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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851943.1:159221..160838+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_299041-T1 ID=M747DRAFT_299041-T1|Name=M747DRAFT_299041-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1618bp|location=Sequence derived from alignment at KZ851943.1:159221..160838+ (Aspergillus niger ATCC 13496)
GGCCAAGTTCAATATTGGCGAGCATACCAAGGACCCTGTCTACCTGGACG
CTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCACGAT
GAGTCCAAGAAGTACTTCGATGCCATCAACGGTACACACGGATCCCCCGT
CTCGCAGCTACCCCTCCTTTTGCTGACTGGCGTATTTTTCCAGGCATGTT
GAACCACCAGATTGGATTCTCCAAAGCGATGACGGAACTCTACAAACCCA
TCTCCGGTCGTGCTTCCGACCCTAGCTCCTATACAATCGAGGGTAATCCG
GAGGGTATCCGGGCATGTGAGGAATACGAGGCGATTGTGCGGGACCTCCA
AGAATCGCTGGTGCCCGAGTTAGAGATGATCGACACCCGCGTCATCAGCC
CTGCACAGCAGCTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCGGTG
AAGCGAGACCACAAGAAACTGGACTACGACCGCCACAAGAACTCGCTCAA
GAAGCTTCAGGATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCGCTTT
ACAAGGCAGAAAATGATGTGGAACAAGCGACTCAGGACTACAACTACTAC
AACGACCTGCTCAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGCTGA
ATTCATCCGTCCTCTGTTCCAGTCCTTCTACTACATGCAACTGAACGTCT
TCTACACACTACACGAGCGAATGCAGGGCATCAATATCGGTTACTTCGAC
CTGAATCTGGACATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGTCAA
GGAGCGCGCCGAGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGCGGGC
GCAAACCCGGCTCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAGGGC
AAGAGTGGTTACGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAACCC
CCCGCCGCCTTACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCAGCGA
AGAGCAAGCCCGCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTCAGC
GCTCCCGTCGAAACCGTCACGGCACTATATGACTATGAGGCCCAGGCGCA
CGGCGACCTCAGCTTCTCCGCCGGGGATGTCATCGAGATCACACAGCGAA
CGGATAACCAGAATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAGGGA
CAATTTCCTGGTGAGCATGACCGGCTGTCATTATCAAAACATACCTCGCT
AACTTGTATTCCAGCAAACTACGTCCAGCTGAACTAGCATTATGCTATAG
CTATATAATATCCTTATTCCTTGCTCGTCAATGTCATCACTGGTTATCTG
GAGTTTCGGAGTGCCATTGTATCACTTGACAAGTAGGAATCGCCAGTCGT
TTTTGATTCTTGCCATAGAGCGTTGCATGATGATGACCGTTCGCTGTACA
TATTGATAATATCGAGGTTGTTTATTCCTACTGCATATTTGACCGCTACT
TTGGGTTCTATAGAACTTCGGAAGTATTTCAATGCGTTCCTATGCAACTT
TTACTAGAAGCCGTGACATTCGATTCCGATGGGTTTATCAGGTAGACAAA
CAGCAACCGTAGTAATAG back to topCoding sequence (CDS) from alignment at KZ851943.1:159221..160838+ >M747DRAFT_299041-T1 ID=M747DRAFT_299041-T1|Name=M747DRAFT_299041-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2010bp|location=Sequence derived from alignment at KZ851943.1:159221..160838+ (Aspergillus niger ATCC 13496)
ATGACGGAACTCTACAAACCCATCTCCGGTCGTGCTTCCGACCCTAGCTC
CTATACAATCGAGGGTAATCCGGAGGGTATCCGGGCATGTGAGGAATACG
AGGCGATTGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGTTAGAGATG
ATCGACACCCGCGTCATCAGCCCTGCACAGCAGCTATTGGAGGTAATCAA
GGTGATCCGCAAAGTCGCGGTGAAGCGAGACCACAAGAAACTGGACTACG
ACCGCCACAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGGACAAGTCA
CTGAAGGATGAGAAGGCGCTTTACAAGGCAGAAAATGATGTGGAACAAGC
GACTCAGGACTACAACTACTACAACGACCTGCTCAAGGACGAGTTGCCCA
AGCTGTTCGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCCAGTCCTTC
TACTACATGCAACTGAACGTCTTCTACACACTACACGAGCGAATGCAGGG
CATCAATATCGGTTACTTCGACCTGAATCTGGACATCGAGGAAGCGTTCG
AGAACAAGCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCAGCATCGTC
CACTTTAAAGCCACGGGCGGGCGCAAACCCGGCTCGAAGCTTGGCCCCAA
GGACAAACTGGCGCAAGAGGGCAAGAGTGGTTACGCCTCACGTCAGCGAG
ATCCCGATGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCACTGCAGGC
AGCAGCTTTACCGCCGCAGCGAAGAGCAAGCCCGCCCCTCCGCCGCCGAA
ACCGAAGCCCGCTCGTTTCAGCGCTCCCGTCGAAACCGTCACGGCACTAT
ATGACTATGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCGCCGGGGAT
GTCATCGAGATCACACAGCGAACGGATAACCAGAATGAGTGGTGGAGCGG
CCGTGTTGACGGACGAGAGGGACAATTTCCTGCAAACTACGTCCAGCTGA
ACTAGATGACGGAACTCTACAAACCCATCTCCGGTCGTGCTTCCGACCCT
AGCTCCTATACAATCGAGGGTAATCCGGAGGGTATCCGGGCATGTGAGGA
ATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGTTAG
AGATGATCGACACCCGCGTCATCAGCCCTGCACAGCAGCTATTGGAGGTA
ATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGACCACAAGAAACTGGA
CTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGGACA
AGTCACTGAAGGATGAGAAGGCGCTTTACAAGGCAGAAAATGATGTGGAA
CAAGCGACTCAGGACTACAACTACTACAACGACCTGCTCAAGGACGAGTT
GCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCCAGT
CCTTCTACTACATGCAACTGAACGTCTTCTACACACTACACGAGCGAATG
CAGGGCATCAATATCGGTTACTTCGACCTGAATCTGGACATCGAGGAAGC
GTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCAGCA
TCGTCCACTTTAAAGCCACGGGCGGGCGCAAACCCGGCTCGAAGCTTGGC
CCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGTTACGCCTCACGTCA
GCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCACTG
CAGGCAGCAGCTTTACCGCCGCAGCGAAGAGCAAGCCCGCCCCTCCGCCG
CCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTCGAAACCGTCACGGC
ACTATATGACTATGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCGCCG
GGGATGTCATCGAGATCACACAGCGAACGGATAACCAGAATGAGTGGTGG
AGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCTGCAAACTACGTCCA
GCTGAACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036028 |
| DBxref | InterPro:IPR027267 |
| DBxref | InterPro:IPR004148 |
| DBxref | InterPro:IPR001452 |
| DBxref | PFAM:PF14604 |
| DBxref | PFAM:PF07653 |
| DBxref | PFAM:PF00018 |
| DBxref | PFAM:PF03114 |
| Product | BAR-domain-containing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851943.1 | supercontig | KZ851943.1:159221..160838 + |
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