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M747DRAFT_298617-T1, M747DRAFT_298617-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298617-T1
Unique NameM747DRAFT_298617-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851937.1:193599..194482+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298617-T1 ID=M747DRAFT_298617-T1|Name=M747DRAFT_298617-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=884bp|location=Sequence derived from alignment at KZ851937.1:193599..194482+ (Aspergillus niger ATCC 13496)
CTCAGCAATCGTTGCGGCGGCGTACGTACTCACTTCATCCTCTTCAGCTA
ATCGCGCGACACTGACTTCAATGTTGCAGTTGCCGTCCAGCAGCCCTACG
CTCTGCGTTGGTCTTTGATGAACTCGGTTTCTCCGGCTGCCGTTGCTCTT
GGAAGAACCGTTCAGACTAGGTAAGCTACTACGCGTGATTGGGATTCTTA
TTTGCGACTATTTCGACTTGGGAGGGGTTCGCGATATCGAACTCGACGTC
ATGAAGCGAATGTCGCTAAGTGGAGGCGGAACACGGATTGCTAACGTTGT
CATGCAGACATGCTGCCACCTCCTCCAACTCCTCCGACCCTACCAAGCTC
CTCGCCCAGCAGCGTCTCAACCGCCCCGTCTCTCCCCACCTTAGCATCTA
CCGTCCCCAGATCACATGGATCGGCAGTAGTATCCACCGTATCACCGGTA
TTGCGCTGTCCGGAAGTCTCTACCTCTATGCCAGTGCCTACCTCGCCTCT
CCCATGCTCGGCTGGGATCTGGGCTCTGCCTCCGCCGCTGCCGCTTTCGC
CGCTCTCCCTGTTGTCGCCAAGGTTGCCCTGAAGACTACCATGGCCCTGC
CTTTCACCTACCACTGCATGAACGGCGTGCGCCACCTGATTTGGGATACT
GGTGCTGGTCTTACCAACCCCCAGGTCATCAAGTCCGGCTGGACTGTGGT
GGGTTTGAGTACTCTTAGCGCTCTTATTCTTGCTTTCCTGTGAACTATTG
TGACATACCTCTGATTCCTGTTGTGTTTTAAAATTGTTTTCGTGCAATAT
ATTTTATACCAGTCAATTGACGACTGTTTTTGGATCAAACTTCACATCTT
CTCACCCCGAACTCTGAGCTCCGTCTCATTGCCC
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Coding sequence (CDS) from alignment at KZ851937.1:193599..194482+

>M747DRAFT_298617-T1 ID=M747DRAFT_298617-T1|Name=M747DRAFT_298617-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=978bp|location=Sequence derived from alignment at KZ851937.1:193599..194482+ (Aspergillus niger ATCC 13496)
ATGAACTCGGTTTCTCCGGCTGCCGTTGCTCTTGGAAGAACCGTTCAGAC
TAGACATGCTGCCACCTCCTCCAACTCCTCCGACCCTACCAAGCTCCTCG
CCCAGCAGCGTCTCAACCGCCCCGTCTCTCCCCACCTTAGCATCTACCGT
CCCCAGATCACATGGATCGGCAGTAGTATCCACCGTATCACCGGTATTGC
GCTGTCCGGAAGTCTCTACCTCTATGCCAGTGCCTACCTCGCCTCTCCCA
TGCTCGGCTGGGATCTGGGCTCTGCCTCCGCCGCTGCCGCTTTCGCCGCT
CTCCCTGTTGTCGCCAAGGTTGCCCTGAAGACTACCATGGCCCTGCCTTT
CACCTACCACTGCATGAACGGCGTGCGCCACCTGATTTGGGATACTGGTG
CTGGTCTTACCAACCCCCAGGTCATCAAGTCCGGCTGGACTGTGGTGGGT
TTGAGTACTCTTAGCGCTCTTATTCTTGCTTTCCTGTGAATGAACTCGGT
TTCTCCGGCTGCCGTTGCTCTTGGAAGAACCGTTCAGACTAGACATGCTG
CCACCTCCTCCAACTCCTCCGACCCTACCAAGCTCCTCGCCCAGCAGCGT
CTCAACCGCCCCGTCTCTCCCCACCTTAGCATCTACCGTCCCCAGATCAC
ATGGATCGGCAGTAGTATCCACCGTATCACCGGTATTGCGCTGTCCGGAA
GTCTCTACCTCTATGCCAGTGCCTACCTCGCCTCTCCCATGCTCGGCTGG
GATCTGGGCTCTGCCTCCGCCGCTGCCGCTTTCGCCGCTCTCCCTGTTGT
CGCCAAGGTTGCCCTGAAGACTACCATGGCCCTGCCTTTCACCTACCACT
GCATGAACGGCGTGCGCCACCTGATTTGGGATACTGGTGCTGGTCTTACC
AACCCCCAGGTCATCAAGTCCGGCTGGACTGTGGTGGGTTTGAGTACTCT
TAGCGCTCTTATTCTTGCTTTCCTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0045281succinate dehydrogenase complex
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron transfer activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
GO:0000104succinate dehydrogenase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298617M747DRAFT_298617Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298617-T1M747DRAFT_298617-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298617-T1.utr5p1M747DRAFT_298617-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_298617-T1.utr5p2M747DRAFT_298617-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298617-T1.exon1M747DRAFT_298617-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_298617-T1.exon2M747DRAFT_298617-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298617-T1.exon3M747DRAFT_298617-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298617-T1.cdsM747DRAFT_298617-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298617-T1.utr3p1M747DRAFT_298617-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018495
DBxrefInterPro:IPR000701
DBxrefInterPro:IPR034804
DBxrefInterPro:IPR014314
DBxrefPFAM:PF01127
Productcytochrome b560 subunit of succinate dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851937.1supercontigKZ851937.1:193599..194482 +
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