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M747DRAFT_300301-T1, M747DRAFT_300301-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_300301-T1
Unique NameM747DRAFT_300301-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851984.1:6380..8595-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_300301-T1 ID=M747DRAFT_300301-T1|Name=M747DRAFT_300301-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2216bp|location=Sequence derived from alignment at KZ851984.1:6380..8595- (Aspergillus niger ATCC 13496)
CCTCTCATTCATTCATCCATTCCATCACATCCAATCCATCCAATCTATCG
CTCGTGCTGTTGTCTCTTACCTCCTCGCTCCCCTTTCCCCTCTCTTCTTC
CCCAGACTACCCCCCCTAATCCTTCTGTCGCGCTATTTCCGCCTTCTCTC
GCTCTCGCTCTGACTGGCCTCCTCTGTGAGGTCCATCTCCATGCGAGATT
GCTGAGGTACCAAACCCCTCCCGCATATCCATGGCGTCCGTTTCGCCACC
CAAACCGTGGGAGAGGGCAGGCGCTGCTGCTGGTATGTCCACAGCTCTCT
TGGAAAATGATGAATTAGTAAAACAATATATATCTTCATATTACGGTGTG
ACTGACACATCACTCACTTAAAGGGTCTCCTGCTTTGGCAACATCATCGG
CGGCTACTCCGACCGCCTCATCCGCGATGACGGCCAGTTCGACTACTCCG
ACCGCGGCCGCCAGTGCCTCGGCCCCCACAGCTACAGCATCTTCAACATC
TACTGCTCCTGATCTCCCGTCCCGTCCTAATTCACTGAATTCTGTTGTCA
ATCGCACCGCCTCCAATTACTCTCCCTACTCGGCCTCCCGGTTCGGCGCA
AGCCCTTACGGCGGCTACGGAAGCTACTCGTCGCCGTACTCCCGCTTCGG
CACGATGGGCTCCATGTACGGAGGCTATGGCGGCATGGGAGGATATGGCG
GCATGTATGGTGGCATGGGAGGCATGGGGGGGATGTACGGCGGCATGCCC
GGTGATCCCAACGATCCCAACAGCCTGACGAATTCCTTCAGCCAGAGCAC
CCAAGCTACGTTCCAGATGATTGAGAGTATCGTGGGTGCGTTTGGAGGAT
TCGCTCAGATGCTGGAGAGCACATACATGGCGACGCACAGCTCCTTCTTT
GGTACGTTAACATCTTTTCCTCGGCGCGTTGTTGCCTGTTCACTAATAGT
TGTCCCTAGCCATGGTTTCTGTGGCAGAGCAGTTCGGCAACCTCCGAAAC
ACGCTTGGCTCCGCCCTCGGTATCTTCACCATCATCCGCTGGTTCAAGAC
TCTGATCGCGAAGATCACCGGTCGTCCCCCGCCGGCTGATGCTACCGCCC
TCACTCCGTCCGCCTTTGCAGCATTCCTCAGCGGCCGCTCCTCCCCCGCC
ACCCTGCCGGATGGCACTCCCGCTCCCCCCAAGCCCTCCAAGAAGCCGTT
CTTCATGTTCCTGATCGCCGTATTCGGTCTTCCCTACCTGATGGGCAAGC
TGATCAAGGCTCTGGCTCGGTCGCAAGAGGAACGTCGCCAGCTGATGCTG
GGTCCAAATGGCGAGCCCGTGCAGGGCCAAGGCGCACCGCTTGACCCTTC
CAAGCTTGACTTTTGCCGCGTGCTCTACGACTACACCCCTGAAGCCCAGG
AGAGCTCCGGCATCGATCTGGCCGTGAAGAAGGGCGACATCGTCGCTGTC
CTCAGCAAATCCGATCCGATGGGTAATGCCTCGGAGTGGTGGCGTTGCCG
TGCTCGTGATGGCCGCGTTGGATACTTGCCGGGACCGTACCTGGAGACTA
