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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851936.1:193200..194132+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_298544-T1 ID=M747DRAFT_298544-T1|Name=M747DRAFT_298544-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=933bp|location=Sequence derived from alignment at KZ851936.1:193200..194132+ (Aspergillus niger ATCC 13496)
GCAAGAAGGATGGAAGCTTGCTTCACCACCTTCCCGATCTTTCTCGACTT
TCCCTCCCAGCACCACCCGCCTAACAACCACCACCACGCGTCTCTTTCTC
GATCAACCGAACGGGATCACCGTCTTGTTACTCCTGTCGCTGCCTTCGCA
TCTTGATACCCTACACATCCCTCCCATTCATCCCTCACAATGACCGGTCG
TGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCATTTCA
TCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTTACGAG
CAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGTAAATGGATTTCTGGC
GACTTGGTTGCGTGACATTTGACTAATCGACTCGTGTAGGGTTTTGACGA
GTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTACAA
AGTCCGAAGAAGAGAAGCGGAGACCTCTAGGTATGCGGCAGTTCAAGCTC
TTGTTCATTCCCCTGGGCGCTGCAATGCTGATTATATTCTTGAACAACCT
AGGCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGC
AGTGAATTCAAAGGGGCGTTTAAGGATTTCGGAAGCCAGGAAAGGGAAAA
TTAATCATTCATCTCCGACTTCGTGCTGTGATACGATATCGTTTGCATTT
TCTAAACACTTTTTTACGGGTTCTCGCTGGAGTACAATTATCTGCACATT
ATTGTCGCATTAGATGAAAATAAGGACATGAAAGGGCTCGCTTTCTTTCT
GGATATCCTCTCAGCGTTGGCGCACGAGGCACCGGTCATCGCCGACCATG
AGGACGTCTACTAGCCAGTCGTGATCCGCAACCGGGATCTTTTCGGTCGG
GTCAAGCATTTGTTCTTTGAGAGCGAGCGCGAC back to topCoding sequence (CDS) from alignment at KZ851936.1:193200..194132+ >M747DRAFT_298544-T1 ID=M747DRAFT_298544-T1|Name=M747DRAFT_298544-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=864bp|location=Sequence derived from alignment at KZ851936.1:193200..194132+ (Aspergillus niger ATCC 13496)
ATGACCGGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCC
GATTCATTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCT
GGCTTTACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGGTTTT
GACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCGCATGGC
TACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGGCCAAATACTGCTCA
AGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAGTGAATGACCGGTCGT
GGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCATTTCAT
CTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTTACGAGC
AGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGGTTTTGACGAGTTCATG
AACCTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTACAAAGTCCGA
AGAAGAGAAGCGGAGACCTCTAGGCCAAATACTGCTCAAGGGCGATAACG
TGTCTCTTATTCAAGCCGTGCAGTGAATGACCGGTCGTGGAGGCGGTGGA
GCCGCTCGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAAGCTCCT
TCAGCAACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTGCTTTCC
GCATAGAGGGAAAAATCAGGGGTTTTGACGAGTTCATGAACCTTGTCATT
GACGATGCAGTGGAGGTTCGCATGGCTACAAAGTCCGAAGAAGAGAAGCG
GAGACCTCTAGGCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTATTC
AAGCCGTGCAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005681 | spliceosomal complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000398 | mRNA splicing, via spliceosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265NHW |
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR027078 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| Product | small nuclear ribonucleo protein SmE |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851936.1 | supercontig | KZ851936.1:193200..194132 + |
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