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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851913.1:290578..293034- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_314829-T1 ID=M747DRAFT_314829-T1|Name=M747DRAFT_314829-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2457bp|location=Sequence derived from alignment at KZ851913.1:290578..293034- (Aspergillus niger ATCC 13496)
ATGTTTCACACGTTTGAAGGGTTCGAGAACCCAACTCTTCCGGCTGCTGT
GCGCGGACGCAATCAACGTCAACAATCTGTCGGTCGCCGAGTCACGACGC
TCCGCGCCTGCACATCTTGTCGGCACCGAAAAATAAAGTGTGATGGTGAA
AAGCCATGTGAAGCATGCAGATGGTATAAAAAAGCAGACTTGTGTCAGTA
CTCTGATCCTCGGCCATCTCGCAGGTGTGACTGTCCCCTTCTTCCATAGC
AGCCGGCATTGAGGGACGACCCAAAACTGACAAATGTATCGATCAAGCAG
GCATGTGGAGAAACTGTCGACCACACTCGATGAATTCAGGGGAGTGCTTG
ACAAGCTCTTCCCTGGCATTCCAGCGGAGACCCTGGTCAACTTGCCTCGG
GACAAGCTTCTGGAGCTGACAGGCAAGGGGCCTTCCCAGATGCAGACGCA
AGCGCCACACCCGGCATCCCCAGCAACCTCGGCATCGGTAGAGGCTCACG
CATCGCCAGCATCCAGCGAAGACGGCAATCTCGAGTCTCTACAGACAATA
CCTGATCACACAACTGATGATCGTGAATTGAAAGGTTCTGAGCTAACGAG
TACCGTATCCGACGACGTTAACGCTTTATCTCTCTCGGCCAAACAGCCAT
CTTCCTATTTGGGTGTCTCTTCCATCCATGCTGTGCTAAAGGTAATAGTA
TGGCTGGAGCCGAGCTCTCTCTCTCATTTGTCTCGCGCACCCGCCACAGG
AGTCCGTCGAGAATCTGTCATGGACATTGCATCTCCAGAGGCCCAGGCCT
GGCAGGTTTTTGGGTCACAGCCCCATCATGGCACGTCCACCCATAGCCCA
CTCCAGGTTCCCGAGACTCAACTGCTCGATGCTTACTTCACCTACTTCCA
ACCTTTTGTTCCAATGCTGGACGAACAATATTTTCGCCAAACGTATCTTT
CTGCGCGCAGGAAAGACAAGCAATGGCTCGCGTTACTTAACATTGTCTTT
GCTTTGGGCAGCATAGCAGCCACCCCGGCCGACGACATGTCCCATCAAGC
ATATTATATGCGGTCTATGAGCCATTTGAATTTGGAAAGCCTTGGATCAC
CACACGTGGAGACTATCCAAGCTCTGGGCCTCATGGGTGGCTATTACCTT
CACTATAGCAGCCAACCCAACCTCGCGTACTCCATGATGGGAGCCGCGTT
GCGCATGGCGGCTGCTCTGGGGCTACATAAGGAAGTGTCAGATGGCCAGT
ATGGCAATGGCAGGAATAGGCTATCTTCAGTTGACCATAAACGTCGGGTA
TGGTGGTCTCTTTTCTGTCTGGACACGTGGGGTGGCATGACCTTGGGACG
GCCAAGCATGGGTCGGCTGGGTCCAGCAATCACCGTTAAGCTACCACATT
ACAGAGAAACAGTATGTGATACGTTGTGTGTTGTAATGGGTCTAACTGAC
ATACTTAGGGCAATGTGCTCGACCTTCTACCACTTTTGGAAAATGTTCGC
TTTTGCAAGATCGCGACACAGATACAGGAGGTCCTGGCCGTGGCACCGCT
GACAAAACCTCACGAAATGGCACATCTTGATAGCCAGCTTTTGGAATGGT
ATGATAACCTTCCTTATATTCTTAAAGACCATGAGCCATGCTCTGAGTCG
ATTGCGATCACGAGAACCGTCATGAAGTGGCGCTATTACAACCAACGCAT
