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M747DRAFT_298545-T1, M747DRAFT_298545-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298545-T1
Unique NameM747DRAFT_298545-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851936.1:193895..195003-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298545-T1 ID=M747DRAFT_298545-T1|Name=M747DRAFT_298545-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1109bp|location=Sequence derived from alignment at KZ851936.1:193895..195003- (Aspergillus niger ATCC 13496)
AATCATCCGCCAAAACATGTTCGCCTGCCAAGCCACGCCGCTTCGGCTAC
CAGACTAGTAGGTGAAGCACCTGGAGCAGACCGCGTAGACAACATTGGTC
GCTGGTCTGCGTACACCGCGTTCTCGTCGTGCAAGCAAGGACAAAGATGA
TGGCTGGGTTGCAAGTCGCAAAGAGGGACCTCCGCCGGAGGATGCGGGAT
GCTCTCCAGCAGATCCCCGCCGACTCTATTGCCAATCAATGTCAGGGATC
TCGATTCGCTTCTGCCCAATATGGTCGCGGCATGTACTGACCTCCTACAG
CCAGAATCGCTACAAATCAGTTACTCTCTCTCCAGGAATATCGGGATGCG
AAGAGGATCGGTGTCTATCTGTCCATGCCAGCCGGCGAACTCTCTACAAC
TGCTATAGTGCAGGATGCCCTGGCCAATGGCAAAGAAGTCTTCGTACCTT
ACATACACAATCTCGAGTTGTCGTCGCAGCCAAAGACATCAGTCATGGAT
ATGTTGCTGTTAGAGTCGATGGATGAGTTCAGATCGCTCGAGCCGGACAA
GTGGGGAATTCCATCACTTTCGCAAGCAAGTGTACTTAACAAGAGGAACT
GCTTCGGGGGCAAGGGAGTCTCACCCCAGCCGGAAGATTCTACGCAAGGA
CCCTACGGGTTGGATTTGATTGTCATGCCAGGAATGGCGTTTGATGACGG
ATTCAGAAGATTAGGCCATGGCAAAGGTTACTATGATCATTTCCTGACAA
GGTACTCCAAAGGTCCCGAGAGCACAACAACGGCACCGAAGCTGCCTCTA
CTGGGTAAGGCATAGTTGTTCCAGATGACAGCAGTCAACCCGAGGATATT
CCATCGCTAACCCCTCGTACAGTCGCGCTCGCTCTCAAAGAACAAATGCT
TGACCCGACCGAAAAGATCCCGGTTGCGGATCACGACTGGCTAGTAGACG
TCCTCATGGTCGGCGATGACCGGTGCCTCGTGCGCCAACGCTGAGAGGAT
ATCCAGAAAGAAAGCGAGCCCTTTCATGTCCTTATTTTCATCTAATGCGA
CAATAATGTGCAGATAATTGTACTCCAGCGAGAACCCGTAAAAAAGTGTT
TAGAAAATG
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Coding sequence (CDS) from alignment at KZ851936.1:193895..195003-

>M747DRAFT_298545-T1 ID=M747DRAFT_298545-T1|Name=M747DRAFT_298545-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2160bp|location=Sequence derived from alignment at KZ851936.1:193895..195003- (Aspergillus niger ATCC 13496)
TCGCGCTCGCTCTCAAAGAACAAATGCTTGACCCGACCGAAAAGATCCCG
GTTGCGGATCACGACTGGCTAGTAGACGTCCTCATGGTCGGCGATGACCG
GTGCCTCGTGCGCCAACGCTGACCAGAATCGCTACAAATCAGTTACTCTC
TCTCCAGGAATATCGGGATGCGAAGAGGATCGGTGTCTATCTGTCCATGC
CAGCCGGCGAACTCTCTACAACTGCTATAGTGCAGGATGCCCTGGCCAAT
GGCAAAGAAGTCTTCGTACCTTACATACACAATCTCGAGTTGTCGTCGCA
GCCAAAGACATCAGTCATGGATATGTTGCTGTTAGAGTCGATGGATGAGT
TCAGATCGCTCGAGCCGGACAAGTGGGGAATTCCATCACTTTCGCAAGCA
AGTGTACTTAACAAGAGGAACTGCTTCGGGGGCAAGGGAGTCTCACCCCA
GCCGGAAGATTCTACGCAAGGACCCTACGGGTTGGATTTGATTGTCATGC
CAGGAATGGCGTTTGATGACGGATTCAGAAGATTAGGCCATGGCAAAGGT
TACTATGATCATTTCCTGACAAGGTACTCCAAAGGTCCCGAGAGCACAAC
