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M747DRAFT_298600-T1, M747DRAFT_298600-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298600-T1
Unique NameM747DRAFT_298600-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851937.1:134256..135374+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298600-T1 ID=M747DRAFT_298600-T1|Name=M747DRAFT_298600-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1119bp|location=Sequence derived from alignment at KZ851937.1:134256..135374+ (Aspergillus niger ATCC 13496)
CCACCCCGTCAACACCACCAATCAATCAAAATGGGTCGCCTTCACTCTAA
GGGAAAGGGCATTTCGTCCTCCGCTCTCCCCTACTCTCGCACTCCCCCGA
GCTGGTTCAAGGCTTCCACCGAGCAGGTTGTTGAGCAGATCTGCAAGCTC
GCCAAGAAGGGTGCTACCCCCTCCCAGATCGGTGTTGTCCTCCGTGACAG
CCACGGTGTTGCCCAGGTCAAGACTGTCACTGGTAAGATTCCCCTCTCAA
TTCTCAAATTGCGGGGATGGGAAGGATACTAATATGTGGATGAATAGGTA
ACAAGATCCTCCGTATCTTGAAGTCCAACGGTACGACATCACCGACATGT
TCCCTTTCACCAGTCGCACCAGTTATATGAGCATGTTGTGGATGTGAATA
TGGCAGCGGAAATGGAACGGGCGCGAGCAGAGAAGCAGCTAGGACCCGGA
TTGGAATATATCCGGCGATTCGATTTCAGCCAGGTTACGGGTTGATTGAT
GGACAACGATACGATATATTCTGCACGGAAGTGAAGAAGAAGAAAGAGAA
CGAGGTTGAAACATACCCGGAATCGTTCTCGACTCTGTATCGACATGGAC
ACTCGCAAACCTACAGCCAATCGCAATCGCAGCAATCCCGGCGCTCTCTG
CCTCCCACCATCTCTACACCGCACACCCACAACATGTCCATAAAACTGGA
GGGCACCAGAAGCAAAACATCAACACCAACTCGCAGAAATGCAGTTGGAT
GTTGGAAGTTTCTTTTGCGTGATCCCGTATGCCTCTGCTTGGTCAAACCA
CAGGCTGACAGAGTGATCTTTTAAACAGGCCTTGCCCCCGAGCTCCCCGA
GGACCTGTACCACCTCATCAAGAAGGTATGCCGTTCCCCATTTATCTGAA
AACACGATGGTAGATTGAATACTAACAAACTGGTATTAGGCCGTCGCCGT
CCGCAAGCACCTTGAGCGTAACCGCAAGGACAAGGACAGCAAGTTCCGCC
TGATTCTCATCGAGTCTCGTATCCACCGTCTGTCTCGTTACTACAAGTCC
GTCGGTGTCCTCCCCCCCACCTGGCGTTACGAGTCCGCCACTGCTTCCAC
CCTCGTTGCTTAAGCGCGT
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Coding sequence (CDS) from alignment at KZ851937.1:134256..135374+

>M747DRAFT_298600-T1 ID=M747DRAFT_298600-T1|Name=M747DRAFT_298600-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1824bp|location=Sequence derived from alignment at KZ851937.1:134256..135374+ (Aspergillus niger ATCC 13496)
ATGGGTCGCCTTCACTCTAAGGGAAAGGGCATTTCGTCCTCCGCTCTCCC
CTACTCTCGCACTCCCCCGAGCTGGTTCAAGGCTTCCACCGAGCAGGTTG
TTGAGCAGATCTGCAAGCTCGCCAAGAAGGGTGCTACCCCCTCCCAGATC
GGTGTTGTCCTCCGTGACAGCCACGGTGTTGCCCAGGTCAAGACTGTCAC
TGGTAACAAGATCCTCCGTATCTTGAAGTCCAACGGCCTTGCCCCCGAGC
TCCCCGAGGACCTGTACCACCTCATCAAGAAGGCCGTCGCCGTCCGCAAG
CACCTTGAGCGTAACCGCAAGGACAAGGACAGCAAGTTCCGCCTGATTCT
CATCGAGTCTCGTATCCACCGTCTGTCTCGTTACTACAAGTCCGTCGGTG
TCCTCCCCCCCACCTGGCGTTACGAGTCCGCCACTGCTTCCACCCTCGTT
GCTTAAATGGGTCGCCTTCACTCTAAGGGAAAGGGCATTTCGTCCTCCGC