GCTCTTGTATCGCCCCACCCTGCTCAGCTATGCCATGCGCCGCGTACCAT
ACATTGTGCTCAGGTCTGAAGAAAGGACGGCAATTGAAAGATGTAGGGAG
ATTGCCGAGGCTACCATACAAGATGTAGCCGCCAAGGCACAATTCCATCA
GATGTCAGGCTGGAACGCAGTATGGCTTATCTTCCAGGCTGCTATGGTCC
CTCTTCTAGGCTTGTTTCTCAATGATGGTACGGTTGATGATCCAAGAGCG
ACAGCTGAAGCGTGCCAGGCTCAAGTGGAAACAACAATGCTTGTCCTGGA
GCGCTTGGAACCTTGGAGTCCAGCCGCCAAATCAACGCTCGAGGCTGTTT
CCCGAATATTTGAGGCTGGTAAACGTGGCCCCAGCGTCATCGGGGAAGCC
CACAGCATTAACAGCGGTAGCTGTGTAACGTCTACTGAAGAGACTCTTGG
CGCAGTTCCTGGGGTATCTCCGATGCAAGTCGACTTTGGTCGCGCTATTC
CACACGACAGTGGATTTGTCGACCCATTTGAACCCCAGTTTATCAATGAT
TCTGCTGGACAGTATCTATGGGACTTTCTTAGTTGGAGCGATAGCAACTT
GTTGCAGGGTTTGGCTGATATTGACAATGTCAACAATGGACCACTGTTTC
CCCAGGAGGAGAGAAATGCAAAGTATGGATCCAGCGACACTGCGTTTTTT
GGAGGCCAATTGGGAGATTCAACATTTTTTATCAATTCAGGGCCGTCCTT
CTACTAG back to topCoding sequence (CDS) from alignment at KZ851913.1:290578..293034- >M747DRAFT_314829-T1 ID=M747DRAFT_314829-T1|Name=M747DRAFT_314829-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=7002bp|location=Sequence derived from alignment at KZ851913.1:290578..293034- (Aspergillus niger ATCC 13496)
GGCAATGTGCTCGACCTTCTACCACTTTTGGAAAATGTTCGCTTTTGCAA
GATCGCGACACAGATACAGGAGGTCCTGGCCGTGGCACCGCTGACAAAAC
CTCACGAAATGGCACATCTTGATAGCCAGCTTTTGGAATGGTATGATAAC
CTTCCTTATATTCTTAAAGACCATGAGCCATGCTCTGAGTCGATTGCGAT
CACGAGAACCGTCATGAAGTGGCGCTATTACAACCAACGCATGCTCTTGT
ATCGCCCCACCCTGCTCAGCTATGCCATGCGCCGCGTACCATACATTGTG
CTCAGGTCTGAAGAAAGGACGGCAATTGAAAGATGTAGGGAGATTGCCGA
GGCTACCATACAAGATGTAGCCGCCAAGGCACAATTCCATCAGATGTCAG
GCTGGAACGCAGTATGGCTTATCTTCCAGGCTGCTATGGTCCCTCTTCTA
GGCTTGTTTCTCAATGATGGTACGGTTGATGATCCAAGAGCGACAGCTGA
AGCGTGCCAGGCTCAAGTGGAAACAACAATGCTTGTCCTGGAGCGCTTGG
AACCTTGGAGTCCAGCCGCCAAATCAACGCTCGAGGCTGTTTCCCGAATA
TTTGAGGCTGGTAAACGTGGCCCCAGCGTCATCGGGGAAGCCCACAGCAT
TAACAGCGGTAGCTGTGTAACGTCTACTGAAGAGACTCTTGGCGCAGTTC
CTGGGGTATCTCCGATGCAAGTCGACTTTGGTCGCGCTATTCCACACGAC
AGTGGATTTGTCGACCCATTTGAACCCCAGTTTATCAATGATTCTGCTGG
ACAGTATCTATGGGACTTTCTTAGTTGGAGCGATAGCAACTTGTTGCAGG
GTTTGGCTGATATTGACAATGTCAACAATGGACCACTGTTTCCCCAGGAG
GAGAGAAATGCAAAGTATGGATCCAGCGACACTGCGTTTTTTGGAGGCCA
ATTGGGAGATTCAACATTTTTTATCAATTCAGGGCCGTCCTTCTACTAGG
CATGTGGAGAAACTGTCGACCACACTCGATGAATTCAGGGGAGTGCTTGA
