You are here

Home

M747DRAFT_327740-T1, M747DRAFT_327740-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_327740-T1
Unique NameM747DRAFT_327740-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851900.1:461489..462932+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_327740-T1 ID=M747DRAFT_327740-T1|Name=M747DRAFT_327740-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1444bp|location=Sequence derived from alignment at KZ851900.1:461489..462932+ (Aspergillus niger ATCC 13496)
CACGGCCGAGGTGTTATGTCTTCTACCTACTTTGCGTCACTTTCTTATAT
AAGTTCTTAGCACACGCGCTTCTCCTTTTCTTCTTCTCATCACTTCCTTG
ATACTTTTTTGGTTCCTTGGCCAGCTATCAGTCATGACCCCCCTCGACCG
CCCTCTGGCCCGCCCATGGTATGAAGACTATTCGGAGGAAGAGATTGAAC
GCGATGAAAACGATGAAATAATTATACCCCGGCACAGAGTCCTTGACTTG
TATGAGCTCCTCGGTGTCGATAACAAAGCGACTCAAGACCAGATCAGAGC
TGCCTATAAGAAGAAGGCGCTAAAGCATCATCCTGGTGCGTATATACTTT
ACTATACTCTTATCTATCTATCACTTCGGTGGAATGTACAGTCTAACCAC
CAGCACCAGACAAGGCACCCCCGAGCAAAAAAGAAGAAGCAAACACCAAA
TTCCAACAGATCGCCTATGCCTACGCCGTCCTTTCCGATGAACGTCGCCG
CGAGATATTCGATCGCACCGGTAGCACAGAGGAAGCCTTGCAAGAAGATG
ATGGATTCGACTGGATGGAGTTCTATCGAGAGCAGTTCGCGACCGCCATC
GACGTCGATGCGATCGACAAGCTCAAGCAGGAATACCAGGGGTCCGAGGA
AGAGGTCAACGATATACTGCAGGCCTATGAACTTCACCGGGGCGATATGG
ATAGAATCTACGAGTCGGTGATGCTGTGTAATGTCATTGATGATGATGAG
CGATTTCGTGTTATCATTGACTCGGCTATTGCGGATGGAAGGGCCCAGGA
GTACAAGAAATATACAGAGGAGCCGGTCAAGAAGCGTCAAGCCAGATTGA
AGCGGGCACTGAAGGAAGCGAAGGAGGCGGAACAATTGGGCAAGGAGATC
GAGGAGAACAAGTCTAAGACGGGTAGGAAGAACCAAGGGGGGAGGAAGAA
GAAGGGTGGCCCCGAGGACGTGGGTGACTTGGCTGCGATGATTAAACAGC
GAAACCTCTCCCGTCTTGACGTCCTCTGTCATCAACTGGAGGAGAAGTAT
GACGTGGACAGTAAGCTTAACCCTCTGGAGCCGAGGAGGAAGCGGAGGTC
GAGTCCTCCTGAGGAGGCCTTCAAGGCTATGGCTGCGCGTGGGGAGAAAA
AGAAGAAGCAGAAGAGGACCAAGGGGTGAGGTGTGTTATCCTTGGGTGGA
TTGTCTCTTTATGCGTTATTTTTTTTTTATCACTACTACTTATCTTTGAG
GTTGGGAGTTCAGGTCATGTAGGGACAGAGCCCTTTGCAGCATGGTACAT
TGAGTGATTTGGCAGTCAGGCATGGGAATGCATTGTTTTGTTTTTTTGTT
TTTCATTCAATTCCTTTCTCACATTGGGTTTTATTTCTGAATTCTGCACT
TTGCTACCATTGAGTGCCCAATACACAGTAGTAGTGCTGGCAGT
back to top