TCCAGCGCCGCCCACAACAGCAAGCGATCACCTCGGGCAGCGAAGCCGGC
AGTCGCAGCAACTCGATGCAGGCGAGCGCATCCGAGGAGATCGCCACGGA
AGCCAAGAAGCCCCAGCTGAAGGGCAAGATGGGTGATATTTCGCTTGAAA
GCTTCCAGAAGAGCGCGTTCTACTCATGATCATCATCCATCCGTCCATTC
ATCTCCCTCATCAGCGCACTCCTCATACACATATTTATAGTATCATAGTT
ACACTTTCGACGCGCACACTCACCCGCACACTCCAGCTTGACTGCATGCA
TGCATGCATGTCTGTATGTTACGAACCACGCAAAGCACGTGGCAGGACCT
AGGTTGACCGCCTGATGATGACTTTACTACCTTTACTTTTTTTTACTTCT
TCTGTCCCCTTTTCTCTTCCCCGTTATTGTTATTGTCGCCGGATTACCGG
ATTTGGATTGTCTAGCGTTGGGTACCTGGTATATGGGCATGTTTCCTTTT
TCGACTTTTCTTATTCTCTTCGAGGGGTTGAGTCATCATTTTCCGGTGCA
TGTTTGTTTCAGCGAAAAAAAAGAAAGATTTCTTTTTGACTTTTTCTTTC
TTTTTCTCTTCCAAACTCATTCCTCCCCTTTCTCCTACCTCTATGGTTAT
CTCATGCAGCGGGAAC
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Coding sequence (CDS) from alignment at KZ851984.1:6380..8595-

>M747DRAFT_300301-T1 ID=M747DRAFT_300301-T1|Name=M747DRAFT_300301-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4050bp|location=Sequence derived from alignment at KZ851984.1:6380..8595- (Aspergillus niger ATCC 13496)
CCATGGTTTCTGTGGCAGAGCAGTTCGGCAACCTCCGAAACACGCTTGGC
TCCGCCCTCGGTATCTTCACCATCATCCGCTGGTTCAAGACTCTGATCGC
GAAGATCACCGGTCGTCCCCCGCCGGCTGATGCTACCGCCCTCACTCCGT
CCGCCTTTGCAGCATTCCTCAGCGGCCGCTCCTCCCCCGCCACCCTGCCG
GATGGCACTCCCGCTCCCCCCAAGCCCTCCAAGAAGCCGTTCTTCATGTT
CCTGATCGCCGTATTCGGTCTTCCCTACCTGATGGGCAAGCTGATCAAGG
CTCTGGCTCGGTCGCAAGAGGAACGTCGCCAGCTGATGCTGGGTCCAAAT
GGCGAGCCCGTGCAGGGCCAAGGCGCACCGCTTGACCCTTCCAAGCTTGA
CTTTTGCCGCGTGCTCTACGACTACACCCCTGAAGCCCAGGAGAGCTCCG
GCATCGATCTGGCCGTGAAGAAGGGCGACATCGTCGCTGTCCTCAGCAAA
TCCGATCCGATGGGTAATGCCTCGGAGTGGTGGCGTTGCCGTGCTCGTGA
TGGCCGCGTTGGATACTTGCCGGGACCGTACCTGGAGACTATCCAGCGCC
GCCCACAACAGCAAGCGATCACCTCGGGCAGCGAAGCCGGCAGTCGCAGC
AACTCGATGCAGGCGAGCGCATCCGAGGAGATCGCCACGGAAGCCAAGAA
GCCCCAGCTGAAGGGCAAGATGGGTGATATTTCGCTTGAAAGCTTCCAGA
AGAGCGCGTTCTACTCATGAGGTCTCCTGCTTTGGCAACATCATCGGCGG
CTACTCCGACCGCCTCATCCGCGATGACGGCCAGTTCGACTACTCCGACC
GCGGCCGCCAGTGCCTCGGCCCCCACAGCTACAGCATCTTCAACATCTAC
TGCTCCTGATCTCCCGTCCCGTCCTAATTCACTGAATTCTGTTGTCAATC
GCACCGCCTCCAATTACTCTCCCTACTCGGCCTCCCGGTTCGGCGCAAGC
CCTTACGGCGGCTACGGAAGCTACTCGTCGCCGTACTCCCGCTTCGGCAC
