You are here

M747DRAFT_330278-T1, M747DRAFT_330278-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_330278-T1
Unique NameM747DRAFT_330278-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851909.1:201120..202953+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_330278-T1 ID=M747DRAFT_330278-T1|Name=M747DRAFT_330278-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1834bp|location=Sequence derived from alignment at KZ851909.1:201120..202953+ (Aspergillus niger ATCC 13496)
ATGTGTTGAATACTAAACTAGACTACGCCCCTCCGACCGTCAGCTGAAGC ATTGGCCTGCCACTAACGTAAGACTCAAAACTCTCAGCCTTCTCCATCTA CTCCATTCCTCATCTGTCTTTACACTTCTTCAGTCGTCGTCCTGTCCGGC CCAGGCTATGCATCCTTCTCGGCTATTTACAGGACCATTTCTTGTCCTAC CCCCCTACATGCAACATGTGAGATGTCACGATTCACGGAGTTTCCATTCA ACGAAATGATCTCCGGCACCGAGGGCGGCGCCCGTGCCCCCTTCGAGACC GGTCGTCCTATCTTCTCCCCACTGCGACTTTAGTGGTTCTGCGCATCTGC AGTCTACGTGGACTTGATCGCACTTACTGCTATTCATATTCAATGGCATC TATTGTCAATTTCATCTCGAATGTGCTCCTCCGCCCTGTGGAGTCCTACT GCAGCTTCGGTCCGACGGTGAGTGAAATCACCTTTGGACAGCTGGGGTAC TCCTTCAATCCCGAACGCGACATCAATGATCTGTCAGGGAAGGTTGTCTT CGTCACTGGAGGTATGTCATCTCTATACCTTGGGCTGTCTATCTCAGTGC GCTAACTTCTCCGCTTGTTTCGTAGGAAATGCCGGTCTAGGAAAAGAAAC CATCCTCCAACTCGCCCATCACCGCCCATCTCGCATCTACCTTGGTGCAC GGAATGCGATCAAAGCCGAAGATGCCATCGCTTCAATCCGGGAGCAGGTT CCATCCGCCGATATCAGACACATATCCCTCGACCTGTCCTCATTCAAGTC GATCCGTGCCGCTGCCGAGCAGTTCACGTCAGAATGCGATCGCCTGGACC TCTTGATCCTTAACGCGGGAATCATGAACTGCCCGCCTGCCCTGACAGAG GAAGGATTCGAGATACAATTCGGGACGAATCATATCGGGCATTTCCTACT TACCCAGCTACTACTACCCACACTGCAACGAACGGTTGATCTTTCCAGGG ATGTTCGTGTAGTAACGTTGTCCTCTGCCGCGAATGTCGCCGCGCCTCCC TTCGAAGTCATGACTTCTACGCCGGCTTTACTAGCGGATCACACATTGGC CCGATACTGTTCATCAAAGGCAGCGAATATCCTTTTTGCGTCGGAGCTGG CTCGTCGCCATCCGGAGATTCTGTCTGTCGCGGTACATCCCGGCTCCGTC GTGAGCGACCTATGGGATCATTCGATCAAGACGAGTGTCGTCGCCAAATA CAGTATCGGCGCTCTTCTGGCGTTCAGTCGGGGCATACGGAGCGGAGCAC TCAACCAACTCTGGGCCGCAGGGGCGAGAAGAGAATTGCTGACCAACGGA GCTTATTATGTTCCCATTGGGGTACACGCTACGGGCAACCGGTACGCAAG GGACGCCGATATGGCACGGCGACTGTGGGAGTGGACTGAGCAGCAGATTG CGGACAAATCGTAACCTTATCCGGTTCCAATGATGTTTTGGTCTTCCCCC ACCTCAGCCCCTGTATCTAGAGATCGACGAATTAGCCCAGGATATGCGTG GCTATGTCTTGGAAACAACACTGTGACTGTCATAATAAAGCAAATAATCG AAACCTATGGAATAACATGATGCGATACTGGACGTTGCTTCAGGGTCCGG ATCGCGGGGTTGATGACGGGTAAACTCGCAGATTACCGGATTCGGTATGA GATGCCGGAAAGCGGGTGGTGAGCGTCAATCCCGGCGAGACTCATTGGCG GCCACAAACTGTCCCAAGGTGCCAAACAACCTCTCAAGAAAAAGGGACCA ACCTACTCCCCATAGAAAAAAATATTCCTAGTTC
back to top

