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M747DRAFT_298057-T1, M747DRAFT_298057-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298057-T1
Unique NameM747DRAFT_298057-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851931.1:139473..141450-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298057-T1 ID=M747DRAFT_298057-T1|Name=M747DRAFT_298057-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1978bp|location=Sequence derived from alignment at KZ851931.1:139473..141450- (Aspergillus niger ATCC 13496)
CTTTTCGCGACCGGCTCCAGATCTTACTTATTGAGCTGTCTTTCTTCGCC CCTCTCTTCGATCCCATCACTAGTCTGTTGGTCGCTCTGCTGATATCCGT GGGTGAGTGGAGCATTCATTTGTCTCTCCGATCATGGCGGACATATCAGG CAACATGCTGAAGCGGCCTCACCCCGAGGACCAAGACAACAATACTCAGA AAAGACCTCGTTCCAATCATGGATCTCCAGTGCCAGCTCAGGGCGCACCT GCCGCGGGCAAGGTTGATATTGAGAAGATGGTGGCCGAAGCAAGGGCAAA AGCAGAAGCTGTGCGTGCCAGACTTCAAGCGGCAAAGGGTATATCGCCAT CACCTACACCGGCTGCATCAAGTGCCAGCCCTACACCACCTGCCGCCAGT CCAGCCATGTCGAGATTGGAACAAATGAAAGCTAGAGTGGCAGCAGCGAC CAGTCGCGCCAACGCTGCTCCTCCGCAACGACCCGTCCCCACGCCGACTC CTCAACCTCCCCCATTCGAAGATGAAGATGATGGCTCGTCGCGAGCTCGA GGTGGTCTGGATGTCGGTCTTCACCCTGCTTTGCTCTCCGATACACTCGA CTTTCGGGGTGCGAAAGGACGGCCAGCTTCCCAAAATAAAAACCGACGTA CAGAATCACCAGCTACCGCGGGGAGGCCAGATCGAGCTGGACTTGATCTA TCGGGGCCGTCTATAGAGGAAATTAAGAACAATCCATACTTTGATCCGAA CCTTGGTCCGAAGGCAACAGTTGCAAAGCCCCGACAAACACGACAGCTCA TCTTCAACCAGAAGGGCAAATATATACAGCAGGCCGCCGCTCTCCGTCGG CAGGCTCAGTTGGAAGCTATGAAGAAGCGGATTGCGGAAAGAGCGCGGCA AGCGGGTATTGATGAAGACTTGGATGTTGAAAAGGCCTTCCTCGTGCCGG CCCCTCCCGCAATTGAATGGTGGGACGAAGGCCTAGTAGACGGCGAGGAC TATTCGGGCATTGAAAATGAACAGAACCTCAAAATTGACACGCCTGACTC GATCATCACGCAATACGTACAACATCCAGTTCTTCTCGATCCTCCGCAGG AAAAGCTACTACCAGCACAGAAGCCTATGTATCTTACGCCAAAGGAACAG GCGAAGATCCGTCGCCAGCGCCGCATGGCAGATCTGAAGGAACAACAAGC CAAGATCCGACTGGGTCTCGAGCCAGCACCTCCACCGAAGGTCAAGAAAT CGAACCTGATGCGAGTCCTGGGTGAACAAGCCGTCAAGGATCCCACGGCC GTGGAGGCACGCGTGAACCGGGAAATCGCAGAACGTCGAGAAAAGCACGA GACTGCGAATGCGGAGCGCAAACTCACCAAAGAAGAACGCCGAGAGAAGC TTGCTCGGCAACAGGAGGCCGATGCCGAGAAAGGTATCCAAATGACCGTT TATCGAATCGACAGCCTCGCCAACGGGCGGAACCGCTTCAAAATCAGCAA GAATGCTGAACAGAACGCTCTCACAGGGGTATGCGTCATGCACCCTCGCT TCAACCTCGTGATTGTCGAGGGAGGCTCCCACTCTATCAACAACTACAGA AAGCTCATGATGAACCGGATTGACTGGACTGAGAACGCAGGCCCGAACGC GGTGCGCGAGGGCAACCGCGAGGCCCAAGCCGCCTGGCTAGCAGCTGAAG ATGAGCAAACAGGGGAACTGAAAGATCTTAGTTCCAATACCTGCGAACTC GTCTGGGAAGGTCAGGTCAAAGCCCGCGCGTTCCGGAAATGGCTGGGGGC GCGAGTGTGTGAAACGGATTCCCAAGCTAAGGATGTCTTGGCCCGCGCGA AGCTGGAGAATTTCTGGGTTTTGGCGAAGAGTGCCAAACAGAACGAGTCG TGAGATCGATTTCACACGGCATGGCATGGCATAGCATTATCACGCTTTCT AATTACAATTTACTCTTCTGTATCATAA
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Coding sequence (CDS) from alignment at KZ851931.1:139473..141450-

