You are here

Home

M747DRAFT_298892-T1, M747DRAFT_298892-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298892-T1
Unique NameM747DRAFT_298892-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851941.1:253486..254715-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298892-T1 ID=M747DRAFT_298892-T1|Name=M747DRAFT_298892-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1230bp|location=Sequence derived from alignment at KZ851941.1:253486..254715- (Aspergillus niger ATCC 13496)
GTGACCGGGGACTAGGGAGAGACCCATCCAAGATGATGCCGAACACTCGC
AATTCCATTCGCATAAGGTGGTAGAGAGGTATAAAGTCACCGGGAGAAGT
CCATGGTCTCATAGTCAAAGCATTCCAAACCCTTCCGACCAAGTCCCTTG
AACTTCCTCCCCATTCCCCACATCACAATGACTTCCTACCCTCCCAGAAA
GTGCTGCTTCCAGGGCGTCAAGCACGAAGGCGACGCAACTGGGGACTTCA
TCACCATTGATGACTTTGAAGTCTACAAGAAGGCCCCCGAGGGTGCCGCT
CCCGAGAAGGCAATCATTCTGTCTGTCCCACCTCATTGCAGTGGTAGCAA
ATCGTTAGTCTGAACTGACCGCAAAATAGACTGACTGATATCCTGGGCCA
CCGCTTCAAGAATGCTCAGTTGATCGCCGACCAGTTCGCCGCCAATGGCT
ACTTGGTCCTGATCCCCGATCTCTTCTATGGTGATCCCATCCCCATTGGT
GGCTCCGCGGGCCTGGACCTCCACAAATGGCTGGTGGGCGAGTACCACGA
GAAGAAGATCGCACACACTCCCCCCGTCATTGACCCCATCCTGGAAAAGT
GCATTACTGAACTGCGCACCAAGTACAACATCAAGGTAGGTCCAGCTCTC
CGCTGCTAATAGCGGGCCGGACGAACGCTGGGACTAATGTTCTGACAGAA
AATCGGTGCCATCGGATACTGCTTTGGCGCCAAGTATGTCGTTCGTTTCT
TGAAGCCCGACCAAGGCAAGGTGGATGTCGGTTTCCTGGCGCACCCTAGT
CTGGTCGAGAAGGAGGAATTGGAGGCCATCAAGGGTCCCCTGGCCATTGC
GGCGGCCGAGAAGGACCATGTCTTCCCCGCCGAGAAGCGACACGAGTCGG
AGCAAATCTTGGAAACGCTGGCGTTGCCCTATGCACTGACTCTCTATGGC
GGTGTTGGACACGGGTGAGTGATTTTTTCCCCTGAACCCAATGAAATACG
CATCAGGCTGATCATGTCATAGATTCGCGCTGCGGGGAGACCTCAGCGAC
CCCAAGGTGCTGTTCGCCAAGGAGAACGCCTTCATCCAGGCGCTGCAGTG
GTTTGATGAGCACTTGACGGTGTGAGTGGGCAACTGCGAGTCGGAGGGGA
GGGGGAGATTCGGTAGCTTAAATAGCTGCGAGCAGTAGACTAGTAATGGC
TGATGACCACGCTATAAATATCATGATGGC
back to top

