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M747DRAFT_322301-T1, M747DRAFT_322301-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_322301-T1
Unique NameM747DRAFT_322301-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851909.1:319903..321990-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_322301-T1 ID=M747DRAFT_322301-T1|Name=M747DRAFT_322301-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2088bp|location=Sequence derived from alignment at KZ851909.1:319903..321990- (Aspergillus niger ATCC 13496)
GATGACTGACGCAGTCGTTGTTTACGCAACTGCATCCTACCGCCAGACCT
TAGAGGAGGCATCAATCGCATCCAAGAAGGACCCTTGAAACAAGTCACAA
TGGCTTCTATACCTGGTAAGTATCTTTAGGGCCGTATGCTCCATTCCACT
CTATCTTGTTTCTTCTCCGCTGATCCCATGACGCAGTTGTTGTAAAGCAC
CAGGGCAAACGCTACGAGGTGGAGCTCGATCCTTCCCTGAATGGCGAAAC
GCTCAAATACCAGCTATTTTCTCTCACTGGCGTCGAACCCGAGCGGCAGA
AGATCCTAGTCAAGGGAGGCCAGCTTAAAGATGATACACCTCTGTCCTCC
CTCAACGCCAAACCCGGCCAAACGTTCATGATGATGGGCACTCCGTCGGG
CGGTCAAGGTGCTGGAGACTTGGGTAGACCAAAGGAAGTCGTCAAGTTTT
TGGAAGACATGACGGAAGCTGAAGCTGCCAGGGCGGAGGGTGCAACTCCT
GCAGGTCTGCAGAACCTTGGAAATACTTGCTACCTGAACTCAACGCTACA
GACACTACGGAGCGTTCCCGAACTCCAGGATGCGCTGCTCAAATACCGAC
CTTCTGGGGGCTCTTCTGGAGGTTCTAGCCTTTCGAACCTCAGTAGTCTC
GGTCTTGGCGGCTTGGGAGCTTCTATGGATCTCACGTCCTCTCTGCGGGA
CCTCTTCAAGCAAATGTCGGAGACGCAGGAAGGTTTCCCGCCGCTTATGT
TTCTCAACGCGCTTCGAAATGCTTTCCCCCAATTTGCTCAAAGGGATCGC
AATGGACATGGCTATGCTCAACAGGATGCCGAAGAGGCCTGGTCACAGAT
CGTGAGTCAGCTGCGTAACAAGCTGGTCGTGAAGGAGGGTGAAGGTGACT
CTGCCGCCGAAGTTTCCTTCGTGGATAAGTACATGGCCGGAGGGTTTGAG
TCCACCACCGAATGCGACGAAAAGGCCGCAAAGGAGGCTGGTGAAGAACC
TACTAATAGCTCCGATGTGTTTTACAAGCTTGATTGTCATATTGGTAAAG
AGACTAACCATTTGCACGACGGTATTATGGCTGGTCTCGAGGAGAAGATC
GAAAAGCGGTCCTCTACTCTTGACCGCGATGCCGTATATACCAAACGTTC
ACGCATTGCGCGCTTGCCCAAGTACTTGACGGTGCATTTCGTTCGGTTCT
TCTGGAAGCGCGAAACACAGAAGAAGGCCAAGATTATGCGAAAGGTCACA
TTCCCCGCTGAGCTTGATGCGGTGGACTTCTGCACCGACGAATTGAAAAA
GCAGCTCATTCCTGTGAGAGACAAGGTCCGTGAGATTCGGAAGGAAGAGG
TGGATGTTGAACGTGCTCGTAAGCGTCAAAAGCTCGCTCACCGGAAAGAG
GAGGAAGAAAAGAAAGAGGCCGAGTCCGGGGCAAGCATGGAGCCGATGCA
GAAGAAGAAAGCTGCTGAAGAGCGCAAGGGAGAGTCTAAAGCCGCGGAGA
AAGACGGAGATGAGGCCATGACCGATGTGTTCAAGTCCGATGCAGACTAC
GAAGCTGAGAAGACCGCCTCGATTCTCGCGGCTAAGAAAGAATTGTCTGA
GCTCATTGACCCCAGTCTTGCCTCAGACAGCGGTGTGAACAAGACGGGTC
TCTACGAACTACGCGGAGTGATCACACATCAGGGTGCAAGTGCAGACAGC
GGACATTACACCGCGTACGTGAAAAAGCAGTCCAGCAGTGATGGTGCAAG
CACCGAAGACAAGTGGTGGTGGTTCAACGATGAGAAGGTTACCGAAGTGG