Coding sequence (CDS) from alignment at KZ851909.1:201120..202953+

>M747DRAFT_330278-T1 ID=M747DRAFT_330278-T1|Name=M747DRAFT_330278-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2016bp|location=Sequence derived from alignment at KZ851909.1:201120..202953+ (Aspergillus niger ATCC 13496)
ATGGCATCTATTGTCAATTTCATCTCGAATGTGCTCCTCCGCCCTGTGGA
GTCCTACTGCAGCTTCGGTCCGACGGTGAGTGAAATCACCTTTGGACAGC
TGGGGTACTCCTTCAATCCCGAACGCGACATCAATGATCTGTCAGGGAAG
GTTGTCTTCGTCACTGGAGGAAATGCCGGTCTAGGAAAAGAAACCATCCT
CCAACTCGCCCATCACCGCCCATCTCGCATCTACCTTGGTGCACGGAATG
CGATCAAAGCCGAAGATGCCATCGCTTCAATCCGGGAGCAGGTTCCATCC
GCCGATATCAGACACATATCCCTCGACCTGTCCTCATTCAAGTCGATCCG
TGCCGCTGCCGAGCAGTTCACGTCAGAATGCGATCGCCTGGACCTCTTGA
TCCTTAACGCGGGAATCATGAACTGCCCGCCTGCCCTGACAGAGGAAGGA
TTCGAGATACAATTCGGGACGAATCATATCGGGCATTTCCTACTTACCCA
GCTACTACTACCCACACTGCAACGAACGGTTGATCTTTCCAGGGATGTTC
GTGTAGTAACGTTGTCCTCTGCCGCGAATGTCGCCGCGCCTCCCTTCGAA
GTCATGACTTCTACGCCGGCTTTACTAGCGGATCACACATTGGCCCGATA
CTGTTCATCAAAGGCAGCGAATATCCTTTTTGCGTCGGAGCTGGCTCGTC
GCCATCCGGAGATTCTGTCTGTCGCGGTACATCCCGGCTCCGTCGTGAGC
GACCTATGGGATCATTCGATCAAGACGAGTGTCGTCGCCAAATACAGTAT
CGGCGCTCTTCTGGCGTTCAGTCGGGGCATACGGAGCGGAGCACTCAACC
AACTCTGGGCCGCAGGGGCGAGAAGAGAATTGCTGACCAACGGAGCTTAT
TATGTTCCCATTGGGGTACACGCTACGGGCAACCGGTACGCAAGGGACGC
CGATATGGCACGGCGACTGTGGGAGTGGACTGAGCAGCAGATTGCGGACA
AATCGTAAATGGCATCTATTGTCAATTTCATCTCGAATGTGCTCCTCCGC
CCTGTGGAGTCCTACTGCAGCTTCGGTCCGACGGTGAGTGAAATCACCTT
TGGACAGCTGGGGTACTCCTTCAATCCCGAACGCGACATCAATGATCTGT
CAGGGAAGGTTGTCTTCGTCACTGGAGGAAATGCCGGTCTAGGAAAAGAA
ACCATCCTCCAACTCGCCCATCACCGCCCATCTCGCATCTACCTTGGTGC
ACGGAATGCGATCAAAGCCGAAGATGCCATCGCTTCAATCCGGGAGCAGG
TTCCATCCGCCGATATCAGACACATATCCCTCGACCTGTCCTCATTCAAG
TCGATCCGTGCCGCTGCCGAGCAGTTCACGTCAGAATGCGATCGCCTGGA
CCTCTTGATCCTTAACGCGGGAATCATGAACTGCCCGCCTGCCCTGACAG
AGGAAGGATTCGAGATACAATTCGGGACGAATCATATCGGGCATTTCCTA
CTTACCCAGCTACTACTACCCACACTGCAACGAACGGTTGATCTTTCCAG
GGATGTTCGTGTAGTAACGTTGTCCTCTGCCGCGAATGTCGCCGCGCCTC
CCTTCGAAGTCATGACTTCTACGCCGGCTTTACTAGCGGATCACACATTG
GCCCGATACTGTTCATCAAAGGCAGCGAATATCCTTTTTGCGTCGGAGCT
GGCTCGTCGCCATCCGGAGATTCTGTCTGTCGCGGTACATCCCGGCTCCG
TCGTGAGCGACCTATGGGATCATTCGATCAAGACGAGTGTCGTCGCCAAA
TACAGTATCGGCGCTCTTCTGGCGTTCAGTCGGGGCATACGGAGCGGAGC
ACTCAACCAACTCTGGGCCGCAGGGGCGAGAAGAGAATTGCTGACCAACG
GAGCTTATTATGTTCCCATTGGGGTACACGCTACGGGCAACCGGTACGCA
AGGGACGCCGATATGGCACGGCGACTGTGGGAGTGGACTGAGCAGCAGAT
TGCGGACAAATCGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_330278M747DRAFT_330278Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330278-T1.utr5p1M747DRAFT_330278-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330278-T1.exon1M747DRAFT_330278-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_330278-T1.exon2M747DRAFT_330278-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330278-T1.cdsM747DRAFT_330278-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330278-T1.utr3p1M747DRAFT_330278-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330278-T1M747DRAFT_330278-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
ProductNAD(P)-binding protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851909.1supercontigKZ851909.1:201120..202953 +