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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851901.1:470318..471139+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_328171-T1 ID=M747DRAFT_328171-T1|Name=M747DRAFT_328171-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=822bp|location=Sequence derived from alignment at KZ851901.1:470318..471139+ (Aspergillus niger ATCC 13496)
CTTCAATCGCGAACTATAGTTCCTGTCTATCCACCAGTCGCAGGTAGGTC
TAATTCATCTATCCTTCTTGAACTATAATCACAAGCGCATACAGCAAACT
AACCCAATCTGAATTTCTAGACTACATTCCCCTACACCTCCAATTCCGCC
TCAACTCTACCATCTACAACCACAACCATGACTTCCACAATCCCACCAGC
ACCACCATCCCAACAACAACCACTCAATCCAACAACGACTGAAACAACAA
CACCCCTTCCCCCCTCCGCCCTCACAACCCTCCTCTCCACCACAACCACA
ACACCACCCACCCCCCTCTCCGCAAACACAATCCAAATCCTCCACAACCT
CCAACACCAACACCTCTGGACCTCCCTGCGCGTCCACGACCTCCACCTCC
CCAGCAAATCCACCACCGAACCTGAACAACCCCTCTACCTCATCTCCGGC
ATCCCCCCGCACCACCTCTACATCCACCCGGACGAGCAGCTGTTTATGCT
GGAGCGCGGACTGCGCGAAGACGACGTCGAGCTCGAGCGCATGTTCGTCC
TGCCCACGGTGCAGGGCGAGTCATGGACGCTTCGCAAGTTGGCGGGGGTG
TTTGATTCGTTGCCCGAGGGTAGCGAGGAAGTACTGGAAGGAGGGGGTGA
GAAGGCGGAGAAGTTGAGGGAATATTATGAGTATCGGGGGAAGGCGAGGG
CTACGAAGGAGTGGGGTGGGAAGAGGTTGTTGTTGGCTATGGTGGATAGG
AGGATGGGGGGTGATGGGACAGTGGTGTATTATGTTGTGCAGGATGGTGC
GGTGAAGCCGAGACAGAATTAA back to topCoding sequence (CDS) from alignment at KZ851901.1:470318..471139+ >M747DRAFT_328171-T1 ID=M747DRAFT_328171-T1|Name=M747DRAFT_328171-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=645bp|location=Sequence derived from alignment at KZ851901.1:470318..471139+ (Aspergillus niger ATCC 13496)
ATGACTTCCACAATCCCACCAGCACCACCATCCCAACAACAACCACTCAA
TCCAACAACGACTGAAACAACAACACCCCTTCCCCCCTCCGCCCTCACAA
CCCTCCTCTCCACCACAACCACAACACCACCCACCCCCCTCTCCGCAAAC
ACAATCCAAATCCTCCACAACCTCCAACACCAACACCTCTGGACCTCCCT
GCGCGTCCACGACCTCCACCTCCCCAGCAAATCCACCACCGAACCTGAAC
AACCCCTCTACCTCATCTCCGGCATCCCCCCGCACCACCTCTACATCCAC
CCGGACGAGCAGCTGTTTATGCTGGAGCGCGGACTGCGCGAAGACGACGT
CGAGCTCGAGCGCATGTTCGTCCTGCCCACGGTGCAGGGCGAGTCATGGA
CGCTTCGCAAGTTGGCGGGGGTGTTTGATTCGTTGCCCGAGGGTAGCGAG
GAAGTACTGGAAGGAGGGGGTGAGAAGGCGGAGAAGTTGAGGGAATATTA
TGAGTATCGGGGGAAGGCGAGGGCTACGAAGGAGTGGGGTGGGAAGAGGT
TGTTGTTGGCTATGGTGGATAGGAGGATGGGGGGTGATGGGACAGTGGTG
TATTATGTTGTGCAGGATGGTGCGGTGAAGCCGAGACAGAATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000213 | tRNA-intron endonuclease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036167 |
| DBxref | InterPro:IPR018593 |
| DBxref | PFAM:PF09631 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851901.1 | supercontig | KZ851901.1:470318..471139 + |
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