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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851940.1:23565..24657+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_298776-T1 ID=M747DRAFT_298776-T1|Name=M747DRAFT_298776-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1093bp|location=Sequence derived from alignment at KZ851940.1:23565..24657+ (Aspergillus niger ATCC 13496) AAGATGCCTCAAGCCCAGCCCGAGTTGAAGAAGGTATGATATTCGCGATT
AATACCCCGCCAAACTTTCCCCGATACAGAGCACCGAAGCTAACATTGCG
GTTTTCCAACAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAA
CCGCAAAGTCATTGGTATCCTGCGAGGCTATGATGTACGTCGCGCTTGTG
CCCCCTGGATTTCTACTTTCCTGCCTGCTGTGTTGCTGTTATACGGGTTG
ATATGCCTTGGATGGGGTCGAAGATTGAGATGTTCTTGGGTTCAATCCAT
CGAGTGAAAGAGGGGGCGGGGAGAGTGTGTGTATGTGTGTATAGGTTACT
GACGTCTGCGCTTGTCTATACAGGTGTTCATGAACATTGTCCTTGACGAG
GCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGATTGT
ATGTGGCTAGTCCCATTCCCGGACGTCTACGTTTGGTCTGCAAACTGGGA
GGGGCAGGAAGCTAATGGCTATCTATTCGTCTTAATAGGTCATTCGCGGT
AACTCGGTTGTTATGCTCGAGGTCAGTATCACCTGCCATAGGACTACGAT
TGATGGCGTGCCTTATCAAGAGACTAACCTTTTGTACTTAAAATAGGCCC
TGGAACGTATCAGCGACAAATAAAGTGCTGTGGGTGGACGGGAAAGTCAA
CATGTCTTTTTATACCTTCACTGTGGGAATGATTTAATTGCAATGGAGTT
CACGGGTTGGTTGCTCACGGAATGATCGATGGCATCTCGCTTTCAAAAGG
AAACAGAAAAGAAATCTTCATTTCAAACAAATTACGAGAAACACTTCAAG
TGCAGAGGTCTGGAGTATACCAGATTACGGCAGTCTTTTTTTAAAGAGGA
AGAGGGGTGCATTGACCCAAAGCAATGATCCATGACGGCTAGTCAGTTAT
GGTCTATCTTTTTTTCTCGGCAAACCAATGCCCAACATATCCCATTGGCA
ATAATCAAATGGGCCTCTGGAACCAGATAATACCCTGTGGAGATAACCCA
GAATACTAGAAGAATAATAGAAGGAAAAGAGAACCCCCGCGCC back to topCoding sequence (CDS) from alignment at KZ851940.1:23565..24657+ >M747DRAFT_298776-T1 ID=M747DRAFT_298776-T1|Name=M747DRAFT_298776-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1185bp|location=Sequence derived from alignment at KZ851940.1:23565..24657+ (Aspergillus niger ATCC 13496) ATGCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATT CTGCCAACTGAACGGCAACCGCAAAGTCATTGGTATCCTGCGAGGCTATG ATGTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGT GGTGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGT TATGCTCGAGGCCCTGGAACGTATCAGCGACAAATAAATGCCTCAAGCCC AGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATTCTGCCAACTGAAC GGCAACCGCAAAGTCATTGGTATCCTGCGAGGCTATGATGTGTTCATGAA CATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTG CTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGCC CTGGAACGTATCAGCGACAAATAAATGCCTCAAGCCCAGCCCGAGTTGAA GAAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAACCGCAAAG TCATTGGTATCCTGCGAGGCTATGATGTGTTCATGAACATTGTCCTTGAC GAGGCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGAT TGTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGCCCTGGAACGTATCA GCGACAAATAAATGCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAA AAGCGGGTATTCTGCCAACTGAACGGCAACCGCAAAGTCATTGGTATCCT GCGAGGCTATGATGTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGG AGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGT AACTCGGTTGTTATGCTCGAGGCCCTGGAACGTATCAGCGACAAATAAAT GCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATTCT GCCAACTGAACGGCAACCGCAAAGTCATTGGTATCCTGCGAGGCTATGAT GTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGTGG TGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGTTA TGCTCGAGGCCCTGGAACGTATCAGCGACAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005681 | spliceosomal complex |
Vocabulary: Biological Process
Term | Definition |
GO:0000387 | spliceosomal snRNP assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR010920 |
DBxref | InterPro:IPR034098 |
DBxref | InterPro:IPR001163 |
DBxref | PFAM:PF01423 |
Product | Serine/threonine-protein kinase smg1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KZ851940.1 | supercontig | KZ851940.1:23565..24657 + |
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