You are here

Home

M747DRAFT_311033-T1, M747DRAFT_311033-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_311033-T1
Unique NameM747DRAFT_311033-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851972.1:20907..21966+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_311033-T1 ID=M747DRAFT_311033-T1|Name=M747DRAFT_311033-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1060bp|location=Sequence derived from alignment at KZ851972.1:20907..21966+ (Aspergillus niger ATCC 13496)
ATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGC
CCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCA
GCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTC
GTCCTGATGGGTAAGAACACCATGGTATGATGATCCTCTGAAACCACCGG
TGCCCGTTCCGCATGCTGATGAGTTGTCCAGGTTCGCCGTGCCATCAAGG
GCTTCGTCAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAG
GGTAAGTGAAGTTGCTTCCAGAGTCTGCGGCGATGTCAATTGGCTAACAT
TTGCCTTCCGCACAGGTAACGTTGGTTTCATCTTCACCAACGGTGACCTC
AAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTCCCGCTCG
TGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGTAACACCG
GTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGTCCCCACC
AAGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAAGCTCGTTGA
GGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAACATGCTGA
ACATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTACGACCAG
GGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTCAGCTCCT
CGAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCTCCCTGGCTG
TCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAACAGCTAC
AAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGCCCGAGAT
TGAGGAGCTCAAGGACCGTATTGCCAACCCTGACGCTTACGCCTCCGCTG
CTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGTGGTGCTCCCGCCGCTGAG
GCTCCCAAGGAGGAAGAGGAGGAGTCCGATGAGGACATGGGCTTCGGCCT
CTTCGACTAA
back to top

Coding sequence (CDS) from alignment at KZ851972.1:20907..21966+

>M747DRAFT_311033-T1 ID=M747DRAFT_311033-T1|Name=M747DRAFT_311033-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2817bp|location=Sequence derived from alignment at KZ851972.1:20907..21966+ (Aspergillus niger ATCC 13496)
ATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGC
CCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCA
GCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTC
GTCCTGATGGGTAAGAACACCATGGTTCGCCGTGCCATCAAGGGCTTCGT
CAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGGTAACG
TTGGTTTCATCTTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATC
CTGGCCAACCGTGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGG
CGATGTCTGGGTCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCT
CTTTCTTCCAGGCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATT
GAAATTACCACCGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCC
CTCCGAGGCCACCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATG
GTATGACCATCCAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCT
GTCCTGGACATTGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCAT
TAACACCATCACCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCG
CTGTCATGCACTCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCT
GTTGAGACCGAGTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTAT
TGCCAACCCTGACGCTTACGCCTCCGCTGCTCCTGCCGCTGCCGCTGCCC
CTGCTGCCGGTGGTGCTCCCGCCGCTGAGGCTCCCAAGGAGGAAGAGGAG
GAGTCCGATGAGGACATGGGCTTCGGCCTCTTCGACTAAATGGGGGGCAA
GTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCTCGATG
AGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCAGCTCTCAGCAG
ATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTGATGGG
TAAGAACACCATGGTTCGCCGTGCCATCAAGGGCTTCGTCAACGACAACC
CCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGGTAACGTTGGTTTCATC
TTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACCG
TGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGGG
TCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCAG
GCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCAC
CGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCA
CCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATGGTATGACCATC
CAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACAT
TGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATCA
CCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCAC
TCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCGA
GTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTATTGCCAACCCTG
ACGCTTACGCCTCCGCTGCTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGT
GGTGCTCCCGCCGCTGAGGCTCCCAAGGAGGAAGAGGAGGAGTCCGATGA
GGACATGGGCTTCGGCCTCTTCGACTAAATGGGGGGCAAGTCTGCTACCA
AGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCTCGATGAGTACAAGACG
GTCTTCATTGTCGGTGTCGACAATGTCAGCTCTCAGCAGATGCACGAGAT
TCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTGATGGGTAAGAACACCA
TGGTTCGCCGTGCCATCAAGGGCTTCGTCAACGACAACCCCGAGTACGAG
CGTCTGCTCCCCTTCGTTAAGGGTAACGTTGGTTTCATCTTCACCAACGG
TGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTC
CCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGT
AACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGT
CCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAAGC
TCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAAC
ATGCTGAACATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTA
CGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTC
AGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCTCC
CTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAA
CAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGC
CCGAGATTGAGGAGCTCAAGGACCGTATTGCCAACCCTGACGCTTACGCC
TCCGCTGCTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGTGGTGCTCCCGC
CGCTGAGGCTCCCAAGGAGGAAGAGGAGGAGTCCGATGAGGACATGGGCT
TCGGCCTCTTCGACTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
60SM747DRAFT_311033Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_311033-T1.exon1M747DRAFT_311033-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_311033-T1.exon2M747DRAFT_311033-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_311033-T1.exon3M747DRAFT_311033-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_311033-T1.cdsM747DRAFT_311033-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_311033-T1M747DRAFT_311033-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264G1I
DBxrefInterPro:IPR040637
DBxrefInterPro:IPR030670
DBxrefInterPro:IPR001790
DBxrefPFAM:PF17777
DBxrefPFAM:PF00466
DBxrefPFAM:PF00428
Product60s acidic ribosomal protein P2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851972.1supercontigKZ851972.1:20907..21966 +
Powered by Drupal