AAGGGGACAAGATTGAGACGCTTGCTGGTGGTGGTAAGCCCCCTGGAACC
ATTGTTACTCGATTCTGATAATCAACGGACTTCTAACCTTCATTTCCAGG
TGAATCCCATTCTGCACTTATTCTCCTCTACCGGGCTGTTGAGGTGCCGA
CGACGAATTAAGCAGGGCCCTCACTTTATCTCACGAGTATCAAGCTAGAA
ACGGTATGCATAGATAATGAGCTTATGGCTGAATGTTAGGAACAAATGTT
TCTGCTCAACAAATTATTGCAAATATGGTTTTGAGTTA
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Coding sequence (CDS) from alignment at KZ851909.1:319903..321990-

>M747DRAFT_322301-T1 ID=M747DRAFT_322301-T1|Name=M747DRAFT_322301-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=5175bp|location=Sequence derived from alignment at KZ851909.1:319903..321990- (Aspergillus niger ATCC 13496)
GTGAATCCCATTCTGCACTTATTCTCCTCTACCGGGCTGTTGAGGTGCCG
ACGACGAATTAATTGTTGTAAAGCACCAGGGCAAACGCTACGAGGTGGAG
CTCGATCCTTCCCTGAATGGCGAAACGCTCAAATACCAGCTATTTTCTCT
CACTGGCGTCGAACCCGAGCGGCAGAAGATCCTAGTCAAGGGAGGCCAGC
TTAAAGATGATACACCTCTGTCCTCCCTCAACGCCAAACCCGGCCAAACG
TTCATGATGATGGGCACTCCGTCGGGCGGTCAAGGTGCTGGAGACTTGGG
TAGACCAAAGGAAGTCGTCAAGTTTTTGGAAGACATGACGGAAGCTGAAG
CTGCCAGGGCGGAGGGTGCAACTCCTGCAGGTCTGCAGAACCTTGGAAAT
ACTTGCTACCTGAACTCAACGCTACAGACACTACGGAGCGTTCCCGAACT
CCAGGATGCGCTGCTCAAATACCGACCTTCTGGGGGCTCTTCTGGAGGTT
CTAGCCTTTCGAACCTCAGTAGTCTCGGTCTTGGCGGCTTGGGAGCTTCT
ATGGATCTCACGTCCTCTCTGCGGGACCTCTTCAAGCAAATGTCGGAGAC
GCAGGAAGGTTTCCCGCCGCTTATGTTTCTCAACGCGCTTCGAAATGCTT
TCCCCCAATTTGCTCAAAGGGATCGCAATGGACATGGCTATGCTCAACAG
GATGCCGAAGAGGCCTGGTCACAGATCGTGAGTCAGCTGCGTAACAAGCT
GGTCGTGAAGGAGGGTGAAGGTGACTCTGCCGCCGAAGTTTCCTTCGTGG
ATAAGTACATGGCCGGAGGGTTTGAGTCCACCACCGAATGCGACGAAAAG
GCCGCAAAGGAGGCTGGTGAAGAACCTACTAATAGCTCCGATGTGTTTTA
CAAGCTTGATTGTCATATTGGTAAAGAGACTAACCATTTGCACGACGGTA
TTATGGCTGGTCTCGAGGAGAAGATCGAAAAGCGGTCCTCTACTCTTGAC
CGCGATGCCGTATATACCAAACGTTCACGCATTGCGCGCTTGCCCAAGTA
CTTGACGGTGCATTTCGTTCGGTTCTTCTGGAAGCGCGAAACACAGAAGA
AGGCCAAGATTATGCGAAAGGTCACATTCCCCGCTGAGCTTGATGCGGTG
GACTTCTGCACCGACGAATTGAAAAAGCAGCTCATTCCTGTGAGAGACAA
GGTCCGTGAGATTCGGAAGGAAGAGGTGGATGTTGAACGTGCTCGTAAGC
GTCAAAAGCTCGCTCACCGGAAAGAGGAGGAAGAAAAGAAAGAGGCCGAG
TCCGGGGCAAGCATGGAGCCGATGCAGAAGAAGAAAGCTGCTGAAGAGCG
CAAGGGAGAGTCTAAAGCCGCGGAGAAAGACGGAGATGAGGCCATGACCG
ATGTGTTCAAGTCCGATGCAGACTACGAAGCTGAGAAGACCGCCTCGATT
CTCGCGGCTAAGAAAGAATTGTCTGAGCTCATTGACCCCAGTCTTGCCTC
AGACAGCGGTGTGAACAAGACGGGTCTCTACGAACTACGCGGAGTGATCA
CACATCAGGGTGCAAGTGCAGACAGCGGACATTACACCGCGTACGTGAAA
AAGCAGTCCAGCAGTGATGGTGCAAGCACCGAAGACAAGTGGTGGTGGTT
CAACGATGAGAAGGTTACCGAAGTGGAAGGGGACAAGATTGAGACGCTTG
