACCCTTGAGGGTCACAATGGCTGGGTTACCTGCCTGGCTACCTCTCTGG
AGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CPC2M747DRAFT_297750Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297750-T1M747DRAFT_297750-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297750-T1.cdsM747DRAFT_297750-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297750-T1.utr3p1M747DRAFT_297750-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297750-T1.exon4M747DRAFT_297750-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_297750-T1.exon3M747DRAFT_297750-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_297750-T1.exon2M747DRAFT_297750-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297750-T1.exon1M747DRAFT_297750-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297750-T1.utr5p1M747DRAFT_297750-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092636T6
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Productcross-pathway control WD-repeat protein cpc2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851928.1supercontigKZ851928.1:314011..316087 -
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