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M747DRAFT_297840-T1, M747DRAFT_297840-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297840-T1
Unique NameM747DRAFT_297840-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851929.1:148001..150089-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297840-T1 ID=M747DRAFT_297840-T1|Name=M747DRAFT_297840-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2089bp|location=Sequence derived from alignment at KZ851929.1:148001..150089- (Aspergillus niger ATCC 13496)
ACTGGTCCCTCGCTGCACCCGCATTGCTCCACCGTCTCTCACTTGTATAT
CGCCGCCGTTGCGCCTTGCCACATTCCCTCATATACTAATAATACACTGC
ACCCTCCTTGTGTCATACATCATTTCGTGCACCCGCATACCACCTTCCAA
ACTTTCTTTAAGCTCATCCCCCTTCAGAAGACCGAAGTCGTTGCACCTGC
ACAGCACCCCTACATATTGCATTCAATACTACCCACAGACACTAAACTAT
ACCCTGCACAGGTGGAAGAGTCGAAGTACCTCCCGCACCGTCTCGAAAGG
ATCATCTCATTGAAGAAACCGAAGACATGAGATCCCAGGGTAACATGTCC
GATCGCCTGACCATCGAAGTCGACTGTACCTCCTTGGGTTCCAACGAGTG
CCCCTCCATGGCTTCCAGCTTCTCACCCATGGAATCACCTACGCCTACTC
CAACAAGTGTGTACAGCCAAGGCTCTTTGGCTTCGCCCACCTGGCACGAA
GGGGGCTCGTATCCGGGACAAGGCTATGAAAGGCATACCGGAACGACGCC
AATGCGCAGTGCCTTTCGACTGGCCAGCATGACATCCAACGATAGTATGG
GCATGTCCTATGGGCAAATGGAGGCACAAGAGCGGATGCCAATGACCGAC
TTTCTCTCAGGATATGATGAGAACGTTGAACATTTCTGGATCCCCCAAGA
GGCACAGAAAGCCTATGAACATGGCGTCCCTGGACTCCCATACCCTCAGG
CAATGCCTCAGTATTCCACTATGGGCCGTAGCAGCTATCGACAACACGCT
GCACCCTACCTGCCCGATTCCGCAACCAACCCCTGTCTGTCGCGGTCGAT
TTTCCATCAGCCTGAAAGGGTTCCCAACTCAATGTCTATGGGCAATGTGA
TACCTTGGATGGCCCCGCAGCCAGACTCAATTGCCCCGCAAACTATTGCC
CCGTCGCAGGTTGCCCCAGTCACCCCCCCGCCGTCATACTCGGAATTTTC
AGGCTCAATCAATACCTTCAAGACGCACAGCCCGACCACTCCAGTGCGTT
CCTGCTCATTGGGGACTACCTCTGGGACCGATACACCCATGAGCCGCCTC
TCAGGCGGCATGGACTACCTGGATGACTTCAACCAATCGCCAGTTTATCG
CGACAATCTCGCCCGAGTCCAGCGCCAGCCCTCCAGGAAAGTTGCTCGGA
AGCAGTCGTCAAAGCAGAGCCTGAGCTTGGAAAACCTTCCGTCCATCATC
AAGCAAGTCCAATTTAAGTGCAAGGAGCCTGGTTGCAAGGGTCGCTTCAA
GAGACAAGAGCATCTGAAGCGGCACATGAAGAGCCACTCTAAGGAAAAGC
CGCATGTATGCTGGGTTCCTGGCTGCGAACGGGCTTTCTCGCGCAGTGAC
AACCTGAACGCGCATTACACGAAGACCCACAGCAAGCGCGGCGGCCGTAA
TCGCTATGTCGCGACGCTAGACGAGAACAGCCCAGACTACAACCCCGAAT
ACCGCGGCCAATTAACCGCTGATGGGCGACCAGTCTACAACTCCAAGTCC
CAAGATCTCATGCCCGATGCTCGTGAGACGAGCGAGGAGGCGTGGTTGGA
GTAAGCGGATATAGAGTTTAATACGGGAAGGACCGAAACATGATACCCTT
GGGCACCTGAGTTGCCCGTTCCCTTTTGGGTCATTAGATGGGCACAGACA
CAGGGCCCGACAGACCCCGGTCGGCGCTTCACGGCGTTCTTTGTAAAACA
TTTTCTGGCTATATACACCGGACGATTTCCTTTGTTAATTTGAATGTTGC
ATACCTTTCCTTTGTGTTTTCCTTCATGATCTTATATTCTCCCCACCCAT
CTGGGCCCAAAATCTCTTATGCTTTGGAGAGGCACTTCTCATTCCATTTC