CTGGTGGTGATGGCTTCTATACCTGGTGAATCCCATTCTGCACTTATTCT
CCTCTACCGGGCTGTTGAGGTGCCGACGACGAATTAATTGTTGTAAAGCA
CCAGGGCAAACGCTACGAGGTGGAGCTCGATCCTTCCCTGAATGGCGAAA
CGCTCAAATACCAGCTATTTTCTCTCACTGGCGTCGAACCCGAGCGGCAG
AAGATCCTAGTCAAGGGAGGCCAGCTTAAAGATGATACACCTCTGTCCTC
CCTCAACGCCAAACCCGGCCAAACGTTCATGATGATGGGCACTCCGTCGG
GCGGTCAAGGTGCTGGAGACTTGGGTAGACCAAAGGAAGTCGTCAAGTTT
TTGGAAGACATGACGGAAGCTGAAGCTGCCAGGGCGGAGGGTGCAACTCC
TGCAGGTCTGCAGAACCTTGGAAATACTTGCTACCTGAACTCAACGCTAC
AGACACTACGGAGCGTTCCCGAACTCCAGGATGCGCTGCTCAAATACCGA
CCTTCTGGGGGCTCTTCTGGAGGTTCTAGCCTTTCGAACCTCAGTAGTCT
CGGTCTTGGCGGCTTGGGAGCTTCTATGGATCTCACGTCCTCTCTGCGGG
ACCTCTTCAAGCAAATGTCGGAGACGCAGGAAGGTTTCCCGCCGCTTATG
TTTCTCAACGCGCTTCGAAATGCTTTCCCCCAATTTGCTCAAAGGGATCG
CAATGGACATGGCTATGCTCAACAGGATGCCGAAGAGGCCTGGTCACAGA
TCGTGAGTCAGCTGCGTAACAAGCTGGTCGTGAAGGAGGGTGAAGGTGAC
TCTGCCGCCGAAGTTTCCTTCGTGGATAAGTACATGGCCGGAGGGTTTGA
GTCCACCACCGAATGCGACGAAAAGGCCGCAAAGGAGGCTGGTGAAGAAC
CTACTAATAGCTCCGATGTGTTTTACAAGCTTGATTGTCATATTGGTAAA
GAGACTAACCATTTGCACGACGGTATTATGGCTGGTCTCGAGGAGAAGAT
CGAAAAGCGGTCCTCTACTCTTGACCGCGATGCCGTATATACCAAACGTT
CACGCATTGCGCGCTTGCCCAAGTACTTGACGGTGCATTTCGTTCGGTTC
TTCTGGAAGCGCGAAACACAGAAGAAGGCCAAGATTATGCGAAAGGTCAC
ATTCCCCGCTGAGCTTGATGCGGTGGACTTCTGCACCGACGAATTGAAAA
AGCAGCTCATTCCTGTGAGAGACAAGGTCCGTGAGATTCGGAAGGAAGAG
GTGGATGTTGAACGTGCTCGTAAGCGTCAAAAGCTCGCTCACCGGAAAGA
GGAGGAAGAAAAGAAAGAGGCCGAGTCCGGGGCAAGCATGGAGCCGATGC
AGAAGAAGAAAGCTGCTGAAGAGCGCAAGGGAGAGTCTAAAGCCGCGGAG
AAAGACGGAGATGAGGCCATGACCGATGTGTTCAAGTCCGATGCAGACTA
CGAAGCTGAGAAGACCGCCTCGATTCTCGCGGCTAAGAAAGAATTGTCTG
AGCTCATTGACCCCAGTCTTGCCTCAGACAGCGGTGTGAACAAGACGGGT
CTCTACGAACTACGCGGAGTGATCACACATCAGGGTGCAAGTGCAGACAG
CGGACATTACACCGCGTACGTGAAAAAGCAGTCCAGCAGTGATGGTGCAA
GCACCGAAGACAAGTGGTGGTGGTTCAACGATGAGAAGGTTACCGAAGTG
GAAGGGGACAAGATTGAGACGCTTGCTGGTGGTGATGGCTTCTATACCTG
GTGAATCCCATTCTGCACTTATTCTCCTCTACCGGGCTGTTGAGGTGCCG
ACGACGAATTAATTGTTGTAAAGCACCAGGGCAAACGCTACGAGGTGGAG
CTCGATCCTTCCCTGAATGGCGAAACGCTCAAATACCAGCTATTTTCTCT
CACTGGCGTCGAACCCGAGCGGCAGAAGATCCTAGTCAAGGGAGGCCAGC
TTAAAGATGATACACCTCTGTCCTCCCTCAACGCCAAACCCGGCCAAACG
TTCATGATGATGGGCACTCCGTCGGGCGGTCAAGGTGCTGGAGACTTGGG
TAGACCAAAGGAAGTCGTCAAGTTTTTGGAAGACATGACGGAAGCTGAAG
CTGCCAGGGCGGAGGGTGCAACTCCTGCAGGTCTGCAGAACCTTGGAAAT
ACTTGCTACCTGAACTCAACGCTACAGACACTACGGAGCGTTCCCGAACT
CCAGGATGCGCTGCTCAAATACCGACCTTCTGGGGGCTCTTCTGGAGGTT
CTAGCCTTTCGAACCTCAGTAGTCTCGGTCTTGGCGGCTTGGGAGCTTCT
ATGGATCTCACGTCCTCTCTGCGGGACCTCTTCAAGCAAATGTCGGAGAC
