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M747DRAFT_298776-T1, M747DRAFT_298776-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298776-T1
Unique NameM747DRAFT_298776-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851940.1:23565..24657+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298776-T1 ID=M747DRAFT_298776-T1|Name=M747DRAFT_298776-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1093bp|location=Sequence derived from alignment at KZ851940.1:23565..24657+ (Aspergillus niger ATCC 13496)
AAGATGCCTCAAGCCCAGCCCGAGTTGAAGAAGGTATGATATTCGCGATT AATACCCCGCCAAACTTTCCCCGATACAGAGCACCGAAGCTAACATTGCG GTTTTCCAACAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAA CCGCAAAGTCATTGGTATCCTGCGAGGCTATGATGTACGTCGCGCTTGTG CCCCCTGGATTTCTACTTTCCTGCCTGCTGTGTTGCTGTTATACGGGTTG ATATGCCTTGGATGGGGTCGAAGATTGAGATGTTCTTGGGTTCAATCCAT CGAGTGAAAGAGGGGGCGGGGAGAGTGTGTGTATGTGTGTATAGGTTACT GACGTCTGCGCTTGTCTATACAGGTGTTCATGAACATTGTCCTTGACGAG GCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGATTGT ATGTGGCTAGTCCCATTCCCGGACGTCTACGTTTGGTCTGCAAACTGGGA GGGGCAGGAAGCTAATGGCTATCTATTCGTCTTAATAGGTCATTCGCGGT AACTCGGTTGTTATGCTCGAGGTCAGTATCACCTGCCATAGGACTACGAT TGATGGCGTGCCTTATCAAGAGACTAACCTTTTGTACTTAAAATAGGCCC TGGAACGTATCAGCGACAAATAAAGTGCTGTGGGTGGACGGGAAAGTCAA CATGTCTTTTTATACCTTCACTGTGGGAATGATTTAATTGCAATGGAGTT CACGGGTTGGTTGCTCACGGAATGATCGATGGCATCTCGCTTTCAAAAGG AAACAGAAAAGAAATCTTCATTTCAAACAAATTACGAGAAACACTTCAAG TGCAGAGGTCTGGAGTATACCAGATTACGGCAGTCTTTTTTTAAAGAGGA AGAGGGGTGCATTGACCCAAAGCAATGATCCATGACGGCTAGTCAGTTAT GGTCTATCTTTTTTTCTCGGCAAACCAATGCCCAACATATCCCATTGGCA ATAATCAAATGGGCCTCTGGAACCAGATAATACCCTGTGGAGATAACCCA GAATACTAGAAGAATAATAGAAGGAAAAGAGAACCCCCGCGCC
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Coding sequence (CDS) from alignment at KZ851940.1:23565..24657+

>M747DRAFT_298776-T1 ID=M747DRAFT_298776-T1|Name=M747DRAFT_298776-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1185bp|location=Sequence derived from alignment at KZ851940.1:23565..24657+ (Aspergillus niger ATCC 13496)
ATGCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATT
CTGCCAACTGAACGGCAACCGCAAAGTCATTGGTATCCTGCGAGGCTATG
ATGTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGT
GGTGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGT
TATGCTCGAGGCCCTGGAACGTATCAGCGACAAATAAATGCCTCAAGCCC
AGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATTCTGCCAACTGAAC
GGCAACCGCAAAGTCATTGGTATCCTGCGAGGCTATGATGTGTTCATGAA
CATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTG
CTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGCC
CTGGAACGTATCAGCGACAAATAAATGCCTCAAGCCCAGCCCGAGTTGAA
GAAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAACCGCAAAG
TCATTGGTATCCTGCGAGGCTATGATGTGTTCATGAACATTGTCCTTGAC
GAGGCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGAT
TGTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGCCCTGGAACGTATCA
GCGACAAATAAATGCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAA
AAGCGGGTATTCTGCCAACTGAACGGCAACCGCAAAGTCATTGGTATCCT
GCGAGGCTATGATGTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGG
AGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGT
AACTCGGTTGTTATGCTCGAGGCCCTGGAACGTATCAGCGACAAATAAAT
GCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATTCT
GCCAACTGAACGGCAACCGCAAAGTCATTGGTATCCTGCGAGGCTATGAT
GTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGTGG
TGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGTTA
TGCTCGAGGCCCTGGAACGTATCAGCGACAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0000387spliceosomal snRNP assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SMG1M747DRAFT_298776Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298776-T1M747DRAFT_298776-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298776-T1.utr5p1M747DRAFT_298776-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298776-T1.exon1M747DRAFT_298776-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_298776-T1.exon2M747DRAFT_298776-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298776-T1.exon3M747DRAFT_298776-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298776-T1.exon4M747DRAFT_298776-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_298776-T1.exon5M747DRAFT_298776-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298776-T1.cdsM747DRAFT_298776-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298776-T1.utr3p1M747DRAFT_298776-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR034098
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
ProductSerine/threonine-protein kinase smg1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851940.1supercontigKZ851940.1:23565..24657 +