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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851900.1:1023407..1024786- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_327891-T1 ID=M747DRAFT_327891-T1|Name=M747DRAFT_327891-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1380bp|location=Sequence derived from alignment at KZ851900.1:1023407..1024786- (Aspergillus niger ATCC 13496)
TTTCTCCATGTTTTTACATGTCACACGGAGGGCTTTCTAGATCCTCTATG
TTCTCTCAGATTGTGACAGCAGCAAAGGGGTTATTTTCTCGACAGGACTC
CGACGAATCTTCCCTCAAAAATCTGCGCCCTACAGCTACTATCACCACCT
CCGGCGCCCCATCTGGAATCAAAAGCAGCCCCAACATACCCAAAATGGTC
ACAGCAACAAGACAGCGGAAATTCCCCGCTGAGCGACAACAATCCTCGAC
AGAGCCCGAAGTCAATGGATCGAATGGAAAGCGCAAGTCCGAACCCGTGG
GCGCTGAACCCACTGAGACTCAGAGCAAGAACAAGCGGCGGAAGAGAAGC
AGTCTAGAGGCGACGACACAAGAATCGGAGAGCAAACCTTCGAGTAACAA
GAAGTCGAAGAAGATGACGGAACCGACTGAGGAGCCTGAGGAACAGCAAG
AGGAGGAAAAGAAACCTTCAGCAGCGCCGGCGGCGAAGAAGCACTTCCGC
TTTGATAGCGAGGAGCCGGAAATCCCGGAGGTTGCGGCTGTTGAGGATAC
CACGGAGGCGCAACAGGATCAGGATGATGAGAGCAGTGATGATGATGAGG
CCCCAGAGACGGTCGACAACTCTGCACAGCTGTCGAAGATGAGGATGGAA
GCTAAGAAGCAGGAACGGGCTAGGCAAATGTGAGTGATGCGCGCGATTTC
AGCCTTGGTGCTGTTTCTGGATACGATTCTAACGTTTTCTACAGAGAGGA
GCAATTGAAGCGGGACAAACGGAAACAGTTGGATGAGTTGCGCAAATCCC
AGGCGAAGTTGGCGAAGAAAAAGGAAGCAAAGGCCGAAGATCTGTTGTCG
GAAAGCACAGAGACCCTCCAAGGAACTACTACGCAAGATGCACGACGCTC
GGCCCTCCCTGCTCTTCTTCCCGATGATATCCTCAATGCGGCCCCCGATG
TCCGGCCCCCGACACCTCCCGCGGAAGAGAGGACTATCATGCAGAAGAAG
CCCAACAAGCTACGATTCTTGGACAAGAAGGAGAAGCCGCCGAAGGATGC
GCGGGTGGGAGATGTTACTATCCGGGTGTTGGATGATGGTGTATCCAGGA
AGCCCTCAAAGACGGTTCTGCCGCCTAAGGCCTCAAAAACCGGGCGCAAT
GCCAAGCAGAATTGGCTGAACAAATCCCGCAACACAGGCGCTTTGAATGG
GTTGAGAAGGACGACTGGCGGTTCCTCGGGATTCGTGCGCAAATAGCAGG
TCTTGGGCGCTCTTTTACGCTTTCCCGTCTCGAGAATCAATCAGTCAAAA
TATTAATAGAGAATGTTGTGGATCCAACCATGGGCGTAGTGTTACGATGT
GCATAACATAGCAACTATTTACTTCTTTAG back to topCoding sequence (CDS) from alignment at KZ851900.1:1023407..1024786- >M747DRAFT_327891-T1 ID=M747DRAFT_327891-T1|Name=M747DRAFT_327891-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2328bp|location=Sequence derived from alignment at KZ851900.1:1023407..1024786- (Aspergillus niger ATCC 13496)
AGAGGAGCAATTGAAGCGGGACAAACGGAAACAGTTGGATGAGTTGCGCA
AATCCCAGGCGAAGTTGGCGAAGAAAAAGGAAGCAAAGGCCGAAGATCTG
TTGTCGGAAAGCACAGAGACCCTCCAAGGAACTACTACGCAAGATGCACG
ACGCTCGGCCCTCCCTGCTCTTCTTCCCGATGATATCCTCAATGCGGCCC
CCGATGTCCGGCCCCCGACACCTCCCGCGGAAGAGAGGACTATCATGCAG
AAGAAGCCCAACAAGCTACGATTCTTGGACAAGAAGGAGAAGCCGCCGAA
