You are here

Home

M747DRAFT_327285-T1, M747DRAFT_327285-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_327285-T1
Unique NameM747DRAFT_327285-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851899.1:572740..574035-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_327285-T1 ID=M747DRAFT_327285-T1|Name=M747DRAFT_327285-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1296bp|location=Sequence derived from alignment at KZ851899.1:572740..574035- (Aspergillus niger ATCC 13496)
CATCCTCGTCGCTACTTATCAATTCATGATTTCTGGCCCTTCTCTTCTTC
CTCCTTCGCCCACAAGCTGCATGTCATTTCCCTCCCGCCGGGACAGCAAT
CACCATTGAATCCTACCCCAGCCCCCAAATACCCCCACTATGAACGTATG
TCCCTATCTATTTGATCTATCCACCTAACCTTTCCCCTTCCCCGCATCCC
CCAAACTCAACCTAATACCGACAACAAACAAACAAACTAACTACCATCCC
CACCAGATCGTCGAATGGGCCTTCGGCAAGCGCATGACGCCCGCCGAGCG
TCTGCGCAAACATCAACGAGCGCTCGACCGAACCCAGCGCGAACTGGACC
GCGAACGAGTCAAGCTTGAGAACCAGGAGAAGAAGCTAGTCCAGGATATC
AAGAAGAGCGCGAAGAATGGGCAGATTGGGGCTTGTAAGATCCAGGCGAA
GGATTTGGTGAGGACGAGGAGGTGCGTTCCCCAGTCATTTGACTCTTATA
TTCAAAGTATGGTGGTTGGTATGCTAATGATGCGGGAACAGATATATCCA
GAAATTCTACCAGATGCGGACACAGCTACAGGCTATTTCGCTGCGGATTC
AGGTACGATCCCATTCTTTCATTTTACACATCATTCATAACTCACAAGGT
AAATGGATAGACGGTACGAAGCAACGAACAAATGATGCAGTCAATGAAAG
GCGCAACGATGCTACTAGGCAGCATGAACCGACAGATGAATCTCCCCGCA
TTGCAACGAATCGCAATGGAGTTCGAACGAGAGAACGATATCATGGATCA
ACGACAGGAAATGATGGATGAGGCGATTGACGAAGCAACGGGACTGGAGG
GCGAGGAGGAAGAAGGCGAGGATATCGTCAAGGAGGTTCTTGATGAGATT
GGTGTGGATCTTAGCCAGGCGGTTCGTTTCCCTCCTCTTCGCGTGGGATT
GGATGAGGTATATGATGCTGACATACTGCTTAGCTGGGAGAAACACCCAC
CGATATACAAAAGACAGCCGTGGGCGAGACGAGAGTTGCGCAAGCGGTTG
GAGCTGGGGGTGGCGGTGGTGCGAATACGAGTGATGATGACTTGCAGGCG
AGATTGGATAGTCTGCGGAGGTGATGTGATTCATACTACTTATGATGGTA
TGAGTATATTTATTTGCTATAACTATATTATCTACTCCTTGCACTTTCTG
TTACGCGGGTTTTATGTTTCAAACGGGGTTAGGGTAATTGGGTTTGCATT
GTTTCCATCCATGAGCAATTTGGCTCGATATCAATGATATATATAG
back to top

Coding sequence (CDS) from alignment at KZ851899.1:572740..574035-

>M747DRAFT_327285-T1 ID=M747DRAFT_327285-T1|Name=M747DRAFT_327285-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3420bp|location=Sequence derived from alignment at KZ851899.1:572740..574035- (Aspergillus niger ATCC 13496)
CTGGGAGAAACACCCACCGATATACAAAAGACAGCCGTGGGCGAGACGAG
AGTTGCGCAAGCGGTTGGAGCTGGGGGTGGCGGTGGTGCGAATACGAGTG