GATGGGCTCCATGTACGGAGGCTATGGCGGCATGGGAGGATATGGCGGCA
TGTATGGTGGCATGGGAGGCATGGGGGGGATGTACGGCGGCATGCCCGGT
GATCCCAACGATCCCAACAGCCTGACGAATTCCTTCAGCCAGAGCACCCA
AGCTACGTTCCAGATGATTGAGAGTATCGTGGGTGCGTTTGGAGGATTCG
CTCAGATGCTGGAGAGCACATACATGGCGACGCACAGCTCCTTCTTTGAT
GGCGTCCGTTTCGCCACCCAAACCGTGGGAGAGGGCAGGCGCTGCTGCTG
CCATGGTTTCTGTGGCAGAGCAGTTCGGCAACCTCCGAAACACGCTTGGC
TCCGCCCTCGGTATCTTCACCATCATCCGCTGGTTCAAGACTCTGATCGC
GAAGATCACCGGTCGTCCCCCGCCGGCTGATGCTACCGCCCTCACTCCGT
CCGCCTTTGCAGCATTCCTCAGCGGCCGCTCCTCCCCCGCCACCCTGCCG
GATGGCACTCCCGCTCCCCCCAAGCCCTCCAAGAAGCCGTTCTTCATGTT
CCTGATCGCCGTATTCGGTCTTCCCTACCTGATGGGCAAGCTGATCAAGG
CTCTGGCTCGGTCGCAAGAGGAACGTCGCCAGCTGATGCTGGGTCCAAAT
GGCGAGCCCGTGCAGGGCCAAGGCGCACCGCTTGACCCTTCCAAGCTTGA
CTTTTGCCGCGTGCTCTACGACTACACCCCTGAAGCCCAGGAGAGCTCCG
GCATCGATCTGGCCGTGAAGAAGGGCGACATCGTCGCTGTCCTCAGCAAA
TCCGATCCGATGGGTAATGCCTCGGAGTGGTGGCGTTGCCGTGCTCGTGA
TGGCCGCGTTGGATACTTGCCGGGACCGTACCTGGAGACTATCCAGCGCC
GCCCACAACAGCAAGCGATCACCTCGGGCAGCGAAGCCGGCAGTCGCAGC
AACTCGATGCAGGCGAGCGCATCCGAGGAGATCGCCACGGAAGCCAAGAA
GCCCCAGCTGAAGGGCAAGATGGGTGATATTTCGCTTGAAAGCTTCCAGA
AGAGCGCGTTCTACTCATGAGGTCTCCTGCTTTGGCAACATCATCGGCGG
CTACTCCGACCGCCTCATCCGCGATGACGGCCAGTTCGACTACTCCGACC
GCGGCCGCCAGTGCCTCGGCCCCCACAGCTACAGCATCTTCAACATCTAC
TGCTCCTGATCTCCCGTCCCGTCCTAATTCACTGAATTCTGTTGTCAATC
GCACCGCCTCCAATTACTCTCCCTACTCGGCCTCCCGGTTCGGCGCAAGC
CCTTACGGCGGCTACGGAAGCTACTCGTCGCCGTACTCCCGCTTCGGCAC
GATGGGCTCCATGTACGGAGGCTATGGCGGCATGGGAGGATATGGCGGCA
TGTATGGTGGCATGGGAGGCATGGGGGGGATGTACGGCGGCATGCCCGGT
GATCCCAACGATCCCAACAGCCTGACGAATTCCTTCAGCCAGAGCACCCA
AGCTACGTTCCAGATGATTGAGAGTATCGTGGGTGCGTTTGGAGGATTCG
CTCAGATGCTGGAGAGCACATACATGGCGACGCACAGCTCCTTCTTTGAT
GGCGTCCGTTTCGCCACCCAAACCGTGGGAGAGGGCAGGCGCTGCTGCTG
CCATGGTTTCTGTGGCAGAGCAGTTCGGCAACCTCCGAAACACGCTTGGC
TCCGCCCTCGGTATCTTCACCATCATCCGCTGGTTCAAGACTCTGATCGC
GAAGATCACCGGTCGTCCCCCGCCGGCTGATGCTACCGCCCTCACTCCGT
CCGCCTTTGCAGCATTCCTCAGCGGCCGCTCCTCCCCCGCCACCCTGCCG
GATGGCACTCCCGCTCCCCCCAAGCCCTCCAAGAAGCCGTTCTTCATGTT
CCTGATCGCCGTATTCGGTCTTCCCTACCTGATGGGCAAGCTGATCAAGG
CTCTGGCTCGGTCGCAAGAGGAACGTCGCCAGCTGATGCTGGGTCCAAAT
GGCGAGCCCGTGCAGGGCCAAGGCGCACCGCTTGACCCTTCCAAGCTTGA
