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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851908.1:604341..605292- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_313872-T1 ID=M747DRAFT_313872-T1|Name=M747DRAFT_313872-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=952bp|location=Sequence derived from alignment at KZ851908.1:604341..605292- (Aspergillus niger ATCC 13496)
ATGGCATCCACCTCCGGGGTAGGGTCGTATTCGAACCCTCTGAAGAAATT
CAAGTATGTCCCGCCTGCAGCATAACTTTCGGCTTTCCTTAATGTGCGGC
TAATCGAATTGCAGGCTGGTTTTCTTGGGCGAGCAGAGTGGTACGGATAT
CTTCTGCGACGATACTCCAATCATTGGCGCCACCCGGTCTCTGACATCTG
CCTTACAGTTGGAAAAACCTCATTGATCACACGGTTCATGTACGATTCAT
TCGACAACACGTACCAAGCGACCATTGGAATCGATTTCTTGTCAAAGGTA
TACTACGCCTAGTCGACTGCTTGTGCCCTGCATTAGCAGGCCCTCACCGA
GCCATTCTCACACGGTCTCATGGTTCCCAATACGCTCGCGCTGCTGCAAA
AAGCTAATTCGCATCGCTCGTCTTAGACTATGTACCTGGAAGACAGAACT
GTGCGCCTTCAACTTTGGGACACAGCTGGTCAAGAACGTTTCCGATCTTT
GATTCCTTCCTACATCCGTGACTCCAGTGTCGCTGTGGTGGTCTACGATA
TCTCCAACGCCAAGTCTTTCCAGAACACACGCAAATGGATCGACGATGTA
CGGGGAGAACGCGGTAACGATGTCATCATCGTCCTGGTGGGCAACAAGAC
CGATCTGAACGACAAGCGCGAGGTCACGACGGCGCAGGGCGAGGAGGAGG
CGAAGAAGAACGGCTTGATGTTCATTGAGACCAGTGCTAAAGTCGGCCAC
AATGTGAAGCAGCTTTTCAGGAGAATTGCGCAAGCCCTACCGGGCATGGA
GGGTGAAGCCAACCGGGGAGACAACCAGAGTCCGTTATCCTTTCCCCGCC
CATGGCTCGAATTACACGGGATGAGTACTGACAACTCTTACAGTGATCGA
TGTCAACATCACTCCGAAAGAGACCACGACCAACGACGGATGCGCCTGCT
AG back to topCoding sequence (CDS) from alignment at KZ851908.1:604341..605292- >M747DRAFT_313872-T1 ID=M747DRAFT_313872-T1|Name=M747DRAFT_313872-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3150bp|location=Sequence derived from alignment at KZ851908.1:604341..605292- (Aspergillus niger ATCC 13496)
TGATCGATGTCAACATCACTCCGAAAGAGACCACGACCAACGACGGATGC
GCCTGCTAGACTATGTACCTGGAAGACAGAACTGTGCGCCTTCAACTTTG
GGACACAGCTGGTCAAGAACGTTTCCGATCTTTGATTCCTTCCTACATCC
GTGACTCCAGTGTCGCTGTGGTGGTCTACGATATCTCCAACGCCAAGTCT
TTCCAGAACACACGCAAATGGATCGACGATGTACGGGGAGAACGCGGTAA
CGATGTCATCATCGTCCTGGTGGGCAACAAGACCGATCTGAACGACAAGC
GCGAGGTCACGACGGCGCAGGGCGAGGAGGAGGCGAAGAAGAACGGCTTG
ATGTTCATTGAGACCAGTGCTAAAGTCGGCCACAATGTGAAGCAGCTTTT
CAGGAGAATTGCGCAAGCCCTACCGGGCATGGAGGGTGAAGCCAACCGGG
GAGACAACCAGATTGGAAAAACCTCATTGATCACACGGTTCATGTACGAT
TCATTCGACAACACGTACCAAGCGACCATTGGAATCGATTTCTTGTCAAA
GGCTGGTTTTCTTGGGCGAGCAGAGTGATGGCATCCACCTCCGGGGTAGG
GTCGTATTCGAACCCTCTGAAGAAATTCAATGATCGATGTCAACATCACT
CCGAAAGAGACCACGACCAACGACGGATGCGCCTGCTAGACTATGTACCT
GGAAGACAGAACTGTGCGCCTTCAACTTTGGGACACAGCTGGTCAAGAAC
GTTTCCGATCTTTGATTCCTTCCTACATCCGTGACTCCAGTGTCGCTGTG
GTGGTCTACGATATCTCCAACGCCAAGTCTTTCCAGAACACACGCAAATG
GATCGACGATGTACGGGGAGAACGCGGTAACGATGTCATCATCGTCCTGG
TGGGCAACAAGACCGATCTGAACGACAAGCGCGAGGTCACGACGGCGCAG
GGCGAGGAGGAGGCGAAGAAGAACGGCTTGATGTTCATTGAGACCAGTGC