CAAGCTCTTCCCTGGCATTCCAGCGGAGACCCTGGTCAACTTGCCTCGGG
ACAAGCTTCTGGAGCTGACAGGCAAGGGGCCTTCCCAGATGCAGACGCAA
GCGCCACACCCGGCATCCCCAGCAACCTCGGCATCGGTAGAGGCTCACGC
ATCGCCAGCATCCAGCGAAGACGGCAATCTCGAGTCTCTACAGACAATAC
CTGATCACACAACTGATGATCGTGAATTGAAAGGTTCTGAGCTAACGAGT
ACCGTATCCGACGACGTTAACGCTTTATCTCTCTCGGCCAAACAGCCATC
TTCCTATTTGGGTGTCTCTTCCATCCATGCTGTGCTAAAGGTAATAGTAT
GGCTGGAGCCGAGCTCTCTCTCTCATTTGTCTCGCGCACCCGCCACAGGA
GTCCGTCGAGAATCTGTCATGGACATTGCATCTCCAGAGGCCCAGGCCTG
GCAGGTTTTTGGGTCACAGCCCCATCATGGCACGTCCACCCATAGCCCAC
TCCAGGTTCCCGAGACTCAACTGCTCGATGCTTACTTCACCTACTTCCAA
CCTTTTGTTCCAATGCTGGACGAACAATATTTTCGCCAAACGTATCTTTC
TGCGCGCAGGAAAGACAAGCAATGGCTCGCGTTACTTAACATTGTCTTTG
CTTTGGGCAGCATAGCAGCCACCCCGGCCGACGACATGTCCCATCAAGCA
TATTATATGCGGTCTATGAGCCATTTGAATTTGGAAAGCCTTGGATCACC
ACACGTGGAGACTATCCAAGCTCTGGGCCTCATGGGTGGCTATTACCTTC
ACTATAGCAGCCAACCCAACCTCGCGTACTCCATGATGGGAGCCGCGTTG
CGCATGGCGGCTGCTCTGGGGCTACATAAGGAAGTGTCAGATGGCCAGTA
TGGCAATGGCAGGAATAGGCTATCTTCAGTTGACCATAAACGTCGGGTAT
GGTGGTCTCTTTTCTGTCTGGACACGTGGGGTGGCATGACCTTGGGACGG
CCAAGCATGGGTCGGCTGGGTCCAGCAATCACCGTTAAGCTACCACATTA
CAGAGAAACAATGTTTCACACGTTTGAAGGGTTCGAGAACCCAACTCTTC
CGGCTGCTGTGCGCGGACGCAATCAACGTCAACAATCTGTCGGTCGCCGA
GTCACGACGCTCCGCGCCTGCACATCTTGTCGGCACCGAAAAATAAAGTG
TGATGGTGAAAAGCCATGTGAAGCATGCAGATGGTATAAAAAAGCAGACT
TGTGTCAGTACTCTGATCCTCGGCCATCTCGCAGGGCAATGTGCTCGACC
TTCTACCACTTTTGGAAAATGTTCGCTTTTGCAAGATCGCGACACAGATA
CAGGAGGTCCTGGCCGTGGCACCGCTGACAAAACCTCACGAAATGGCACA
TCTTGATAGCCAGCTTTTGGAATGGTATGATAACCTTCCTTATATTCTTA
AAGACCATGAGCCATGCTCTGAGTCGATTGCGATCACGAGAACCGTCATG
AAGTGGCGCTATTACAACCAACGCATGCTCTTGTATCGCCCCACCCTGCT
CAGCTATGCCATGCGCCGCGTACCATACATTGTGCTCAGGTCTGAAGAAA
GGACGGCAATTGAAAGATGTAGGGAGATTGCCGAGGCTACCATACAAGAT
GTAGCCGCCAAGGCACAATTCCATCAGATGTCAGGCTGGAACGCAGTATG
GCTTATCTTCCAGGCTGCTATGGTCCCTCTTCTAGGCTTGTTTCTCAATG
ATGGTACGGTTGATGATCCAAGAGCGACAGCTGAAGCGTGCCAGGCTCAA
GTGGAAACAACAATGCTTGTCCTGGAGCGCTTGGAACCTTGGAGTCCAGC
CGCCAAATCAACGCTCGAGGCTGTTTCCCGAATATTTGAGGCTGGTAAAC
GTGGCCCCAGCGTCATCGGGGAAGCCCACAGCATTAACAGCGGTAGCTGT
GTAACGTCTACTGAAGAGACTCTTGGCGCAGTTCCTGGGGTATCTCCGAT
GCAAGTCGACTTTGGTCGCGCTATTCCACACGACAGTGGATTTGTCGACC