ATGATGACTTGCAGGCGAGATTGGATAGTCTGCGGAGGTGAACGGTACGA
AGCAACGAACAAATGATGCAGTCAATGAAAGGCGCAACGATGCTACTAGG
CAGCATGAACCGACAGATGAATCTCCCCGCATTGCAACGAATCGCAATGG
AGTTCGAACGAGAGAACGATATCATGGATCAACGACAGGAAATGATGGAT
GAGGCGATTGACGAAGCAACGGGACTGGAGGGCGAGGAGGAAGAAGGCGA
GGATATCGTCAAGGAGGTTCTTGATGAGATTGGTGTGGATCTTAGCCAGG
CGATATATCCAGAAATTCTACCAGATGCGGACACAGCTACAGGCTATTTC
GCTGCGGATTCAGATCGTCGAATGGGCCTTCGGCAAGCGCATGACGCCCG
CCGAGCGTCTGCGCAAACATCAACGAGCGCTCGACCGAACCCAGCGCGAA
CTGGACCGCGAACGAGTCAAGCTTGAGAACCAGGAGAAGAAGCTAGTCCA
GGATATCAAGAAGAGCGCGAAGAATGGGCAGATTGGGGCTTGTAAGATCC
AGGCGAAGGATTTGGTGAGGACGAGGAGATGAACCTGGGAGAAACACCCA
CCGATATACAAAAGACAGCCGTGGGCGAGACGAGAGTTGCGCAAGCGGTT
GGAGCTGGGGGTGGCGGTGGTGCGAATACGAGTGATGATGACTTGCAGGC
GAGATTGGATAGTCTGCGGAGGTGAACGGTACGAAGCAACGAACAAATGA
TGCAGTCAATGAAAGGCGCAACGATGCTACTAGGCAGCATGAACCGACAG
ATGAATCTCCCCGCATTGCAACGAATCGCAATGGAGTTCGAACGAGAGAA
CGATATCATGGATCAACGACAGGAAATGATGGATGAGGCGATTGACGAAG
CAACGGGACTGGAGGGCGAGGAGGAAGAAGGCGAGGATATCGTCAAGGAG
GTTCTTGATGAGATTGGTGTGGATCTTAGCCAGGCGATATATCCAGAAAT
TCTACCAGATGCGGACACAGCTACAGGCTATTTCGCTGCGGATTCAGATC
GTCGAATGGGCCTTCGGCAAGCGCATGACGCCCGCCGAGCGTCTGCGCAA
ACATCAACGAGCGCTCGACCGAACCCAGCGCGAACTGGACCGCGAACGAG
TCAAGCTTGAGAACCAGGAGAAGAAGCTAGTCCAGGATATCAAGAAGAGC
GCGAAGAATGGGCAGATTGGGGCTTGTAAGATCCAGGCGAAGGATTTGGT
GAGGACGAGGAGATGAACCTGGGAGAAACACCCACCGATATACAAAAGAC
AGCCGTGGGCGAGACGAGAGTTGCGCAAGCGGTTGGAGCTGGGGGTGGCG
GTGGTGCGAATACGAGTGATGATGACTTGCAGGCGAGATTGGATAGTCTG
CGGAGGTGAACGGTACGAAGCAACGAACAAATGATGCAGTCAATGAAAGG
CGCAACGATGCTACTAGGCAGCATGAACCGACAGATGAATCTCCCCGCAT
TGCAACGAATCGCAATGGAGTTCGAACGAGAGAACGATATCATGGATCAA
CGACAGGAAATGATGGATGAGGCGATTGACGAAGCAACGGGACTGGAGGG
CGAGGAGGAAGAAGGCGAGGATATCGTCAAGGAGGTTCTTGATGAGATTG
GTGTGGATCTTAGCCAGGCGATATATCCAGAAATTCTACCAGATGCGGAC
ACAGCTACAGGCTATTTCGCTGCGGATTCAGATCGTCGAATGGGCCTTCG
GCAAGCGCATGACGCCCGCCGAGCGTCTGCGCAAACATCAACGAGCGCTC
GACCGAACCCAGCGCGAACTGGACCGCGAACGAGTCAAGCTTGAGAACCA
GGAGAAGAAGCTAGTCCAGGATATCAAGAAGAGCGCGAAGAATGGGCAGA
TTGGGGCTTGTAAGATCCAGGCGAAGGATTTGGTGAGGACGAGGAGATGA
ACCTGGGAGAAACACCCACCGATATACAAAAGACAGCCGTGGGCGAGACG
AGAGTTGCGCAAGCGGTTGGAGCTGGGGGTGGCGGTGGTGCGAATACGAG
TGATGATGACTTGCAGGCGAGATTGGATAGTCTGCGGAGGTGAACGGTAC
GAAGCAACGAACAAATGATGCAGTCAATGAAAGGCGCAACGATGCTACTA
GGCAGCATGAACCGACAGATGAATCTCCCCGCATTGCAACGAATCGCAAT