TAAAGTCGGCCACAATGTGAAGCAGCTTTTCAGGAGAATTGCGCAAGCCC
TACCGGGCATGGAGGGTGAAGCCAACCGGGGAGACAACCAGATTGGAAAA
ACCTCATTGATCACACGGTTCATGTACGATTCATTCGACAACACGTACCA
AGCGACCATTGGAATCGATTTCTTGTCAAAGGCTGGTTTTCTTGGGCGAG
CAGAGTGATGGCATCCACCTCCGGGGTAGGGTCGTATTCGAACCCTCTGA
AGAAATTCAATGATCGATGTCAACATCACTCCGAAAGAGACCACGACCAA
CGACGGATGCGCCTGCTAGACTATGTACCTGGAAGACAGAACTGTGCGCC
TTCAACTTTGGGACACAGCTGGTCAAGAACGTTTCCGATCTTTGATTCCT
TCCTACATCCGTGACTCCAGTGTCGCTGTGGTGGTCTACGATATCTCCAA
CGCCAAGTCTTTCCAGAACACACGCAAATGGATCGACGATGTACGGGGAG
AACGCGGTAACGATGTCATCATCGTCCTGGTGGGCAACAAGACCGATCTG
AACGACAAGCGCGAGGTCACGACGGCGCAGGGCGAGGAGGAGGCGAAGAA
GAACGGCTTGATGTTCATTGAGACCAGTGCTAAAGTCGGCCACAATGTGA
AGCAGCTTTTCAGGAGAATTGCGCAAGCCCTACCGGGCATGGAGGGTGAA
GCCAACCGGGGAGACAACCAGATTGGAAAAACCTCATTGATCACACGGTT
CATGTACGATTCATTCGACAACACGTACCAAGCGACCATTGGAATCGATT
TCTTGTCAAAGGCTGGTTTTCTTGGGCGAGCAGAGTGATGGCATCCACCT
CCGGGGTAGGGTCGTATTCGAACCCTCTGAAGAAATTCAATGATCGATGT
CAACATCACTCCGAAAGAGACCACGACCAACGACGGATGCGCCTGCTAGA
CTATGTACCTGGAAGACAGAACTGTGCGCCTTCAACTTTGGGACACAGCT
GGTCAAGAACGTTTCCGATCTTTGATTCCTTCCTACATCCGTGACTCCAG
TGTCGCTGTGGTGGTCTACGATATCTCCAACGCCAAGTCTTTCCAGAACA
CACGCAAATGGATCGACGATGTACGGGGAGAACGCGGTAACGATGTCATC
ATCGTCCTGGTGGGCAACAAGACCGATCTGAACGACAAGCGCGAGGTCAC
GACGGCGCAGGGCGAGGAGGAGGCGAAGAAGAACGGCTTGATGTTCATTG
AGACCAGTGCTAAAGTCGGCCACAATGTGAAGCAGCTTTTCAGGAGAATT
GCGCAAGCCCTACCGGGCATGGAGGGTGAAGCCAACCGGGGAGACAACCA
GATTGGAAAAACCTCATTGATCACACGGTTCATGTACGATTCATTCGACA
ACACGTACCAAGCGACCATTGGAATCGATTTCTTGTCAAAGGCTGGTTTT
CTTGGGCGAGCAGAGTGATGGCATCCACCTCCGGGGTAGGGTCGTATTCG
AACCCTCTGAAGAAATTCAATGATCGATGTCAACATCACTCCGAAAGAGA
CCACGACCAACGACGGATGCGCCTGCTAGACTATGTACCTGGAAGACAGA
ACTGTGCGCCTTCAACTTTGGGACACAGCTGGTCAAGAACGTTTCCGATC
TTTGATTCCTTCCTACATCCGTGACTCCAGTGTCGCTGTGGTGGTCTACG
ATATCTCCAACGCCAAGTCTTTCCAGAACACACGCAAATGGATCGACGAT
GTACGGGGAGAACGCGGTAACGATGTCATCATCGTCCTGGTGGGCAACAA
GACCGATCTGAACGACAAGCGCGAGGTCACGACGGCGCAGGGCGAGGAGG
AGGCGAAGAAGAACGGCTTGATGTTCATTGAGACCAGTGCTAAAGTCGGC
CACAATGTGAAGCAGCTTTTCAGGAGAATTGCGCAAGCCCTACCGGGCAT
GGAGGGTGAAGCCAACCGGGGAGACAACCAGATTGGAAAAACCTCATTGA
TCACACGGTTCATGTACGATTCATTCGACAACACGTACCAAGCGACCATT
GGAATCGATTTCTTGTCAAAGGCTGGTTTTCTTGGGCGAGCAGAGTGATG
GCATCCACCTCCGGGGTAGGGTCGTATTCGAACCCTCTGAAGAAATTCAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264JHE |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR001806 |
| DBxref | InterPro:IPR005225 |
| DBxref | PFAM:PF09439 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF04670 |
| DBxref | PFAM:PF00025 |
| Product | Ras- protein Rab-6A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851908.1 | supercontig | KZ851908.1:604341..605292 - |
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