Coding sequence (CDS) from alignment at KZ851900.1:461489..462932+

>M747DRAFT_327740-T1 ID=M747DRAFT_327740-T1|Name=M747DRAFT_327740-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1944bp|location=Sequence derived from alignment at KZ851900.1:461489..462932+ (Aspergillus niger ATCC 13496)
ATGACCCCCCTCGACCGCCCTCTGGCCCGCCCATGGTATGAAGACTATTC
GGAGGAAGAGATTGAACGCGATGAAAACGATGAAATAATTATACCCCGGC
ACAGAGTCCTTGACTTGTATGAGCTCCTCGGTGTCGATAACAAAGCGACT
CAAGACCAGATCAGAGCTGCCTATAAGAAGAAGGCGCTAAAGCATCATCC
TGACAAGGCACCCCCGAGCAAAAAAGAAGAAGCAAACACCAAATTCCAAC
AGATCGCCTATGCCTACGCCGTCCTTTCCGATGAACGTCGCCGCGAGATA
TTCGATCGCACCGGTAGCACAGAGGAAGCCTTGCAAGAAGATGATGGATT
CGACTGGATGGAGTTCTATCGAGAGCAGTTCGCGACCGCCATCGACGTCG
ATGCGATCGACAAGCTCAAGCAGGAATACCAGGGGTCCGAGGAAGAGGTC
AACGATATACTGCAGGCCTATGAACTTCACCGGGGCGATATGGATAGAAT
CTACGAGTCGGTGATGCTGTGTAATGTCATTGATGATGATGAGCGATTTC
GTGTTATCATTGACTCGGCTATTGCGGATGGAAGGGCCCAGGAGTACAAG
AAATATACAGAGGAGCCGGTCAAGAAGCGTCAAGCCAGATTGAAGCGGGC
ACTGAAGGAAGCGAAGGAGGCGGAACAATTGGGCAAGGAGATCGAGGAGA
ACAAGTCTAAGACGGGTAGGAAGAACCAAGGGGGGAGGAAGAAGAAGGGT
GGCCCCGAGGACGTGGGTGACTTGGCTGCGATGATTAAACAGCGAAACCT
CTCCCGTCTTGACGTCCTCTGTCATCAACTGGAGGAGAAGTATGACGTGG
ACAGTAAGCTTAACCCTCTGGAGCCGAGGAGGAAGCGGAGGTCGAGTCCT
CCTGAGGAGGCCTTCAAGGCTATGGCTGCGCGTGGGGAGAAAAAGAAGAA
GCAGAAGAGGACCAAGGGGTGAATGACCCCCCTCGACCGCCCTCTGGCCC
GCCCATGGTATGAAGACTATTCGGAGGAAGAGATTGAACGCGATGAAAAC
GATGAAATAATTATACCCCGGCACAGAGTCCTTGACTTGTATGAGCTCCT
CGGTGTCGATAACAAAGCGACTCAAGACCAGATCAGAGCTGCCTATAAGA
AGAAGGCGCTAAAGCATCATCCTGACAAGGCACCCCCGAGCAAAAAAGAA
GAAGCAAACACCAAATTCCAACAGATCGCCTATGCCTACGCCGTCCTTTC
CGATGAACGTCGCCGCGAGATATTCGATCGCACCGGTAGCACAGAGGAAG
CCTTGCAAGAAGATGATGGATTCGACTGGATGGAGTTCTATCGAGAGCAG
TTCGCGACCGCCATCGACGTCGATGCGATCGACAAGCTCAAGCAGGAATA
CCAGGGGTCCGAGGAAGAGGTCAACGATATACTGCAGGCCTATGAACTTC
ACCGGGGCGATATGGATAGAATCTACGAGTCGGTGATGCTGTGTAATGTC
ATTGATGATGATGAGCGATTTCGTGTTATCATTGACTCGGCTATTGCGGA
TGGAAGGGCCCAGGAGTACAAGAAATATACAGAGGAGCCGGTCAAGAAGC
GTCAAGCCAGATTGAAGCGGGCACTGAAGGAAGCGAAGGAGGCGGAACAA
TTGGGCAAGGAGATCGAGGAGAACAAGTCTAAGACGGGTAGGAAGAACCA
AGGGGGGAGGAAGAAGAAGGGTGGCCCCGAGGACGTGGGTGACTTGGCTG
CGATGATTAAACAGCGAAACCTCTCCCGTCTTGACGTCCTCTGTCATCAA
CTGGAGGAGAAGTATGACGTGGACAGTAAGCTTAACCCTCTGGAGCCGAG
GAGGAAGCGGAGGTCGAGTCCTCCTGAGGAGGCCTTCAAGGCTATGGCTG
CGCGTGGGGAGAAAAAGAAGAAGCAGAAGAGGACCAAGGGGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_327740M747DRAFT_327740Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327740-T1.utr5p1M747DRAFT_327740-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327740-T1.exon1M747DRAFT_327740-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_327740-T1.exon2M747DRAFT_327740-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327740-T1.cdsM747DRAFT_327740-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327740-T1.utr3p1M747DRAFT_327740-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_327740-T1M747DRAFT_327740-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018253
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR001623
DBxrefPFAM:PF00226
ProductDnaJ-domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851900.1supercontigKZ851900.1:461489..462932 +
Powered by Drupal