AACGGCACCGAAGCTGCCTCTACTGGATGATGGCTGGGTTGCAAGTCGCA
AAGAGGGACCTCCGCCGGAGGATGCGGGATGCTCTCCAGCAGATCCCCGC
CGACTCTATTGCCAATCAATTCGCGCTCGCTCTCAAAGAACAAATGCTTG
ACCCGACCGAAAAGATCCCGGTTGCGGATCACGACTGGCTAGTAGACGTC
CTCATGGTCGGCGATGACCGGTGCCTCGTGCGCCAACGCTGACCAGAATC
GCTACAAATCAGTTACTCTCTCTCCAGGAATATCGGGATGCGAAGAGGAT
CGGTGTCTATCTGTCCATGCCAGCCGGCGAACTCTCTACAACTGCTATAG
TGCAGGATGCCCTGGCCAATGGCAAAGAAGTCTTCGTACCTTACATACAC
AATCTCGAGTTGTCGTCGCAGCCAAAGACATCAGTCATGGATATGTTGCT
GTTAGAGTCGATGGATGAGTTCAGATCGCTCGAGCCGGACAAGTGGGGAA
TTCCATCACTTTCGCAAGCAAGTGTACTTAACAAGAGGAACTGCTTCGGG
GGCAAGGGAGTCTCACCCCAGCCGGAAGATTCTACGCAAGGACCCTACGG
GTTGGATTTGATTGTCATGCCAGGAATGGCGTTTGATGACGGATTCAGAA
GATTAGGCCATGGCAAAGGTTACTATGATCATTTCCTGACAAGGTACTCC
AAAGGTCCCGAGAGCACAACAACGGCACCGAAGCTGCCTCTACTGGATGA
TGGCTGGGTTGCAAGTCGCAAAGAGGGACCTCCGCCGGAGGATGCGGGAT
GCTCTCCAGCAGATCCCCGCCGACTCTATTGCCAATCAATTCGCGCTCGC
TCTCAAAGAACAAATGCTTGACCCGACCGAAAAGATCCCGGTTGCGGATC
ACGACTGGCTAGTAGACGTCCTCATGGTCGGCGATGACCGGTGCCTCGTG
CGCCAACGCTGACCAGAATCGCTACAAATCAGTTACTCTCTCTCCAGGAA
TATCGGGATGCGAAGAGGATCGGTGTCTATCTGTCCATGCCAGCCGGCGA
ACTCTCTACAACTGCTATAGTGCAGGATGCCCTGGCCAATGGCAAAGAAG
TCTTCGTACCTTACATACACAATCTCGAGTTGTCGTCGCAGCCAAAGACA
TCAGTCATGGATATGTTGCTGTTAGAGTCGATGGATGAGTTCAGATCGCT
CGAGCCGGACAAGTGGGGAATTCCATCACTTTCGCAAGCAAGTGTACTTA
ACAAGAGGAACTGCTTCGGGGGCAAGGGAGTCTCACCCCAGCCGGAAGAT
TCTACGCAAGGACCCTACGGGTTGGATTTGATTGTCATGCCAGGAATGGC
GTTTGATGACGGATTCAGAAGATTAGGCCATGGCAAAGGTTACTATGATC
ATTTCCTGACAAGGTACTCCAAAGGTCCCGAGAGCACAACAACGGCACCG
AAGCTGCCTCTACTGGATGATGGCTGGGTTGCAAGTCGCAAAGAGGGACC
TCCGCCGGAGGATGCGGGATGCTCTCCAGCAGATCCCCGCCGACTCTATT
GCCAATCAAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298545M747DRAFT_298545Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298545-T1M747DRAFT_298545-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298545-T1.cdsM747DRAFT_298545-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298545-T1.utr3p1M747DRAFT_298545-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298545-T1.exon3M747DRAFT_298545-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298545-T1.exon2M747DRAFT_298545-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298545-T1.exon1M747DRAFT_298545-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298545-T1.utr5p1M747DRAFT_298545-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264PMA
DBxrefInterPro:IPR037171
DBxrefInterPro:IPR024185
DBxrefInterPro:IPR002698
DBxrefPFAM:PF01812
Product5-formyltetrahydrofolate cyclo-ligase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851936.1supercontigKZ851936.1:193895..195003 -
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