Coding sequence (CDS) from alignment at KZ851941.1:253486..254715-

>M747DRAFT_298892-T1 ID=M747DRAFT_298892-T1|Name=M747DRAFT_298892-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3072bp|location=Sequence derived from alignment at KZ851941.1:253486..254715- (Aspergillus niger ATCC 13496)
ATTCGCGCTGCGGGGAGACCTCAGCGACCCCAAGGTGCTGTTCGCCAAGG
AGAACGCCTTCATCCAGGCGCTGCAGTGGTTTGATGAGCACTTGACGGTG
TGAAAAATCGGTGCCATCGGATACTGCTTTGGCGCCAAGTATGTCGTTCG
TTTCTTGAAGCCCGACCAAGGCAAGGTGGATGTCGGTTTCCTGGCGCACC
CTAGTCTGGTCGAGAAGGAGGAATTGGAGGCCATCAAGGGTCCCCTGGCC
ATTGCGGCGGCCGAGAAGGACCATGTCTTCCCCGCCGAGAAGCGACACGA
GTCGGAGCAAATCTTGGAAACGCTGGCGTTGCCCTATGCACTGACTCTCT
ATGGCGGTGTTGGACACGGACTGACTGATATCCTGGGCCACCGCTTCAAG
AATGCTCAGTTGATCGCCGACCAGTTCGCCGCCAATGGCTACTTGGTCCT
GATCCCCGATCTCTTCTATGGTGATCCCATCCCCATTGGTGGCTCCGCGG
GCCTGGACCTCCACAAATGGCTGGTGGGCGAGTACCACGAGAAGAAGATC
GCACACACTCCCCCCGTCATTGACCCCATCCTGGAAAAGTGCATTACTGA
ACTGCGCACCAAGTACAACATCAAGATGACTTCCTACCCTCCCAGAAAGT
GCTGCTTCCAGGGCGTCAAGCACGAAGGCGACGCAACTGGGGACTTCATC
ACCATTGATGACTTTGAAGTCTACAAGAAGGCCCCCGAGGGTGCCGCTCC
CGAGAAGGCAATCATTCTATTCGCGCTGCGGGGAGACCTCAGCGACCCCA
AGGTGCTGTTCGCCAAGGAGAACGCCTTCATCCAGGCGCTGCAGTGGTTT
GATGAGCACTTGACGGTGTGAAAAATCGGTGCCATCGGATACTGCTTTGG
CGCCAAGTATGTCGTTCGTTTCTTGAAGCCCGACCAAGGCAAGGTGGATG
TCGGTTTCCTGGCGCACCCTAGTCTGGTCGAGAAGGAGGAATTGGAGGCC
ATCAAGGGTCCCCTGGCCATTGCGGCGGCCGAGAAGGACCATGTCTTCCC
CGCCGAGAAGCGACACGAGTCGGAGCAAATCTTGGAAACGCTGGCGTTGC
CCTATGCACTGACTCTCTATGGCGGTGTTGGACACGGACTGACTGATATC
CTGGGCCACCGCTTCAAGAATGCTCAGTTGATCGCCGACCAGTTCGCCGC
CAATGGCTACTTGGTCCTGATCCCCGATCTCTTCTATGGTGATCCCATCC
CCATTGGTGGCTCCGCGGGCCTGGACCTCCACAAATGGCTGGTGGGCGAG
TACCACGAGAAGAAGATCGCACACACTCCCCCCGTCATTGACCCCATCCT
GGAAAAGTGCATTACTGAACTGCGCACCAAGTACAACATCAAGATGACTT
CCTACCCTCCCAGAAAGTGCTGCTTCCAGGGCGTCAAGCACGAAGGCGAC
GCAACTGGGGACTTCATCACCATTGATGACTTTGAAGTCTACAAGAAGGC
CCCCGAGGGTGCCGCTCCCGAGAAGGCAATCATTCTATTCGCGCTGCGGG
GAGACCTCAGCGACCCCAAGGTGCTGTTCGCCAAGGAGAACGCCTTCATC
CAGGCGCTGCAGTGGTTTGATGAGCACTTGACGGTGTGAAAAATCGGTGC
CATCGGATACTGCTTTGGCGCCAAGTATGTCGTTCGTTTCTTGAAGCCCG
ACCAAGGCAAGGTGGATGTCGGTTTCCTGGCGCACCCTAGTCTGGTCGAG
AAGGAGGAATTGGAGGCCATCAAGGGTCCCCTGGCCATTGCGGCGGCCGA
GAAGGACCATGTCTTCCCCGCCGAGAAGCGACACGAGTCGGAGCAAATCT
TGGAAACGCTGGCGTTGCCCTATGCACTGACTCTCTATGGCGGTGTTGGA
CACGGACTGACTGATATCCTGGGCCACCGCTTCAAGAATGCTCAGTTGAT
CGCCGACCAGTTCGCCGCCAATGGCTACTTGGTCCTGATCCCCGATCTCT
TCTATGGTGATCCCATCCCCATTGGTGGCTCCGCGGGCCTGGACCTCCAC
AAATGGCTGGTGGGCGAGTACCACGAGAAGAAGATCGCACACACTCCCCC
CGTCATTGACCCCATCCTGGAAAAGTGCATTACTGAACTGCGCACCAAGT
ACAACATCAAGATGACTTCCTACCCTCCCAGAAAGTGCTGCTTCCAGGGC
GTCAAGCACGAAGGCGACGCAACTGGGGACTTCATCACCATTGATGACTT
TGAAGTCTACAAGAAGGCCCCCGAGGGTGCCGCTCCCGAGAAGGCAATCA
TTCTATTCGCGCTGCGGGGAGACCTCAGCGACCCCAAGGTGCTGTTCGCC
AAGGAGAACGCCTTCATCCAGGCGCTGCAGTGGTTTGATGAGCACTTGAC
GGTGTGAAAAATCGGTGCCATCGGATACTGCTTTGGCGCCAAGTATGTCG
TTCGTTTCTTGAAGCCCGACCAAGGCAAGGTGGATGTCGGTTTCCTGGCG
CACCCTAGTCTGGTCGAGAAGGAGGAATTGGAGGCCATCAAGGGTCCCCT
GGCCATTGCGGCGGCCGAGAAGGACCATGTCTTCCCCGCCGAGAAGCGAC
ACGAGTCGGAGCAAATCTTGGAAACGCTGGCGTTGCCCTATGCACTGACT
CTCTATGGCGGTGTTGGACACGGACTGACTGATATCCTGGGCCACCGCTT
CAAGAATGCTCAGTTGATCGCCGACCAGTTCGCCGCCAATGGCTACTTGG
TCCTGATCCCCGATCTCTTCTATGGTGATCCCATCCCCATTGGTGGCTCC
GCGGGCCTGGACCTCCACAAATGGCTGGTGGGCGAGTACCACGAGAAGAA
GATCGCACACACTCCCCCCGTCATTGACCCCATCCTGGAAAAGTGCATTA
CTGAACTGCGCACCAAGTACAACATCAAGATGACTTCCTACCCTCCCAGA
AAGTGCTGCTTCCAGGGCGTCAAGCACGAAGGCGACGCAACTGGGGACTT
CATCACCATTGATGACTTTGAAGTCTACAAGAAGGCCCCCGAGGGTGCCG
CTCCCGAGAAGGCAATCATTCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298892M747DRAFT_298892Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298892-T1M747DRAFT_298892-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298892-T1.cdsM747DRAFT_298892-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298892-T1.utr3p1M747DRAFT_298892-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298892-T1.exon4M747DRAFT_298892-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_298892-T1.exon3M747DRAFT_298892-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298892-T1.exon2M747DRAFT_298892-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298892-T1.exon1M747DRAFT_298892-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298892-T1.utr5p1M747DRAFT_298892-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR002925
DBxrefInterPro:IPR029058
DBxrefPFAM:PF01738
Productdienelactone hydrolase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851941.1supercontigKZ851941.1:253486..254715 -
Powered by Drupal