CATTTGAACCCCAGTTTATCAATGATTCTGCTGGACAGTATCTATGGGAC
TTTCTTAGTTGGAGCGATAGCAACTTGTTGCAGGGTTTGGCTGATATTGA
CAATGTCAACAATGGACCACTGTTTCCCCAGGAGGAGAGAAATGCAAAGT
ATGGATCCAGCGACACTGCGTTTTTTGGAGGCCAATTGGGAGATTCAACA
TTTTTTATCAATTCAGGGCCGTCCTTCTACTAGGCATGTGGAGAAACTGT
CGACCACACTCGATGAATTCAGGGGAGTGCTTGACAAGCTCTTCCCTGGC
ATTCCAGCGGAGACCCTGGTCAACTTGCCTCGGGACAAGCTTCTGGAGCT
GACAGGCAAGGGGCCTTCCCAGATGCAGACGCAAGCGCCACACCCGGCAT
CCCCAGCAACCTCGGCATCGGTAGAGGCTCACGCATCGCCAGCATCCAGC
GAAGACGGCAATCTCGAGTCTCTACAGACAATACCTGATCACACAACTGA
TGATCGTGAATTGAAAGGTTCTGAGCTAACGAGTACCGTATCCGACGACG
TTAACGCTTTATCTCTCTCGGCCAAACAGCCATCTTCCTATTTGGGTGTC
TCTTCCATCCATGCTGTGCTAAAGGTAATAGTATGGCTGGAGCCGAGCTC
TCTCTCTCATTTGTCTCGCGCACCCGCCACAGGAGTCCGTCGAGAATCTG
TCATGGACATTGCATCTCCAGAGGCCCAGGCCTGGCAGGTTTTTGGGTCA
CAGCCCCATCATGGCACGTCCACCCATAGCCCACTCCAGGTTCCCGAGAC
TCAACTGCTCGATGCTTACTTCACCTACTTCCAACCTTTTGTTCCAATGC
TGGACGAACAATATTTTCGCCAAACGTATCTTTCTGCGCGCAGGAAAGAC
AAGCAATGGCTCGCGTTACTTAACATTGTCTTTGCTTTGGGCAGCATAGC
AGCCACCCCGGCCGACGACATGTCCCATCAAGCATATTATATGCGGTCTA
TGAGCCATTTGAATTTGGAAAGCCTTGGATCACCACACGTGGAGACTATC
CAAGCTCTGGGCCTCATGGGTGGCTATTACCTTCACTATAGCAGCCAACC
CAACCTCGCGTACTCCATGATGGGAGCCGCGTTGCGCATGGCGGCTGCTC
TGGGGCTACATAAGGAAGTGTCAGATGGCCAGTATGGCAATGGCAGGAAT
AGGCTATCTTCAGTTGACCATAAACGTCGGGTATGGTGGTCTCTTTTCTG
TCTGGACACGTGGGGTGGCATGACCTTGGGACGGCCAAGCATGGGTCGGC
TGGGTCCAGCAATCACCGTTAAGCTACCACATTACAGAGAAACAATGTTT
CACACGTTTGAAGGGTTCGAGAACCCAACTCTTCCGGCTGCTGTGCGCGG
ACGCAATCAACGTCAACAATCTGTCGGTCGCCGAGTCACGACGCTCCGCG
CCTGCACATCTTGTCGGCACCGAAAAATAAAGTGTGATGGTGAAAAGCCA
TGTGAAGCATGCAGATGGTATAAAAAAGCAGACTTGTGTCAGTACTCTGA
TCCTCGGCCATCTCGCAGGGCAATGTGCTCGACCTTCTACCACTTTTGGA
AAATGTTCGCTTTTGCAAGATCGCGACACAGATACAGGAGGTCCTGGCCG
TGGCACCGCTGACAAAACCTCACGAAATGGCACATCTTGATAGCCAGCTT
TTGGAATGGTATGATAACCTTCCTTATATTCTTAAAGACCATGAGCCATG
CTCTGAGTCGATTGCGATCACGAGAACCGTCATGAAGTGGCGCTATTACA
ACCAACGCATGCTCTTGTATCGCCCCACCCTGCTCAGCTATGCCATGCGC
CGCGTACCATACATTGTGCTCAGGTCTGAAGAAAGGACGGCAATTGAAAG
ATGTAGGGAGATTGCCGAGGCTACCATACAAGATGTAGCCGCCAAGGCAC
AATTCCATCAGATGTCAGGCTGGAACGCAGTATGGCTTATCTTCCAGGCT
GCTATGGTCCCTCTTCTAGGCTTGTTTCTCAATGATGGTACGGTTGATGA
TCCAAGAGCGACAGCTGAAGCGTGCCAGGCTCAAGTGGAAACAACAATGC