GGAGTTCGAACGAGAGAACGATATCATGGATCAACGACAGGAAATGATGG
ATGAGGCGATTGACGAAGCAACGGGACTGGAGGGCGAGGAGGAAGAAGGC
GAGGATATCGTCAAGGAGGTTCTTGATGAGATTGGTGTGGATCTTAGCCA
GGCGATATATCCAGAAATTCTACCAGATGCGGACACAGCTACAGGCTATT
TCGCTGCGGATTCAGATCGTCGAATGGGCCTTCGGCAAGCGCATGACGCC
CGCCGAGCGTCTGCGCAAACATCAACGAGCGCTCGACCGAACCCAGCGCG
AACTGGACCGCGAACGAGTCAAGCTTGAGAACCAGGAGAAGAAGCTAGTC
CAGGATATCAAGAAGAGCGCGAAGAATGGGCAGATTGGGGCTTGTAAGAT
CCAGGCGAAGGATTTGGTGAGGACGAGGAGATGAACCTGGGAGAAACACC
CACCGATATACAAAAGACAGCCGTGGGCGAGACGAGAGTTGCGCAAGCGG
TTGGAGCTGGGGGTGGCGGTGGTGCGAATACGAGTGATGATGACTTGCAG
GCGAGATTGGATAGTCTGCGGAGGTGAACGGTACGAAGCAACGAACAAAT
GATGCAGTCAATGAAAGGCGCAACGATGCTACTAGGCAGCATGAACCGAC
AGATGAATCTCCCCGCATTGCAACGAATCGCAATGGAGTTCGAACGAGAG
AACGATATCATGGATCAACGACAGGAAATGATGGATGAGGCGATTGACGA
AGCAACGGGACTGGAGGGCGAGGAGGAAGAAGGCGAGGATATCGTCAAGG
AGGTTCTTGATGAGATTGGTGTGGATCTTAGCCAGGCGATATATCCAGAA
ATTCTACCAGATGCGGACACAGCTACAGGCTATTTCGCTGCGGATTCAGA
TCGTCGAATGGGCCTTCGGCAAGCGCATGACGCCCGCCGAGCGTCTGCGC
AAACATCAACGAGCGCTCGACCGAACCCAGCGCGAACTGGACCGCGAACG
AGTCAAGCTTGAGAACCAGGAGAAGAAGCTAGTCCAGGATATCAAGAAGA
GCGCGAAGAATGGGCAGATTGGGGCTTGTAAGATCCAGGCGAAGGATTTG
GTGAGGACGAGGAGATGAAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_327285M747DRAFT_327285Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327285-T1M747DRAFT_327285-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327285-T1.cdsM747DRAFT_327285-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327285-T1.utr3p1M747DRAFT_327285-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327285-T1.exon5M747DRAFT_327285-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_327285-T1.exon4M747DRAFT_327285-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_327285-T1.exon3M747DRAFT_327285-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_327285-T1.exon2M747DRAFT_327285-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_327285-T1.exon1M747DRAFT_327285-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327285-T1.utr5p1M747DRAFT_327285-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8518991.2
NoteantiSMASH:Cluster_8518991.1
NoteBUSCO:EOG09264T0J
DBxrefInterPro:IPR005024
DBxrefPFAM:PF03357
ProductSnf7-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851899.1supercontigKZ851899.1:572740..574035 -
Powered by Drupal