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M747DRAFT_301646-T1, M747DRAFT_301646-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_301646-T1
Unique NameM747DRAFT_301646-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:598052..599178+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_301646-T1 ID=M747DRAFT_301646-T1|Name=M747DRAFT_301646-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1127bp|location=Sequence derived from alignment at KZ851901.1:598052..599178+ (Aspergillus niger ATCC 13496)
ATGTCCGCCATCGAGCCAGTCGTGCGTACCGCCCCATCCCGAAACTATCA
TCCACATACAATCTCCTTGAAATTGAATACACATGTGTCAAATGAGGGCG
TTCAGGGTCCTGGAGTCGGAAATTCATATACAGAAGTACATTTGTCGCTG
ACTTGAATTCTTGGGTTTTCGCAGGTCGTCATTGACGGCAAGGGACACCT
CTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGA
AGATTGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTC
CGTGCGAAGCGTATGTTCTATCCGACCCGGTTTCTTTCGATTTCATTCTG
CAATATGGATTTTCTTTGGGATGAATGGGAGTGCGACGGTTTTCGACATA
TGGAGGAGGACATCGGCAATTGATTGGAATATCTCTGGAGGAACAAGCAA
CACATCTGTGCTGGTGGACAACGGGCTGACCTGGATTTCGCGATATAGTC
AAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGG
AGGTGAGACTACCCGATGACTTTCCCCCTCTGATGGGGAAAGACGACACT
TATATCTTTTGCGGGACTCCGTGCTGAATCGCTACAGGTCCCTTCCACTT
CCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCC
ACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAG
GGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGC
TCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTC
GTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGGTAC
GTTTATGCTGAAGTGGAGAGGATAAAATGGGAGATGTTGGAATATTGGGT
GCAGAAGGCTAACGGATTCGTTTTTTCTACTCTTACAGACTTGAGGAGCG
CAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCC
GCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAG
AGCCAGCTCGCTCAGTACGGATACTAG
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Coding sequence (CDS) from alignment at KZ851901.1:598052..599178+

>M747DRAFT_301646-T1 ID=M747DRAFT_301646-T1|Name=M747DRAFT_301646-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3045bp|location=Sequence derived from alignment at KZ851901.1:598052..599178+ (Aspergillus niger ATCC 13496)
ATGTCCGCCATCGAGCCAGTCGTCGTCATTGACGGCAAGGGACACCTCTT
GGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGA
TTGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGT
GCGAAGCTCAAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCC
CACCCGCGGAGGTCCCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACA
AGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCT
ATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAA
GAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCG
GCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAG
TACCAGGACGTTGTTGCCAGACTTGAGGAGCGCAGAAAGGTTAAGAGCAG
TGCATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCGTCCACGCCC
AGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTCGCTCAGTAC
GGATACTAGATGTCCGCCATCGAGCCAGTCGTCGTCATTGACGGCAAGGG
ACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACG
GTCAGAAGATTGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAG
TTCTTCCGTGCGAAGCTCAAGTACCACGCCTACCTTCGCAAGATGACTCG
TTTCAACCCCACCCGCGGAGGTCCCTTCCACTTCCGTGCCCCCTCCCGCA
TCTTCTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGT
GCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTA
CGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCC
TGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTT
GGCTGGAAGTACCAGGACGTTGTTGCCAGACTTGAGGAGCGCAGAAAGGT
TAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCG
TCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTC
GCTCAGTACGGATACTAGATGTCCGCCATCGAGCCAGTCGTCGTCATTGA
CGGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGC
TGCTCAACGGTCAGAAGATTGTCGTCGTGAGATGTGAAGCCCTCAACATC
TCCGGCGAGTTCTTCCGTGCGAAGCTCAAGTACCACGCCTACCTTCGCAA
GATGACTCGTTTCAACCCCACCCGCGGAGGTCCCTTCCACTTCCGTGCCC
CCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACC
GCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCC
TCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTG
TTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGC
CACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGACTTGAGGAGCG
CAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCC
GCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAG
AGCCAGCTCGCTCAGTACGGATACTAGATGTCCGCCATCGAGCCAGTCGT
CGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACTGTTG
CTAAGCAGCTGCTCAACGGTCAGAAGATTGTCGTCGTGAGATGTGAAGCC
CTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCTCAAGTACCACGCCTA
CCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGAGGTCCCTTCCACT
TCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCC
CACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGA
GGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGG
CTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGT
CGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGACT
TGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGG
CCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAG
CAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAGATGTCCGCCATCGA
GCCAGTCGTCGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTGGCCA
GCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGATTGTCGTCGTGAGA
TGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCTCAAGTA
CCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGAGGTC
CCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGC
ATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAA
GGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCG
TTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGC
ACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGT
TGCCAGACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGC
GCAAGAAGGCCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGT
GTTAACGAGCAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP46M747DRAFT_301646Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_301646-T1M747DRAFT_301646-T1-proteinAspergillus niger ATCC 13496polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_301646-T1.exon1M747DRAFT_301646-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_301646-T1.exon2M747DRAFT_301646-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_301646-T1.exon3M747DRAFT_301646-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_301646-T1.exon4M747DRAFT_301646-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_301646-T1.exon5M747DRAFT_301646-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_301646-T1.cdsM747DRAFT_301646-T1.cdsAspergillus niger ATCC 13496CDS


Properties
Property NameValue
DBxrefInterPro:IPR023563
DBxrefInterPro:IPR005755
DBxrefInterPro:IPR036899
DBxrefInterPro:IPR005822
DBxrefPFAM:PF00572
Product60S ribosomal protein L16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:598052..599178 +
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