CTTTTGCCGCGTGCTCTACGACTACACCCCTGAAGCCCAGGAGAGCTCCG
GCATCGATCTGGCCGTGAAGAAGGGCGACATCGTCGCTGTCCTCAGCAAA
TCCGATCCGATGGGTAATGCCTCGGAGTGGTGGCGTTGCCGTGCTCGTGA
TGGCCGCGTTGGATACTTGCCGGGACCGTACCTGGAGACTATCCAGCGCC
GCCCACAACAGCAAGCGATCACCTCGGGCAGCGAAGCCGGCAGTCGCAGC
AACTCGATGCAGGCGAGCGCATCCGAGGAGATCGCCACGGAAGCCAAGAA
GCCCCAGCTGAAGGGCAAGATGGGTGATATTTCGCTTGAAAGCTTCCAGA
AGAGCGCGTTCTACTCATGAGGTCTCCTGCTTTGGCAACATCATCGGCGG
CTACTCCGACCGCCTCATCCGCGATGACGGCCAGTTCGACTACTCCGACC
GCGGCCGCCAGTGCCTCGGCCCCCACAGCTACAGCATCTTCAACATCTAC
TGCTCCTGATCTCCCGTCCCGTCCTAATTCACTGAATTCTGTTGTCAATC
GCACCGCCTCCAATTACTCTCCCTACTCGGCCTCCCGGTTCGGCGCAAGC
CCTTACGGCGGCTACGGAAGCTACTCGTCGCCGTACTCCCGCTTCGGCAC
GATGGGCTCCATGTACGGAGGCTATGGCGGCATGGGAGGATATGGCGGCA
TGTATGGTGGCATGGGAGGCATGGGGGGGATGTACGGCGGCATGCCCGGT
GATCCCAACGATCCCAACAGCCTGACGAATTCCTTCAGCCAGAGCACCCA
AGCTACGTTCCAGATGATTGAGAGTATCGTGGGTGCGTTTGGAGGATTCG
CTCAGATGCTGGAGAGCACATACATGGCGACGCACAGCTCCTTCTTTGAT
GGCGTCCGTTTCGCCACCCAAACCGTGGGAGAGGGCAGGCGCTGCTGCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016560protein import into peroxisome matrix, docking
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_300301M747DRAFT_300301Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300301-T1M747DRAFT_300301-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300301-T1.cdsM747DRAFT_300301-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300301-T1.utr3p1M747DRAFT_300301-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300301-T1.exon3M747DRAFT_300301-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_300301-T1.exon2M747DRAFT_300301-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_300301-T1.exon1M747DRAFT_300301-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_300301-T1.utr5p1M747DRAFT_300301-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR007223
DBxrefInterPro:IPR001452
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
DBxrefPFAM:PF04088
Productperoxisomal membrane protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851984.1supercontigKZ851984.1:6380..8595 -
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