TTTCTCTTTCTTCTTTCATTTTTTTTTCTTCTTTCAAAAAGAAAACCTAC
CATTGGATAATAATGCGTTGAGACGGATTGGCTAAAACGGCATGGAAAGG
AATGGTTTGTACACGATGGGAGTGATCTGACTGCGTTCTTTTCAATCTGA
TTGGTCTCATCCACTACTGAACACTATACGAGATACCTA
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Coding sequence (CDS) from alignment at KZ851929.1:148001..150089-

>M747DRAFT_297840-T1 ID=M747DRAFT_297840-T1|Name=M747DRAFT_297840-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1260bp|location=Sequence derived from alignment at KZ851929.1:148001..150089- (Aspergillus niger ATCC 13496)
ATGTCCGATCGCCTGACCATCGAAGTCGACTGTACCTCCTTGGGTTCCAA
CGAGTGCCCCTCCATGGCTTCCAGCTTCTCACCCATGGAATCACCTACGC
CTACTCCAACAAGTGTGTACAGCCAAGGCTCTTTGGCTTCGCCCACCTGG
CACGAAGGGGGCTCGTATCCGGGACAAGGCTATGAAAGGCATACCGGAAC
GACGCCAATGCGCAGTGCCTTTCGACTGGCCAGCATGACATCCAACGATA
GTATGGGCATGTCCTATGGGCAAATGGAGGCACAAGAGCGGATGCCAATG
ACCGACTTTCTCTCAGGATATGATGAGAACGTTGAACATTTCTGGATCCC
CCAAGAGGCACAGAAAGCCTATGAACATGGCGTCCCTGGACTCCCATACC
CTCAGGCAATGCCTCAGTATTCCACTATGGGCCGTAGCAGCTATCGACAA
CACGCTGCACCCTACCTGCCCGATTCCGCAACCAACCCCTGTCTGTCGCG
GTCGATTTTCCATCAGCCTGAAAGGGTTCCCAACTCAATGTCTATGGGCA
ATGTGATACCTTGGATGGCCCCGCAGCCAGACTCAATTGCCCCGCAAACT
ATTGCCCCGTCGCAGGTTGCCCCAGTCACCCCCCCGCCGTCATACTCGGA
ATTTTCAGGCTCAATCAATACCTTCAAGACGCACAGCCCGACCACTCCAG
TGCGTTCCTGCTCATTGGGGACTACCTCTGGGACCGATACACCCATGAGC
CGCCTCTCAGGCGGCATGGACTACCTGGATGACTTCAACCAATCGCCAGT
TTATCGCGACAATCTCGCCCGAGTCCAGCGCCAGCCCTCCAGGAAAGTTG
CTCGGAAGCAGTCGTCAAAGCAGAGCCTGAGCTTGGAAAACCTTCCGTCC
ATCATCAAGCAAGTCCAATTTAAGTGCAAGGAGCCTGGTTGCAAGGGTCG
CTTCAAGAGACAAGAGCATCTGAAGCGGCACATGAAGAGCCACTCTAAGG
AAAAGCCGCATGTATGCTGGGTTCCTGGCTGCGAACGGGCTTTCTCGCGC
AGTGACAACCTGAACGCGCATTACACGAAGACCCACAGCAAGCGCGGCGG
CCGTAATCGCTATGTCGCGACGCTAGACGAGAACAGCCCAGACTACAACC
CCGAATACCGCGGCCAATTAACCGCTGATGGGCGACCAGTCTACAACTCC
AAGTCCCAAGATCTCATGCCCGATGCTCGTGAGACGAGCGAGGAGGCGTG
GTTGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297840M747DRAFT_297840Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297840-T1.cdsM747DRAFT_297840-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297840-T1.utr3p1M747DRAFT_297840-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297840-T1.exon1M747DRAFT_297840-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297840-T1.utr5p1M747DRAFT_297840-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297840-T1M747DRAFT_297840-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851929.1supercontigKZ851929.1:148001..150089 -
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