You are here

Home

M747DRAFT_298715-T1, M747DRAFT_298715-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298715-T1
Unique NameM747DRAFT_298715-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851938.1:281339..282762-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298715-T1 ID=M747DRAFT_298715-T1|Name=M747DRAFT_298715-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1424bp|location=Sequence derived from alignment at KZ851938.1:281339..282762- (Aspergillus niger ATCC 13496)
ATCATCATCATCATTATCATCATCTATCCATCTATACATCTATACATCAA
AGACCATCACAAATACACCCAAAATGTCTCGACTACAGCACCTCGCACCC
GCTCTCTCCCGCCTCTACCCATGGACATCCAGCCCGCTGATCGTCAGCGC
TCCCATGCGTGTCATGTCAGGCCCGGCCCTAGCTGTGGCAGTATCCCGCG
CCGGCGGCCTTGGCTTCATAAACAACGCCAGCCCAGACATAGCCGCAGAT
CTAGAGCAAGCATCATCCCTTATATCTTCATCTACCCTCAACGCAACACC
AACACCAACACCAACCCCGCACCTCCCCATCGGCGTGGGCTTTCTCCTCT
GGGCCGACGACCTCGACTCCGCCGTCGCAACCATCCAGAAATACAAGCCC
TGCGCGGTATGGCTCTACGCCCCGCCTAACGGCCAAGCAGACCTCGACAC
CTGGTCCCGTGGAATCCGCACCGCCTCGCCAGGAACCCAGATCTGGATCC
AGATCGGGACTTTATCTGAAGCTAGGAGTCTCTTGAAATCGGCAGAGAAA
CCCGACGTGGTCGTCGTCCAAGGCGCCGAAGCTGGCGGCCACGGCCGGGC
TAAAGACGGGTTGGGTCTGATTTCGCTCCTCCCTGAAGTGGCTGATGCGT
TTGCGGGGAGTGAGATTCCCCTATTTGCTGCGGGCGGGATAGCTGATGGA
CGGGGGGCAGCGGCGGCGCTGTGTCTTGGGGCATCGGGGGTGGTGATGGG
GACGAGGTTTCTGGCTGCGAATGAGACGAGGATTGCGCGTGGGTATCAGC
AGGAGGTTGTACGGGCGGAAGATGGGGCTGTGACTACTATGAAGACGTTG
TTGTATAATCATCTCCGGGGCACGTTTGGGTGGCCGGAGGACTATACTCC
CAGGACGATTATTAATCGGTCGTGGGTTGATCATCTGGCTGGGAAGGGGT
TTGAGGAGTTGAAGGTGCTACATGATGAGGCTGCCAAGGAGGGGGATAAG
GCGTGGGGGCCGGAGGGACGGCTGGCGACGTATGCGGGGGCGTCGATTGG
GTTGATCCATGAGGTTAAGGATGCGGAGAGCATTGTGAAAGAGGTGAGGG
AGCAGGTGTTGGAGCGGTTTGGGTCGATTGGGGGTCAGTAGTGTTTGGTT
TGGGCTGGAGAGGATGTGAATTGGTAGAATGATGTGAGATTTCTAGCAGG
GGGGTTGTGTTGTTGTCAGAGTATGGTATAAGTACTCAGCTAACTGATAA
GATGAACACCATCTGGGACATTTACCATTGTGAAGAATGTGTATCTTAAT
ATGATGTTTGGAATTTGTTAGGAGCATGGTGAACAAGGGAAGAGGTGTGT
GATTACACTATTGATGATATTTAGGACTATAGAAGGCCATCCGCCACCAT
CCGTCACACTCACTCAACCTGCTC
back to top

Coding sequence (CDS) from alignment at KZ851938.1:281339..282762-

>M747DRAFT_298715-T1 ID=M747DRAFT_298715-T1|Name=M747DRAFT_298715-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1068bp|location=Sequence derived from alignment at KZ851938.1:281339..282762- (Aspergillus niger ATCC 13496)
ATGTCTCGACTACAGCACCTCGCACCCGCTCTCTCCCGCCTCTACCCATG
GACATCCAGCCCGCTGATCGTCAGCGCTCCCATGCGTGTCATGTCAGGCC
CGGCCCTAGCTGTGGCAGTATCCCGCGCCGGCGGCCTTGGCTTCATAAAC
AACGCCAGCCCAGACATAGCCGCAGATCTAGAGCAAGCATCATCCCTTAT
ATCTTCATCTACCCTCAACGCAACACCAACACCAACACCAACCCCGCACC
TCCCCATCGGCGTGGGCTTTCTCCTCTGGGCCGACGACCTCGACTCCGCC
GTCGCAACCATCCAGAAATACAAGCCCTGCGCGGTATGGCTCTACGCCCC
GCCTAACGGCCAAGCAGACCTCGACACCTGGTCCCGTGGAATCCGCACCG
CCTCGCCAGGAACCCAGATCTGGATCCAGATCGGGACTTTATCTGAAGCT
AGGAGTCTCTTGAAATCGGCAGAGAAACCCGACGTGGTCGTCGTCCAAGG
CGCCGAAGCTGGCGGCCACGGCCGGGCTAAAGACGGGTTGGGTCTGATTT
CGCTCCTCCCTGAAGTGGCTGATGCGTTTGCGGGGAGTGAGATTCCCCTA
TTTGCTGCGGGCGGGATAGCTGATGGACGGGGGGCAGCGGCGGCGCTGTG
TCTTGGGGCATCGGGGGTGGTGATGGGGACGAGGTTTCTGGCTGCGAATG
AGACGAGGATTGCGCGTGGGTATCAGCAGGAGGTTGTACGGGCGGAAGAT
GGGGCTGTGACTACTATGAAGACGTTGTTGTATAATCATCTCCGGGGCAC
GTTTGGGTGGCCGGAGGACTATACTCCCAGGACGATTATTAATCGGTCGT
GGGTTGATCATCTGGCTGGGAAGGGGTTTGAGGAGTTGAAGGTGCTACAT
GATGAGGCTGCCAAGGAGGGGGATAAGGCGTGGGGGCCGGAGGGACGGCT
GGCGACGTATGCGGGGGCGTCGATTGGGTTGATCCATGAGGTTAAGGATG
CGGAGAGCATTGTGAAAGAGGTGAGGGAGCAGGTGTTGGAGCGGTTTGGG
TCGATTGGGGGTCAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0018580nitronate monooxygenase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298715M747DRAFT_298715Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298715-T1.cdsM747DRAFT_298715-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298715-T1.utr3p1M747DRAFT_298715-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298715-T1.exon1M747DRAFT_298715-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298715-T1.utr5p1M747DRAFT_298715-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298715-T1M747DRAFT_298715-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519381.2
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR004136
Productoxidoreductase 2-nitropropane dioxygenase family
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851938.1supercontigKZ851938.1:281339..282762 -
Powered by Drupal