TCTCCCCTACTCTCGCACTCCCCCGAGCTGGTTCAAGGCTTCCACCGAGC
AGGTTGTTGAGCAGATCTGCAAGCTCGCCAAGAAGGGTGCTACCCCCTCC
CAGATCGGTGTTGTCCTCCGTGACAGCCACGGTGTTGCCCAGGTCAAGAC
TGTCACTGGTAACAAGATCCTCCGTATCTTGAAGTCCAACGGCCTTGCCC
CCGAGCTCCCCGAGGACCTGTACCACCTCATCAAGAAGGCCGTCGCCGTC
CGCAAGCACCTTGAGCGTAACCGCAAGGACAAGGACAGCAAGTTCCGCCT
GATTCTCATCGAGTCTCGTATCCACCGTCTGTCTCGTTACTACAAGTCCG
TCGGTGTCCTCCCCCCCACCTGGCGTTACGAGTCCGCCACTGCTTCCACC
CTCGTTGCTTAAATGGGTCGCCTTCACTCTAAGGGAAAGGGCATTTCGTC
CTCCGCTCTCCCCTACTCTCGCACTCCCCCGAGCTGGTTCAAGGCTTCCA
CCGAGCAGGTTGTTGAGCAGATCTGCAAGCTCGCCAAGAAGGGTGCTACC
CCCTCCCAGATCGGTGTTGTCCTCCGTGACAGCCACGGTGTTGCCCAGGT
CAAGACTGTCACTGGTAACAAGATCCTCCGTATCTTGAAGTCCAACGGCC
TTGCCCCCGAGCTCCCCGAGGACCTGTACCACCTCATCAAGAAGGCCGTC
GCCGTCCGCAAGCACCTTGAGCGTAACCGCAAGGACAAGGACAGCAAGTT
CCGCCTGATTCTCATCGAGTCTCGTATCCACCGTCTGTCTCGTTACTACA
AGTCCGTCGGTGTCCTCCCCCCCACCTGGCGTTACGAGTCCGCCACTGCT
TCCACCCTCGTTGCTTAAATGGGTCGCCTTCACTCTAAGGGAAAGGGCAT
TTCGTCCTCCGCTCTCCCCTACTCTCGCACTCCCCCGAGCTGGTTCAAGG
CTTCCACCGAGCAGGTTGTTGAGCAGATCTGCAAGCTCGCCAAGAAGGGT
GCTACCCCCTCCCAGATCGGTGTTGTCCTCCGTGACAGCCACGGTGTTGC
CCAGGTCAAGACTGTCACTGGTAACAAGATCCTCCGTATCTTGAAGTCCA
ACGGCCTTGCCCCCGAGCTCCCCGAGGACCTGTACCACCTCATCAAGAAG
GCCGTCGCCGTCCGCAAGCACCTTGAGCGTAACCGCAAGGACAAGGACAG
CAAGTTCCGCCTGATTCTCATCGAGTCTCGTATCCACCGTCTGTCTCGTT
ACTACAAGTCCGTCGGTGTCCTCCCCCCCACCTGGCGTTACGAGTCCGCC
ACTGCTTCCACCCTCGTTGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS13M747DRAFT_298600Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298600-T1M747DRAFT_298600-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298600-T1.utr5p1M747DRAFT_298600-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298600-T1.exon1M747DRAFT_298600-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_298600-T1.exon2M747DRAFT_298600-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298600-T1.exon3M747DRAFT_298600-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298600-T1.exon4M747DRAFT_298600-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298600-T1.cdsM747DRAFT_298600-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298600-T1.utr3p1M747DRAFT_298600-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG0926514P
DBxrefInterPro:IPR009068
DBxrefInterPro:IPR023029
DBxrefInterPro:IPR000589
DBxrefInterPro:IPR012606
DBxrefPFAM:PF00312
DBxrefPFAM:PF08069
Productribosomal 40S subunit protein S13
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851937.1supercontigKZ851937.1:134256..135374 +
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