You are here

Home

M747DRAFT_298650-T1, M747DRAFT_298650-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298650-T1
Unique NameM747DRAFT_298650-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851937.1:284728..286415-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298650-T1 ID=M747DRAFT_298650-T1|Name=M747DRAFT_298650-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1688bp|location=Sequence derived from alignment at KZ851937.1:284728..286415- (Aspergillus niger ATCC 13496)
CACGCCCGAATTCCCCAGTCTGGGCCATTTCACCCGCCTTGGAGACTCTG
GGACCGCTTAGCGTCACCATAACCCACCAGACGAGAAAGCTGGATGGAGT
CAGCGTGGCCAGTCGGGGCAACTAGACTTATCCTCGATAGCCAACCCAAA
CTCTGAATAATGCGACTCCAGAGAAGGAGCCAACCATTTGCATAGAGGGG
GGGCAATGGCCCAGTCGACCCCTCACCGGCGCGGGGGTCTCCTAGTGGGC
TTGCTGTCCTAATAGTGTTTTCGTTGATGACTGTAGCGGTGTATATCTAA
GCTCCAATCCGCGGTATAAAGCTGCCTGCCGCCTGGCTAGGCCGTCTCTC
ATCTTCACCTCGTTCTCCTGCCTTCTCCTCAAGAATTCTCTTTTTTTACT
CCCCTCTCCGACCAATAGACCCAGTAATGGCTGCCAACCCTGTGGAAAAT
GGACTATTTGTCCATAACAACACTACCGCTCCAGCCCACCCCGGCTTGCT
GAGCATGTTCTCACTGAAGGGCAAGACTGCCATCGTTACCGGCGCCGGTG
CTGGCATCGGCCTTTCCGTAGCTATTGGCCTGGCTGAAGCTGGTGCAAAT
GTGGCCTTGTGGTATAGCAGCAACCCCAACTGCATCGAGCGGGCCGCGGA
AATTGCCTCCAAGTATGGTGTCCAGGGTCAGTAGCCCTCAAACCATTTTC
CCCACTTACCGTCAGACATACTTTACTAACGCTCAATCTAGCCCAGGCGT
ACAAGGTCGAAATCACCAAGCCCGAAGCCGTGCAGGCGGCCGTTGACCAG
GTTGTGAAAGACTTCAATGGCCGACTAGACGTTTTCATCGCCAATGCCGG
TATCCCCTGGACTAAAGGTCCCATGGTTGACGGTCCACTGGACCACTACT
CGAGTGTTGTCGACGTCGACCTGAACGGAACTTTCTACTGCGCCAGGGCA
GCGGCAACCCACTGGAGGAGACAAAAGGAGGAGGGCACCGATATCAATGG
TAACGCGCTCAACAACTTCACCTATGGCAGCTTTGTGGCCACCGCTTCCA
TGAGCGGTCACATTGTCAACTTCCCTCAGATGCAGGCAGCATACAACGCC
TCCAAAGCGGGTGTCATCCATCTTTGTAAGTGGAATAACCTTGTAGGCAT
AGACTTGCACTGTACTAATCCCCTATGCAGGCAAGTCGCTGGCTGTCGAG
TGGGTTAAGTTTGCGCGTGCCAACACCGTTTCTCCCGGATACATTGCGAC
AGAGATCTCGAATTTCATCCCAGATGATGTCAAGGGCATCTGGAAGGACA
AGATTCCCATGGGTCGCGAGGGAGAACCCGAGGAGCTGAAGGGCGCGTAT
CTGTACCTGGCATCGGATGCATCCAGCTACACCACTGGAGCAGACATTGT
GGTTGACGGCGGCTACTGCGCCCCGTAGGCTTTTGATGATATAGATGGCA
TTTTATGATCTGTACATTTCAACTTACAGCGATACATATGAACGGTAGAT
TACATGATAGACGAAAATGAACGACTGAACTTCTTCGCGATCAAGTCCGC
TCGTGGCGCTTATTAGATCCAACCAAGCCAGAGCCAAGGCACCAGGCTGA
CCACTGCCACAAAGCCATGCAGAAGCCGTGGCTTGCAGGTTGCAGGGCTT
TAATATTCGGGATCGGCGGTGATGTAGGCCCGCGATCG
back to top

