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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851932.1:173908..175151- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_298157-T1 ID=M747DRAFT_298157-T1|Name=M747DRAFT_298157-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1244bp|location=Sequence derived from alignment at KZ851932.1:173908..175151- (Aspergillus niger ATCC 13496)
CAGCCTCTCCCAGTCTCACCCTCGCCATCATGAAGCTCGTTTATCTCGGG
GTAAGGAATGACGGATGTTATCTGTTCATCGTGTCGGCTGTCTGACCCCG
TTCATCTGGACAGATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCT
GCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCGTC
AGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAACA
AGGACAAAGACAGGACATTCAAGAGCAAGGCAAGTTGGCGTCCCTCGGGG
TCGTCTTTTCACCCCCTCTGCGGCAGCCCCTGACCGCCGGTCGCCTACAG
ATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCGGAGTGATT
ATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAA
AATGCTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTG
ACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGTACCAGGAC
CCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGAC
CAAGATCGTTTTGCATAAGACTATCGAGAGCGTATGTTCTGCGCGCATTA
CATGTGGGCAGAATGGTGCTAACTCCCCAACCAGGTCCTCGAGCGCGGAG
AGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCAGTCG
AAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCAT
GTGAGCAGCGCGCCGATACCTATGCCGGTAACACCCACGTCGAGAATCCT
CGACACGACCCTCGGAATAGAGGAATTGGTGCGGACATGAAGATCAATCT
TTTCTGTGAAATATTTGGAAGCGTTCTGTTGCTACAGGCATTCGTTTATG
GTTTTTTTGACCAGGCTGGATTTGCAGGCACATGCGGGACAGGTTTGATT
TACGGTAGACGAAGAAATAAGCCCGAGAGCAATGAAGTGGCTTTATGACT
TGAGATGATATGGCAGGGCATTAAGAATGAGATATAAGGGGGAAGAACGT
AGACCCGAGACTATGTGAATACACCGTTTGGCGTACTGTGGCCTCGTCCC
AGCAGTGGATCCGTAGAGGGGCGCATCTGCGATGCTTATCTATGCTCGGG
ATCCGGCACGTTGATTGGCCCAACCAGGCAGTGCAATGCCTAAG back to topCoding sequence (CDS) from alignment at KZ851932.1:173908..175151- >M747DRAFT_298157-T1 ID=M747DRAFT_298157-T1|Name=M747DRAFT_298157-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2352bp|location=Sequence derived from alignment at KZ851932.1:173908..175151- (Aspergillus niger ATCC 13496)
GTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGG
GCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATT
CGTGCTGTGTGATCATGTGAATTTCACATTTCACGTCTACGCGCGAACCC
AAGGCATCGCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCT
GCTCACCAGATCCTCTCGAAAATGCTGGATGAGTTCCTCTCCCTGAACCC
GAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCT
ACATTCAGGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATT
CAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAG
CATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCG
ATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATG
ACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAACAAGGACAAAGACA
GGACATTCAAGAGCAAGATGAAGCTCGTTTATCTCGGGGTCCTCGAGCGC
GGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCA
GTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGA
TCATGTGAATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCG
GAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATC
CTCTCGAAAATGCTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTC
CTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGT
ACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTG
GACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAGCATTCTCCAAAA
TGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCT
ATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGT
AAGACCGTGGCCGAACGGACGAAACAAGGACAAAGACAGGACATTCAAGA
GCAAGATGAAGCTCGTTTATCTCGGGGTCCTCGAGCGCGGAGAGAAGATT
GACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTT
CTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCATGTGAATTT
CACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTA
GCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAAATG
CTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCC
GGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGTACCAGGACCCAC
ACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAG
ATCGTTTTGCATAAGACTATCGAGAGCATTCTCCAAAATGCTCAAGCTCC
CGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCA
CCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCC
GAACGGACGAAACAAGGACAAAGACAGGACATTCAAGAGCAAGATGAAGC
TCGTTTATCTCGGGGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTG
TCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGC
GAAGAAGCAGAATTCGTGCTGTGTGATCATGTGAATTTCACATTTCACGT
CTACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTAGCGATAATGAGT
ACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAAATGCTGGATGAGTTC
CTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCC
CTCCCTCAAGACCTACATTCAGGCGTACCAGGACCCACACCAGGTGGATA
GCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCAT
AAGACTATCGAGAGCATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCT
CTGCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCG
TCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAA
CAAGGACAAAGACAGGACATTCAAGAGCAAGATGAAGCTCGTTTATCTCG
GG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264CP4 |
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR010908 |
| DBxref | InterPro:IPR001388 |
| DBxref | PFAM:PF00957 |
| DBxref | PFAM:PF13774 |
| Product | vesicle transport protein ykt6 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851932.1 | supercontig | KZ851932.1:173908..175151 - |
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