You are here

Home

M747DRAFT_312236-T1, M747DRAFT_312236-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_312236-T1
Unique NameM747DRAFT_312236-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:1144567..1146608+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_312236-T1 ID=M747DRAFT_312236-T1|Name=M747DRAFT_312236-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2042bp|location=Sequence derived from alignment at KZ851901.1:1144567..1146608+ (Aspergillus niger ATCC 13496)
ATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCCGA
CCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATGGG
GATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAGAG
GACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTTGC
TGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGGCGTG
CTGAGATCTTGCAGTTCGCTATGTAAGTAGGTGGTCTGCTGGTAGCAATG
GTGGGCAATTGCGCTAATTGATTTGTTGCGGGGTGAAGGCAGGCGCATAT
GGAAGCTTTGTTCGCTTTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATA
CCCCTCGCCAGGCGGAGACTTCGATGTCGGCGTTCCTGAAACAGGTTGCG
CCGCTTGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGA
GGCCGCTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGA
ACTTCAATGCCGCTGCGAATAAATTGCTCAACTCGGCGACGCGATTGGAA
GAAGAGGTCGCTTCGGAGACGAAGTACTGGGATGAAGTATTGGCGGTTAA
GGAGAAGGGATGGAAGGTCTGCAGGTTGCCCCGGGAGAGAACTGCGCTGG
GAGTACAATATGGGTTCTTGGAAGGTAGGATGGCTACGTGCTTTGCTGGA
TTGATGCTGACTGTGTTCCTATAGCTACGCCTATATTCCGCGACCGGGGT
CTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTAATACTGGATAAGGG
ACTGGCACCACAGAAAACGAGGACGGTTCGAGTGCGTGTGAAGCACCGCG
GACAACTTACGGGATGCTCTAAAATGCCGGATCCGATCCCCGATGCAGCG
TCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACAGTGTACGAGGAAGA
GCTATTCCACGAGTTGATGCGCGAAGCGCGTATCATGGGAAGTCATGGTG
TGACGACTCGTCAGAACCTGGTCCGACTGCCGATATCCGAAGACCAAGAG
ATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACGCCCGACGAAGACAA
GATCGAGTCAACAGAACACGATGTCCTTGCTAATGGGCTCTCGCACTCAA
TTCGGATCCTGCTCGCGTATGCACACCGCCAGAACCTGCGACGCAGAACC
CAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTTACCCCCGAGTATCA
GCTCCTGCGCCCTGTCATGGCGTATCTCCAACACAGCTCGCACGTCCGCT
GGTTGGAGTCTTTCATGAATGATATATACCGGGTTCTGCGGGCGGCAGGG
ATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGAA
GGTGCAGGCTGTTCCGAAGGTAGAGAGTCTGGTACAACAGTTCCTGATGC
CCTTCGAATCGACATTTTCCGGCCATCTGATCACCCCTCAAAGCTCTTTT
CGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCATTTGGCACCCACTA
CGACATTTCCATTGACCTACCTCACCACCCCGAAGTTCAGCCTCCCGGTC
GGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCATGCATTTCGTCAAG
TTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCGAAGACGACCAAAAA
TACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGACGTGGGAGGCGGCAT
ATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAAG
AAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAAGTGGAAACATTTTC
ACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGGCCCCAAGGCACCAA
GTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAGATTCTAAGCCTGGT
CTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAGTCATAA
back to top

Coding sequence (CDS) from alignment at KZ851901.1:1144567..1146608+

>M747DRAFT_312236-T1 ID=M747DRAFT_312236-T1|Name=M747DRAFT_312236-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5778bp|location=Sequence derived from alignment at KZ851901.1:1144567..1146608+ (Aspergillus niger ATCC 13496)
ATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCCGA
CCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATGGG
GATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAGAG
GACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTTGC
TGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGGCGTG
CTGAGATCTTGCAGTTCGCTATGCAGGCGCATATGGAAGCTTTGTTCGCT
TTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATACCCCTCGCCAGGCGGA
GACTTCGATGTCGGCGTTCCTGAAACAGGTTGCGCCGCTTGGGTCGTTGA
ATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGAGGCCGCTGTGCAGGAT
GTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGAACTTCAATGCCGCTGC
GAATAAATTGCTCAACTCGGCGACGCGATTGGAAGAAGAGGTCGCTTCGG
AGACGAAGTACTGGGATGAAGTATTGGCGGTTAAGGAGAAGGGATGGAAG
GTCTGCAGGTTGCCCCGGGAGAGAACTGCGCTGGGAGTACAATATGGGTT
CTTGGAAGCTACGCCTATATTCCGCGACCGGGGTCTTGCTGCTCTACGGA
GGGCTGATAATGGAAGCTTAATACTGGATAAGGGACTGGCACCACAGAAA
ACGAGGACGGTTCGAGTGCGTGTGAAGCACCGCGGACAACTTACGGGATG
CTCTAAAATGCCGGATCCGATCCCCGATGCAGCGTCGGTCGAGCGCAGGA
TTTTGCAAGCACGCGACACAGTGTACGAGGAAGAGCTATTCCACGAGTTG
ATGCGCGAAGCGCGTATCATGGGAAGTCATGGTGTGACGACTCGTCAGAA
CCTGGTCCGACTGCCGATATCCGAAGACCAAGAGATCCTGCTGGATCTGG
TAGATGCGGACCGTGAAACGCCCGACGAAGACAAGATCGAGTCAACAGAA
CACGATGTCCTTGCTAATGGGCTCTCGCACTCAATTCGGATCCTGCTCGC
GTATGCACACCGCCAGAACCTGCGACGCAGAACCCAACCGCCGCCCCCGC
TCTCCCAGAAACGTCGGCTTACCCCCGAGTATCAGCTCCTGCGCCCTGTC
ATGGCGTATCTCCAACACAGCTCGCACGTCCGCTGGTTGGAGTCTTTCAT
GAATGATATATACCGGGTTCTGCGGGCGGCAGGGATCGAGCGTGATTTCC
ACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGAAGGTGCAGGCTGTTCCG
AAGGTAGAGAGTCTGGTACAACAGTTCCTGATGCCCTTCGAATCGACATT
TTCCGGCCATCTGATCACCCCTCAAAGCTCTTTTCGCGTGAAAATCCGCA
CCAACCCGGTGTCGCCGCCATTTGGCACCCACTACGACATTTCCATTGAC
CTACCTCACCACCCCGAAGTTCAGCCTCCCGGTCGGGTTGGACTGCAGAA
TGAAGCAGCTGCAGCTCTCATGCATTTCGTCAAGTTGGACATCGTGTCGG
CCATCGCGCTCCAGGGCTCGAAGACGACCAAAAATACCACCAAGAAAGAA
GGCGCCGAGGGGACTTTGACGTGGGAGGCGGCATATCCGCACCACGGCGA
ACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAAGAAGCTGAAAATCAGCC
TGTCACGGGAGGAATTGAAAGTGGAAACATTTTCACTTCGGGGACTTGAA
GGGTTTGGCCGATCGGGCGGCCCCAAGGCACCAAGTTTGCAGTCTCAGAC
GTGGACAGCCACTCAGACAGATTCTAAGCCTGGTCTGATGGATTTTGTCG
CGGAGGTTTCGCGGGAGCAGTCATAAATGTCCGACTCATTCAGCCTCCCC
CTGCGCCCGCTCACCGAGAAGCCCGACCGCCCCGATACCCTTCCAATCGA
GATCGCCCAAATCAACGCCCGATGGGGATCTTTCCGCGACGTGAACGAAG
AGACACTGCTCGCCAAGATCGAAGAGGACAAGAACCGGGACCCATGGGAA
GAGGAAGATGAGGACGAAAAACTTGCTGAGGATGTGGACTCAACCGAGCG
TCTGGAAACATTGTACAAGCGGCGTGCTGAGATCTTGCAGTTCGCTATGC
AGGCGCATATGGAAGCTTTGTTCGCTTTGGATTTTGTTTCCCTTTTGCTT
TCGAAGCATACCCCTCGCCAGGCGGAGACTTCGATGTCGGCGTTCCTGAA
ACAGGTTGCGCCGCTTGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGC
CGAAGTCGGAGGCCGCTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGG
AGGGCGCAGAACTTCAATGCCGCTGCGAATAAATTGCTCAACTCGGCGAC
GCGATTGGAAGAAGAGGTCGCTTCGGAGACGAAGTACTGGGATGAAGTAT
TGGCGGTTAAGGAGAAGGGATGGAAGGTCTGCAGGTTGCCCCGGGAGAGA
ACTGCGCTGGGAGTACAATATGGGTTCTTGGAAGCTACGCCTATATTCCG
CGACCGGGGTCTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTAATAC
TGGATAAGGGACTGGCACCACAGAAAACGAGGACGGTTCGAGTGCGTGTG
AAGCACCGCGGACAACTTACGGGATGCTCTAAAATGCCGGATCCGATCCC
CGATGCAGCGTCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACAGTGT
ACGAGGAAGAGCTATTCCACGAGTTGATGCGCGAAGCGCGTATCATGGGA
AGTCATGGTGTGACGACTCGTCAGAACCTGGTCCGACTGCCGATATCCGA
AGACCAAGAGATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACGCCCG
ACGAAGACAAGATCGAGTCAACAGAACACGATGTCCTTGCTAATGGGCTC
TCGCACTCAATTCGGATCCTGCTCGCGTATGCACACCGCCAGAACCTGCG
ACGCAGAACCCAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTTACCC
CCGAGTATCAGCTCCTGCGCCCTGTCATGGCGTATCTCCAACACAGCTCG
CACGTCCGCTGGTTGGAGTCTTTCATGAATGATATATACCGGGTTCTGCG
GGCGGCAGGGATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCTGTGA
GCCTTCCGAAGGTGCAGGCTGTTCCGAAGGTAGAGAGTCTGGTACAACAG
TTCCTGATGCCCTTCGAATCGACATTTTCCGGCCATCTGATCACCCCTCA
AAGCTCTTTTCGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCATTTG
GCACCCACTACGACATTTCCATTGACCTACCTCACCACCCCGAAGTTCAG
CCTCCCGGTCGGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCATGCA
TTTCGTCAAGTTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCGAAGA
CGACCAAAAATACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGACGTGG
GAGGCGGCATATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTGCTGG
CCAAAGCAAGAAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAAGTGG
AAACATTTTCACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGGCCCC
AAGGCACCAAGTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAGATTC
TAAGCCTGGTCTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAGTCAT
AAATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCC
GACCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATG
GGGATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAG
AGGACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTT
GCTGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGGCG
TGCTGAGATCTTGCAGTTCGCTATGCAGGCGCATATGGAAGCTTTGTTCG
CTTTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATACCCCTCGCCAGGCG
GAGACTTCGATGTCGGCGTTCCTGAAACAGGTTGCGCCGCTTGGGTCGTT
GAATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGAGGCCGCTGTGCAGG
ATGTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGAACTTCAATGCCGCT
GCGAATAAATTGCTCAACTCGGCGACGCGATTGGAAGAAGAGGTCGCTTC
GGAGACGAAGTACTGGGATGAAGTATTGGCGGTTAAGGAGAAGGGATGGA
AGGTCTGCAGGTTGCCCCGGGAGAGAACTGCGCTGGGAGTACAATATGGG
TTCTTGGAAGCTACGCCTATATTCCGCGACCGGGGTCTTGCTGCTCTACG
GAGGGCTGATAATGGAAGCTTAATACTGGATAAGGGACTGGCACCACAGA
AAACGAGGACGGTTCGAGTGCGTGTGAAGCACCGCGGACAACTTACGGGA
TGCTCTAAAATGCCGGATCCGATCCCCGATGCAGCGTCGGTCGAGCGCAG
GATTTTGCAAGCACGCGACACAGTGTACGAGGAAGAGCTATTCCACGAGT
TGATGCGCGAAGCGCGTATCATGGGAAGTCATGGTGTGACGACTCGTCAG
AACCTGGTCCGACTGCCGATATCCGAAGACCAAGAGATCCTGCTGGATCT
GGTAGATGCGGACCGTGAAACGCCCGACGAAGACAAGATCGAGTCAACAG
AACACGATGTCCTTGCTAATGGGCTCTCGCACTCAATTCGGATCCTGCTC
GCGTATGCACACCGCCAGAACCTGCGACGCAGAACCCAACCGCCGCCCCC
GCTCTCCCAGAAACGTCGGCTTACCCCCGAGTATCAGCTCCTGCGCCCTG
TCATGGCGTATCTCCAACACAGCTCGCACGTCCGCTGGTTGGAGTCTTTC
ATGAATGATATATACCGGGTTCTGCGGGCGGCAGGGATCGAGCGTGATTT
CCACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGAAGGTGCAGGCTGTTC
CGAAGGTAGAGAGTCTGGTACAACAGTTCCTGATGCCCTTCGAATCGACA
TTTTCCGGCCATCTGATCACCCCTCAAAGCTCTTTTCGCGTGAAAATCCG
CACCAACCCGGTGTCGCCGCCATTTGGCACCCACTACGACATTTCCATTG
ACCTACCTCACCACCCCGAAGTTCAGCCTCCCGGTCGGGTTGGACTGCAG
AATGAAGCAGCTGCAGCTCTCATGCATTTCGTCAAGTTGGACATCGTGTC
GGCCATCGCGCTCCAGGGCTCGAAGACGACCAAAAATACCACCAAGAAAG
AAGGCGCCGAGGGGACTTTGACGTGGGAGGCGGCATATCCGCACCACGGC
GAACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAAGAAGCTGAAAATCAG
CCTGTCACGGGAGGAATTGAAAGTGGAAACATTTTCACTTCGGGGACTTG
AAGGGTTTGGCCGATCGGGCGGCCCCAAGGCACCAAGTTTGCAGTCTCAG
ACGTGGACAGCCACTCAGACAGATTCTAAGCCTGGTCTGATGGATTTTGT
CGCGGAGGTTTCGCGGGAGCAGTCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SRB4M747DRAFT_312236Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_312236-T1.exon1M747DRAFT_312236-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_312236-T1.exon2M747DRAFT_312236-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_312236-T1.exon3M747DRAFT_312236-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_312236-T1.cdsM747DRAFT_312236-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_312236-T1M747DRAFT_312236-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019313
DBxrefPFAM:PF10156
ProductRNA polymerase II mediator complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:1144567..1146608 +
Powered by Drupal