TTGTCCTGGAGCGCTTGGAACCTTGGAGTCCAGCCGCCAAATCAACGCTC
GAGGCTGTTTCCCGAATATTTGAGGCTGGTAAACGTGGCCCCAGCGTCAT
CGGGGAAGCCCACAGCATTAACAGCGGTAGCTGTGTAACGTCTACTGAAG
AGACTCTTGGCGCAGTTCCTGGGGTATCTCCGATGCAAGTCGACTTTGGT
CGCGCTATTCCACACGACAGTGGATTTGTCGACCCATTTGAACCCCAGTT
TATCAATGATTCTGCTGGACAGTATCTATGGGACTTTCTTAGTTGGAGCG
ATAGCAACTTGTTGCAGGGTTTGGCTGATATTGACAATGTCAACAATGGA
CCACTGTTTCCCCAGGAGGAGAGAAATGCAAAGTATGGATCCAGCGACAC
TGCGTTTTTTGGAGGCCAATTGGGAGATTCAACATTTTTTATCAATTCAG
GGCCGTCCTTCTACTAGGCATGTGGAGAAACTGTCGACCACACTCGATGA
ATTCAGGGGAGTGCTTGACAAGCTCTTCCCTGGCATTCCAGCGGAGACCC
TGGTCAACTTGCCTCGGGACAAGCTTCTGGAGCTGACAGGCAAGGGGCCT
TCCCAGATGCAGACGCAAGCGCCACACCCGGCATCCCCAGCAACCTCGGC
ATCGGTAGAGGCTCACGCATCGCCAGCATCCAGCGAAGACGGCAATCTCG
AGTCTCTACAGACAATACCTGATCACACAACTGATGATCGTGAATTGAAA
GGTTCTGAGCTAACGAGTACCGTATCCGACGACGTTAACGCTTTATCTCT
CTCGGCCAAACAGCCATCTTCCTATTTGGGTGTCTCTTCCATCCATGCTG
TGCTAAAGGTAATAGTATGGCTGGAGCCGAGCTCTCTCTCTCATTTGTCT
CGCGCACCCGCCACAGGAGTCCGTCGAGAATCTGTCATGGACATTGCATC
TCCAGAGGCCCAGGCCTGGCAGGTTTTTGGGTCACAGCCCCATCATGGCA
CGTCCACCCATAGCCCACTCCAGGTTCCCGAGACTCAACTGCTCGATGCT
TACTTCACCTACTTCCAACCTTTTGTTCCAATGCTGGACGAACAATATTT
TCGCCAAACGTATCTTTCTGCGCGCAGGAAAGACAAGCAATGGCTCGCGT
TACTTAACATTGTCTTTGCTTTGGGCAGCATAGCAGCCACCCCGGCCGAC
GACATGTCCCATCAAGCATATTATATGCGGTCTATGAGCCATTTGAATTT
GGAAAGCCTTGGATCACCACACGTGGAGACTATCCAAGCTCTGGGCCTCA
TGGGTGGCTATTACCTTCACTATAGCAGCCAACCCAACCTCGCGTACTCC
ATGATGGGAGCCGCGTTGCGCATGGCGGCTGCTCTGGGGCTACATAAGGA
AGTGTCAGATGGCCAGTATGGCAATGGCAGGAATAGGCTATCTTCAGTTG
ACCATAAACGTCGGGTATGGTGGTCTCTTTTCTGTCTGGACACGTGGGGT
GGCATGACCTTGGGACGGCCAAGCATGGGTCGGCTGGGTCCAGCAATCAC
CGTTAAGCTACCACATTACAGAGAAACAATGTTTCACACGTTTGAAGGGT
TCGAGAACCCAACTCTTCCGGCTGCTGTGCGCGGACGCAATCAACGTCAA
CAATCTGTCGGTCGCCGAGTCACGACGCTCCGCGCCTGCACATCTTGTCG
GCACCGAAAAATAAAGTGTGATGGTGAAAAGCCATGTGAAGCATGCAGAT
GGTATAAAAAAGCAGACTTGTGTCAGTACTCTGATCCTCGGCCATCTCGC
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519131.4 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | C6 transcription factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851913.1 | supercontig | KZ851913.1:290578..293034 - |
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