GGATGCGCGGGTGGGAGATGTTACTATCCGGGTGTTGGATGATGGTGTAT
CCAGGAAGCCCTCAAAGACGGTTCTGCCGCCTAAGGCCTCAAAAACCGGG
CGCAATGCCAAGCAGAATTGGCTGAACAAATCCCGCAACACAGGCGCTTT
GAATGGGTTGAGAAGGACGACTGGCGGTTCCTCGGGATTCGTGCGCAAAT
AGATGTCACACGGAGGGCTTTCTAGATCCTCTATGTTCTCTCAGATTGTG
ACAGCAGCAAAGGGGTTATTTTCTCGACAGGACTCCGACGAATCTTCCCT
CAAAAATCTGCGCCCTACAGCTACTATCACCACCTCCGGCGCCCCATCTG
GAATCAAAAGCAGCCCCAACATACCCAAAATGGTCACAGCAACAAGACAG
CGGAAATTCCCCGCTGAGCGACAACAATCCTCGACAGAGCCCGAAGTCAA
TGGATCGAATGGAAAGCGCAAGTCCGAACCCGTGGGCGCTGAACCCACTG
AGACTCAGAGCAAGAACAAGCGGCGGAAGAGAAGCAGTCTAGAGGCGACG
ACACAAGAATCGGAGAGCAAACCTTCGAGTAACAAGAAGTCGAAGAAGAT
GACGGAACCGACTGAGGAGCCTGAGGAACAGCAAGAGGAGGAAAAGAAAC
CTTCAGCAGCGCCGGCGGCGAAGAAGCACTTCCGCTTTGATAGCGAGGAG
CCGGAAATCCCGGAGGTTGCGGCTGTTGAGGATACCACGGAGGCGCAACA
GGATCAGGATGATGAGAGCAGTGATGATGATGAGGCCCCAGAGACGGTCG
ACAACTCTGCACAGCTGTCGAAGATGAGGATGGAAGCTAAGAAGCAGGAA
CGGGCTAGGCAAATAGAGGAGCAATTGAAGCGGGACAAACGGAAACAGTT
GGATGAGTTGCGCAAATCCCAGGCGAAGTTGGCGAAGAAAAAGGAAGCAA
AGGCCGAAGATCTGTTGTCGGAAAGCACAGAGACCCTCCAAGGAACTACT
ACGCAAGATGCACGACGCTCGGCCCTCCCTGCTCTTCTTCCCGATGATAT
CCTCAATGCGGCCCCCGATGTCCGGCCCCCGACACCTCCCGCGGAAGAGA
GGACTATCATGCAGAAGAAGCCCAACAAGCTACGATTCTTGGACAAGAAG
GAGAAGCCGCCGAAGGATGCGCGGGTGGGAGATGTTACTATCCGGGTGTT
GGATGATGGTGTATCCAGGAAGCCCTCAAAGACGGTTCTGCCGCCTAAGG
CCTCAAAAACCGGGCGCAATGCCAAGCAGAATTGGCTGAACAAATCCCGC
AACACAGGCGCTTTGAATGGGTTGAGAAGGACGACTGGCGGTTCCTCGGG
ATTCGTGCGCAAATAGATGTCACACGGAGGGCTTTCTAGATCCTCTATGT
TCTCTCAGATTGTGACAGCAGCAAAGGGGTTATTTTCTCGACAGGACTCC
GACGAATCTTCCCTCAAAAATCTGCGCCCTACAGCTACTATCACCACCTC
CGGCGCCCCATCTGGAATCAAAAGCAGCCCCAACATACCCAAAATGGTCA
CAGCAACAAGACAGCGGAAATTCCCCGCTGAGCGACAACAATCCTCGACA
GAGCCCGAAGTCAATGGATCGAATGGAAAGCGCAAGTCCGAACCCGTGGG
CGCTGAACCCACTGAGACTCAGAGCAAGAACAAGCGGCGGAAGAGAAGCA
GTCTAGAGGCGACGACACAAGAATCGGAGAGCAAACCTTCGAGTAACAAG
AAGTCGAAGAAGATGACGGAACCGACTGAGGAGCCTGAGGAACAGCAAGA
GGAGGAAAAGAAACCTTCAGCAGCGCCGGCGGCGAAGAAGCACTTCCGCT
TTGATAGCGAGGAGCCGGAAATCCCGGAGGTTGCGGCTGTTGAGGATACC
ACGGAGGCGCAACAGGATCAGGATGATGAGAGCAGTGATGATGATGAGGC
CCCAGAGACGGTCGACAACTCTGCACAGCTGTCGAAGATGAGGATGGAAG
CTAAGAAGCAGGAACGGGCTAGGCAAAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030515 | snoRNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006364 | rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013268 |
| DBxref | PFAM:PF08297 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851900.1 | supercontig | KZ851900.1:1023407..1024786 - |
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