GCAGGAAGGTTTCCCGCCGCTTATGTTTCTCAACGCGCTTCGAAATGCTT
TCCCCCAATTTGCTCAAAGGGATCGCAATGGACATGGCTATGCTCAACAG
GATGCCGAAGAGGCCTGGTCACAGATCGTGAGTCAGCTGCGTAACAAGCT
GGTCGTGAAGGAGGGTGAAGGTGACTCTGCCGCCGAAGTTTCCTTCGTGG
ATAAGTACATGGCCGGAGGGTTTGAGTCCACCACCGAATGCGACGAAAAG
GCCGCAAAGGAGGCTGGTGAAGAACCTACTAATAGCTCCGATGTGTTTTA
CAAGCTTGATTGTCATATTGGTAAAGAGACTAACCATTTGCACGACGGTA
TTATGGCTGGTCTCGAGGAGAAGATCGAAAAGCGGTCCTCTACTCTTGAC
CGCGATGCCGTATATACCAAACGTTCACGCATTGCGCGCTTGCCCAAGTA
CTTGACGGTGCATTTCGTTCGGTTCTTCTGGAAGCGCGAAACACAGAAGA
AGGCCAAGATTATGCGAAAGGTCACATTCCCCGCTGAGCTTGATGCGGTG
GACTTCTGCACCGACGAATTGAAAAAGCAGCTCATTCCTGTGAGAGACAA
GGTCCGTGAGATTCGGAAGGAAGAGGTGGATGTTGAACGTGCTCGTAAGC
GTCAAAAGCTCGCTCACCGGAAAGAGGAGGAAGAAAAGAAAGAGGCCGAG
TCCGGGGCAAGCATGGAGCCGATGCAGAAGAAGAAAGCTGCTGAAGAGCG
CAAGGGAGAGTCTAAAGCCGCGGAGAAAGACGGAGATGAGGCCATGACCG
ATGTGTTCAAGTCCGATGCAGACTACGAAGCTGAGAAGACCGCCTCGATT
CTCGCGGCTAAGAAAGAATTGTCTGAGCTCATTGACCCCAGTCTTGCCTC
AGACAGCGGTGTGAACAAGACGGGTCTCTACGAACTACGCGGAGTGATCA
CACATCAGGGTGCAAGTGCAGACAGCGGACATTACACCGCGTACGTGAAA
AAGCAGTCCAGCAGTGATGGTGCAAGCACCGAAGACAAGTGGTGGTGGTT
CAACGATGAGAAGGTTACCGAAGTGGAAGGGGACAAGATTGAGACGCTTG
CTGGTGGTGATGGCTTCTATACCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0016579protein deubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_322301M747DRAFT_322301Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322301-T1M747DRAFT_322301-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322301-T1.cdsM747DRAFT_322301-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322301-T1.utr3p1M747DRAFT_322301-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322301-T1.exon3M747DRAFT_322301-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_322301-T1.exon2M747DRAFT_322301-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_322301-T1.exon1M747DRAFT_322301-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_322301-T1.utr5p1M747DRAFT_322301-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263BGW
NoteMEROPS:MER0004316
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR028889
DBxrefInterPro:IPR018200
DBxrefInterPro:IPR001394
DBxrefInterPro:IPR000626
DBxrefPFAM:PF13423
DBxrefPFAM:PF00443
DBxrefPFAM:PF00240
Productubiquitin carboxyl-terminal hydrolase 6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851909.1supercontigKZ851909.1:319903..321990 -
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