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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851934.1:274560..275668- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_298387-T1 ID=M747DRAFT_298387-T1|Name=M747DRAFT_298387-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1109bp|location=Sequence derived from alignment at KZ851934.1:274560..275668- (Aspergillus niger ATCC 13496) CTCCTTCCCTCTTCATCGGCCAATTGCTTCCTTGCTTCTTGTTGTCATTA
TTGTTTAATTCAGCTTCACTTTCTTTGATTCTTATCTTCTTGAATCTCCT
TATTCTCCAAAATGGTGAGCACCCTTGTCCTGCCGATCCTCTTGGTGGCT
ACCGTTGTCTCCCAAGCGAACTCAACCAGACCATCGACGAATTGTGACAA
CTTCAGTCAATTAGACTAAGGGCAACCTCATCTAACGTCTGTATTCTCTT
CAGGCCTCTCCCCGTGCTGCTTCCCCCATGACCTCCGGTGCTGAGTCCGG
TCCCGACTCCAAGTCTGCTGGCGCTGGCACCGGCGCCTCTGCTGTCTCCT
CCGTCAACCGCCCTTCCTCTCCTACTCCTCCTGGTGGTCCCCGGGCTGCT
ATGCGTCGCCGCGCGGCCGCTGACCACAAGGAGTCCCTCCGCAATGCCAG
ACCCAGCTCGACTCGCGCCGCCGGTGCTGGTGGCTCCTCCGGCACGATGC
TCAAGCTCTACACTGACGAGAGCCCCGGTCTGAGGGTTGACCCCGTTGTT
GTCCTGGTTCTCAGTCTGGGCTTCATTTTCTCCGTCGTTGGTCTCCACGG
TAAGTGTGCTTTCCGGGTTGTCTTCTGGGTGGTGAAGTGGCCTCTAACGC
GCATATCCAGTCATTGCCAAGATCACCCGCAAGTTCTCCTCATAAGCCGC
TGAAATGCGACTTGTACTCTCGCCCCGTTGCTGTCTCCTGGTCCTATTAT
ACGTGATATGTCTGGCTCGTGTCGAATGATTCGGGGTCGCGCGCGAGATC
AGCAGCGCAGGGATCAAGCGAGGCCAGCGAATCCATCATCCAACCTTTTG
CCCTTCGATACATATACCCCTGGTGTCCCTTGCCTCTTTCTTGTGTGTGC
TGGTAGTGGGGAAGGCACATGCCGATCTTGTGCTTCTACAATTGGTCCAA
ATCTATCTGCAGAATAGGATGGAACAATTATCGCTAAATTATGCCGTGCA
CTTGTGCCCATCAACAATTAATGGAGAGCCCTAGTTCCGTGAAGAAATGC
GTTTTGTGTAATATAGTGCTTGTCAATGAAAACGAGACTCGATGAAAACC
CACCCCGAT back to topCoding sequence (CDS) from alignment at KZ851934.1:274560..275668- >M747DRAFT_298387-T1 ID=M747DRAFT_298387-T1|Name=M747DRAFT_298387-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1152bp|location=Sequence derived from alignment at KZ851934.1:274560..275668- (Aspergillus niger ATCC 13496) TCATTGCCAAGATCACCCGCAAGTTCTCCTCATAAGCCTCTCCCCGTGCT GCTTCCCCCATGACCTCCGGTGCTGAGTCCGGTCCCGACTCCAAGTCTGC TGGCGCTGGCACCGGCGCCTCTGCTGTCTCCTCCGTCAACCGCCCTTCCT CTCCTACTCCTCCTGGTGGTCCCCGGGCTGCTATGCGTCGCCGCGCGGCC GCTGACCACAAGGAGTCCCTCCGCAATGCCAGACCCAGCTCGACTCGCGC CGCCGGTGCTGGTGGCTCCTCCGGCACGATGCTCAAGCTCTACACTGACG AGAGCCCCGGTCTGAGGGTTGACCCCGTTGTTGTCCTGGTTCTCAGTCTG GGCTTCATTTTCTCCGTCGTTGGTCTCCACGATGTCATTGCCAAGATCAC CCGCAAGTTCTCCTCATAAGCCTCTCCCCGTGCTGCTTCCCCCATGACCT CCGGTGCTGAGTCCGGTCCCGACTCCAAGTCTGCTGGCGCTGGCACCGGC GCCTCTGCTGTCTCCTCCGTCAACCGCCCTTCCTCTCCTACTCCTCCTGG TGGTCCCCGGGCTGCTATGCGTCGCCGCGCGGCCGCTGACCACAAGGAGT CCCTCCGCAATGCCAGACCCAGCTCGACTCGCGCCGCCGGTGCTGGTGGC TCCTCCGGCACGATGCTCAAGCTCTACACTGACGAGAGCCCCGGTCTGAG GGTTGACCCCGTTGTTGTCCTGGTTCTCAGTCTGGGCTTCATTTTCTCCG TCGTTGGTCTCCACGATGTCATTGCCAAGATCACCCGCAAGTTCTCCTCA TAAGCCTCTCCCCGTGCTGCTTCCCCCATGACCTCCGGTGCTGAGTCCGG TCCCGACTCCAAGTCTGCTGGCGCTGGCACCGGCGCCTCTGCTGTCTCCT CCGTCAACCGCCCTTCCTCTCCTACTCCTCCTGGTGGTCCCCGGGCTGCT ATGCGTCGCCGCGCGGCCGCTGACCACAAGGAGTCCCTCCGCAATGCCAG ACCCAGCTCGACTCGCGCCGCCGGTGCTGGTGGCTCCTCCGGCACGATGC TCAAGCTCTACACTGACGAGAGCCCCGGTCTGAGGGTTGACCCCGTTGTT GTCCTGGTTCTCAGTCTGGGCTTCATTTTCTCCGTCGTTGGTCTCCACGA TG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005784 | Sec61 translocon complex |
Vocabulary: Biological Process
Term | Definition |
GO:0006886 | intracellular protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR016482 |
DBxref | InterPro:IPR030671 |
DBxref | PFAM:PF03911 |
Product | transport protein sec61 subunit beta |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851934.1 | supercontig | KZ851934.1:274560..275668 - |
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