Coding sequence (CDS) from alignment at KZ851937.1:284728..286415-

>M747DRAFT_298650-T1 ID=M747DRAFT_298650-T1|Name=M747DRAFT_298650-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2646bp|location=Sequence derived from alignment at KZ851937.1:284728..286415- (Aspergillus niger ATCC 13496)
GCAAGTCGCTGGCTGTCGAGTGGGTTAAGTTTGCGCGTGCCAACACCGTT
TCTCCCGGATACATTGCGACAGAGATCTCGAATTTCATCCCAGATGATGT
CAAGGGCATCTGGAAGGACAAGATTCCCATGGGTCGCGAGGGAGAACCCG
AGGAGCTGAAGGGCGCGTATCTGTACCTGGCATCGGATGCATCCAGCTAC
ACCACTGGAGCAGACATTGTGGTTGACGGCGGCTACTGCGCCCCGTAGCC
CAGGCGTACAAGGTCGAAATCACCAAGCCCGAAGCCGTGCAGGCGGCCGT
TGACCAGGTTGTGAAAGACTTCAATGGCCGACTAGACGTTTTCATCGCCA
ATGCCGGTATCCCCTGGACTAAAGGTCCCATGGTTGACGGTCCACTGGAC
CACTACTCGAGTGTTGTCGACGTCGACCTGAACGGAACTTTCTACTGCGC
CAGGGCAGCGGCAACCCACTGGAGGAGACAAAAGGAGGAGGGCACCGATA
TCAATGGTAACGCGCTCAACAACTTCACCTATGGCAGCTTTGTGGCCACC
GCTTCCATGAGCGGTCACATTGTCAACTTCCCTCAGATGCAGGCAGCATA
CAACGCCTCCAAAGCGGGTGTCATCCATCTTTATGGCTGCCAACCCTGTG
GAAAATGGACTATTTGTCCATAACAACACTACCGCTCCAGCCCACCCCGG
CTTGCTGAGCATGTTCTCACTGAAGGGCAAGACTGCCATCGTTACCGGCG
CCGGTGCTGGCATCGGCCTTTCCGTAGCTATTGGCCTGGCTGAAGCTGGT
GCAAATGTGGCCTTGTGGTATAGCAGCAACCCCAACTGCATCGAGCGGGC
CGCGGAAATTGCCTCCAAGTATGGTGTCCAGGGCAAGTCGCTGGCTGTCG
AGTGGGTTAAGTTTGCGCGTGCCAACACCGTTTCTCCCGGATACATTGCG
ACAGAGATCTCGAATTTCATCCCAGATGATGTCAAGGGCATCTGGAAGGA
CAAGATTCCCATGGGTCGCGAGGGAGAACCCGAGGAGCTGAAGGGCGCGT
ATCTGTACCTGGCATCGGATGCATCCAGCTACACCACTGGAGCAGACATT
GTGGTTGACGGCGGCTACTGCGCCCCGTAGCCCAGGCGTACAAGGTCGAA
ATCACCAAGCCCGAAGCCGTGCAGGCGGCCGTTGACCAGGTTGTGAAAGA
CTTCAATGGCCGACTAGACGTTTTCATCGCCAATGCCGGTATCCCCTGGA
CTAAAGGTCCCATGGTTGACGGTCCACTGGACCACTACTCGAGTGTTGTC
GACGTCGACCTGAACGGAACTTTCTACTGCGCCAGGGCAGCGGCAACCCA
CTGGAGGAGACAAAAGGAGGAGGGCACCGATATCAATGGTAACGCGCTCA
ACAACTTCACCTATGGCAGCTTTGTGGCCACCGCTTCCATGAGCGGTCAC
ATTGTCAACTTCCCTCAGATGCAGGCAGCATACAACGCCTCCAAAGCGGG
TGTCATCCATCTTTATGGCTGCCAACCCTGTGGAAAATGGACTATTTGTC
CATAACAACACTACCGCTCCAGCCCACCCCGGCTTGCTGAGCATGTTCTC
ACTGAAGGGCAAGACTGCCATCGTTACCGGCGCCGGTGCTGGCATCGGCC
TTTCCGTAGCTATTGGCCTGGCTGAAGCTGGTGCAAATGTGGCCTTGTGG
TATAGCAGCAACCCCAACTGCATCGAGCGGGCCGCGGAAATTGCCTCCAA
GTATGGTGTCCAGGGCAAGTCGCTGGCTGTCGAGTGGGTTAAGTTTGCGC
GTGCCAACACCGTTTCTCCCGGATACATTGCGACAGAGATCTCGAATTTC
ATCCCAGATGATGTCAAGGGCATCTGGAAGGACAAGATTCCCATGGGTCG
CGAGGGAGAACCCGAGGAGCTGAAGGGCGCGTATCTGTACCTGGCATCGG
ATGCATCCAGCTACACCACTGGAGCAGACATTGTGGTTGACGGCGGCTAC
TGCGCCCCGTAGCCCAGGCGTACAAGGTCGAAATCACCAAGCCCGAAGCC
GTGCAGGCGGCCGTTGACCAGGTTGTGAAAGACTTCAATGGCCGACTAGA
CGTTTTCATCGCCAATGCCGGTATCCCCTGGACTAAAGGTCCCATGGTTG
ACGGTCCACTGGACCACTACTCGAGTGTTGTCGACGTCGACCTGAACGGA
ACTTTCTACTGCGCCAGGGCAGCGGCAACCCACTGGAGGAGACAAAAGGA
GGAGGGCACCGATATCAATGGTAACGCGCTCAACAACTTCACCTATGGCA
GCTTTGTGGCCACCGCTTCCATGAGCGGTCACATTGTCAACTTCCCTCAG
ATGCAGGCAGCATACAACGCCTCCAAAGCGGGTGTCATCCATCTTTATGG
CTGCCAACCCTGTGGAAAATGGACTATTTGTCCATAACAACACTACCGCT
CCAGCCCACCCCGGCTTGCTGAGCATGTTCTCACTGAAGGGCAAGACTGC
CATCGTTACCGGCGCCGGTGCTGGCATCGGCCTTTCCGTAGCTATTGGCC
TGGCTGAAGCTGGTGCAAATGTGGCCTTGTGGTATAGCAGCAACCCCAAC
TGCATCGAGCGGGCCGCGGAAATTGCCTCCAAGTATGGTGTCCAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LXR3M747DRAFT_298650Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298650-T1M747DRAFT_298650-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298650-T1.cdsM747DRAFT_298650-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298650-T1.utr3p1M747DRAFT_298650-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298650-T1.exon3M747DRAFT_298650-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298650-T1.exon2M747DRAFT_298650-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298650-T1.exon1M747DRAFT_298650-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298650-T1.utr5p1M747DRAFT_298650-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
ProductL-xylulose reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851937.1supercontigKZ851937.1:284728..286415 -
Powered by Drupal