You are here

Home

M747DRAFT_298771-T1, M747DRAFT_298771-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298771-T1
Unique NameM747DRAFT_298771-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851939.1:285604..287023+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298771-T1 ID=M747DRAFT_298771-T1|Name=M747DRAFT_298771-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1420bp|location=Sequence derived from alignment at KZ851939.1:285604..287023+ (Aspergillus niger ATCC 13496)
TCTAAACATTGAGCCCATAATGACCCCTCCCATCCTCATCATCGGCGCCG
GCCTCTCCGGCCTCACCGTCTCCCGCATCCTTACCAACGCCTCCATCCCC
AACATCGTCTTTGAAGCCTCCACCCCTGACCGCAGCCAAGGCTACGCCAT
CAGCCTCCGCGATTGGGGCTACACCTCCCTCCTGACAGCCCTGGGTGACC
TGCCCCTCCGCAGCCTCACCCGGGGCGTGGCTCCAGACCGCATCCTCGGC
GGGACCGGCTGGATCGACCAAGCCCTCCGGGACAACCACACCGGCAACCT
CCTAGTGGCTCCAGACCCCGAAGCCAAGCAATGCATTGTGCGGGCGAACC
GCAATGCCCTCCGCACCTGGATCGCTGATAGCGGCGACGAGGAAGTGGAC
ATCCGCTACGGCCACCGTCTGCGCAGCGTGCAGGGCTCAATGGGCAACGT
GACGGCCACTTTCGAGAACGGTGCCAAGTACCAGGGCTCATTGGTCATCG
CAGCAGATGGCGTGCATTCTAGCGTGCGGTCTCAGATCCTGCCCCACGTG
AGCCCGGATATTGTGCCCGTGGTGGTGTATCATGGGGAATTGGAACTCCC
TCGCAAGGAATTCGATAATCTTATCCGTCCGCACTCCGGACCGTCGAATA
TCCTAGCTGGTGTGGGCGATGGGTTCAATACCCCTATTACTGTTTGTAAT
ATCACTCCTACACATGTGCATCTCGATTGGTCGTATTCGAGACCGAGTAC
GGAAAACAAGGAGAATAAGGATCCTCTCTATCGGCCGCATGTCTCTGCTG
CTGAGGCTAAGCAGATTCCCCCGGCCTTGTTGGAGGAAATTGCCTCCCGG
GATCTGGCGAGGCCGTGGTCCCAGCTGCTTAATGCCGAGGCGTTGCCGAC
TCATCGTGTCTTTAACTGGGTGAGTCGCTGTGTGTCGGTAACGAGGGAGG
ATGTGAATGCTGCGCAGAAGCAGGGCGTGGTGTTTATTGGGGACTCGTGG
CATGCGATGCCAATTTTTGGGGGCGAAGGGGGTAATCATGCCCTGGTTGA
TGCGGTGGAGTTGGCGGAGGCATTGACGGGTAAGGAAGGGAATTTGGATG
CTGCTGTAACGGGGTATTATGATCGCGCGTGGAGACGCTGTCAGGAGGCC
GTGAGACGGTCTAGGCAGAGGTTCTTCCAGTTGCATCGGCCTATGAGGGA
GTGGATGGAGATTGCGGAGAAGAAAAAGATGATGGCTGCTATGAAGGGGG
TGGAGGCTCATTGATTGTGTAGCTGTACTGGGGTAGGAGTTATGTGATTA
CTTCGATTGATTTTATTTGGTTAGTGATTCGATATGGAGAACCTTTTCTG
CAGTGAATAGTCAATTTGCTGCGTTTTGATCTCGATTTCAGATCTAGGTG
CATGCCACATATTTATTCTC
back to top

Coding sequence (CDS) from alignment at KZ851939.1:285604..287023+

>M747DRAFT_298771-T1 ID=M747DRAFT_298771-T1|Name=M747DRAFT_298771-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1245bp|location=Sequence derived from alignment at KZ851939.1:285604..287023+ (Aspergillus niger ATCC 13496)
ATGACCCCTCCCATCCTCATCATCGGCGCCGGCCTCTCCGGCCTCACCGT
CTCCCGCATCCTTACCAACGCCTCCATCCCCAACATCGTCTTTGAAGCCT
CCACCCCTGACCGCAGCCAAGGCTACGCCATCAGCCTCCGCGATTGGGGC
TACACCTCCCTCCTGACAGCCCTGGGTGACCTGCCCCTCCGCAGCCTCAC
CCGGGGCGTGGCTCCAGACCGCATCCTCGGCGGGACCGGCTGGATCGACC
AAGCCCTCCGGGACAACCACACCGGCAACCTCCTAGTGGCTCCAGACCCC
GAAGCCAAGCAATGCATTGTGCGGGCGAACCGCAATGCCCTCCGCACCTG
GATCGCTGATAGCGGCGACGAGGAAGTGGACATCCGCTACGGCCACCGTC
TGCGCAGCGTGCAGGGCTCAATGGGCAACGTGACGGCCACTTTCGAGAAC
GGTGCCAAGTACCAGGGCTCATTGGTCATCGCAGCAGATGGCGTGCATTC
TAGCGTGCGGTCTCAGATCCTGCCCCACGTGAGCCCGGATATTGTGCCCG
TGGTGGTGTATCATGGGGAATTGGAACTCCCTCGCAAGGAATTCGATAAT
CTTATCCGTCCGCACTCCGGACCGTCGAATATCCTAGCTGGTGTGGGCGA
TGGGTTCAATACCCCTATTACTGTTTGTAATATCACTCCTACACATGTGC
ATCTCGATTGGTCGTATTCGAGACCGAGTACGGAAAACAAGGAGAATAAG
GATCCTCTCTATCGGCCGCATGTCTCTGCTGCTGAGGCTAAGCAGATTCC
CCCGGCCTTGTTGGAGGAAATTGCCTCCCGGGATCTGGCGAGGCCGTGGT
CCCAGCTGCTTAATGCCGAGGCGTTGCCGACTCATCGTGTCTTTAACTGG
GTGAGTCGCTGTGTGTCGGTAACGAGGGAGGATGTGAATGCTGCGCAGAA
GCAGGGCGTGGTGTTTATTGGGGACTCGTGGCATGCGATGCCAATTTTTG
GGGGCGAAGGGGGTAATCATGCCCTGGTTGATGCGGTGGAGTTGGCGGAG
GCATTGACGGGTAAGGAAGGGAATTTGGATGCTGCTGTAACGGGGTATTA
TGATCGCGCGTGGAGACGCTGTCAGGAGGCCGTGAGACGGTCTAGGCAGA
GGTTCTTCCAGTTGCATCGGCCTATGAGGGAGTGGATGGAGATTGCGGAG
AAGAAAAAGATGATGGCTGCTATGAAGGGGGTGGAGGCTCATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298771M747DRAFT_298771Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298771-T1.utr5p1M747DRAFT_298771-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298771-T1.exon1M747DRAFT_298771-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298771-T1.cdsM747DRAFT_298771-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298771-T1.utr3p1M747DRAFT_298771-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298771-T1M747DRAFT_298771-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519391.1
NoteSMCOG1087:hypothetical protein
DBxrefInterPro:IPR002938
DBxrefInterPro:IPR036188
DBxrefPFAM:PF01494
ProductFAD/NAD(P)-binding domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851939.1supercontigKZ851939.1:285604..287023 +
Powered by Drupal