>M747DRAFT_298057-T1 ID=M747DRAFT_298057-T1|Name=M747DRAFT_298057-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1770bp|location=Sequence derived from alignment at KZ851931.1:139473..141450- (Aspergillus niger ATCC 13496)
ATGGCGGACATATCAGGCAACATGCTGAAGCGGCCTCACCCCGAGGACCA
AGACAACAATACTCAGAAAAGACCTCGTTCCAATCATGGATCTCCAGTGC
CAGCTCAGGGCGCACCTGCCGCGGGCAAGGTTGATATTGAGAAGATGGTG
GCCGAAGCAAGGGCAAAAGCAGAAGCTGTGCGTGCCAGACTTCAAGCGGC
AAAGGGTATATCGCCATCACCTACACCGGCTGCATCAAGTGCCAGCCCTA
CACCACCTGCCGCCAGTCCAGCCATGTCGAGATTGGAACAAATGAAAGCT
AGAGTGGCAGCAGCGACCAGTCGCGCCAACGCTGCTCCTCCGCAACGACC
CGTCCCCACGCCGACTCCTCAACCTCCCCCATTCGAAGATGAAGATGATG
GCTCGTCGCGAGCTCGAGGTGGTCTGGATGTCGGTCTTCACCCTGCTTTG
CTCTCCGATACACTCGACTTTCGGGGTGCGAAAGGACGGCCAGCTTCCCA
AAATAAAAACCGACGTACAGAATCACCAGCTACCGCGGGGAGGCCAGATC
GAGCTGGACTTGATCTATCGGGGCCGTCTATAGAGGAAATTAAGAACAAT
CCATACTTTGATCCGAACCTTGGTCCGAAGGCAACAGTTGCAAAGCCCCG
ACAAACACGACAGCTCATCTTCAACCAGAAGGGCAAATATATACAGCAGG
CCGCCGCTCTCCGTCGGCAGGCTCAGTTGGAAGCTATGAAGAAGCGGATT
GCGGAAAGAGCGCGGCAAGCGGGTATTGATGAAGACTTGGATGTTGAAAA
GGCCTTCCTCGTGCCGGCCCCTCCCGCAATTGAATGGTGGGACGAAGGCC
TAGTAGACGGCGAGGACTATTCGGGCATTGAAAATGAACAGAACCTCAAA
ATTGACACGCCTGACTCGATCATCACGCAATACGTACAACATCCAGTTCT
TCTCGATCCTCCGCAGGAAAAGCTACTACCAGCACAGAAGCCTATGTATC
TTACGCCAAAGGAACAGGCGAAGATCCGTCGCCAGCGCCGCATGGCAGAT
CTGAAGGAACAACAAGCCAAGATCCGACTGGGTCTCGAGCCAGCACCTCC
ACCGAAGGTCAAGAAATCGAACCTGATGCGAGTCCTGGGTGAACAAGCCG
TCAAGGATCCCACGGCCGTGGAGGCACGCGTGAACCGGGAAATCGCAGAA
CGTCGAGAAAAGCACGAGACTGCGAATGCGGAGCGCAAACTCACCAAAGA
AGAACGCCGAGAGAAGCTTGCTCGGCAACAGGAGGCCGATGCCGAGAAAG
GTATCCAAATGACCGTTTATCGAATCGACAGCCTCGCCAACGGGCGGAAC
CGCTTCAAAATCAGCAAGAATGCTGAACAGAACGCTCTCACAGGGGTATG
CGTCATGCACCCTCGCTTCAACCTCGTGATTGTCGAGGGAGGCTCCCACT
CTATCAACAACTACAGAAAGCTCATGATGAACCGGATTGACTGGACTGAG
AACGCAGGCCCGAACGCGGTGCGCGAGGGCAACCGCGAGGCCCAAGCCGC
CTGGCTAGCAGCTGAAGATGAGCAAACAGGGGAACTGAAAGATCTTAGTT
CCAATACCTGCGAACTCGTCTGGGAAGGTCAGGTCAAAGCCCGCGCGTTC
CGGAAATGGCTGGGGGCGCGAGTGTGTGAAACGGATTCCCAAGCTAAGGA
TGTCTTGGCCCGCGCGAAGCTGGAGAATTTCTGGGTTTTGGCGAAGAGTG
CCAAACAGAACGAGTCGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298057M747DRAFT_298057Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298057-T1.cdsM747DRAFT_298057-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298057-T1.utr3p1M747DRAFT_298057-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298057-T1.exon1M747DRAFT_298057-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298057-T1.utr5p1M747DRAFT_298057-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298057-T1M747DRAFT_298057-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092621ZV
DBxrefInterPro:IPR013881
DBxrefInterPro:IPR010541
DBxrefPFAM:PF08572
DBxrefPFAM:PF06544
ProductU4/U6 small nuclear ribonucleo protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851931.1supercontigKZ851931.1:139473..141450 -