You are here

Home

M747DRAFT_330292-T1, M747DRAFT_330292-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_330292-T1
Unique NameM747DRAFT_330292-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851909.1:239901..242027-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_330292-T1 ID=M747DRAFT_330292-T1|Name=M747DRAFT_330292-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2127bp|location=Sequence derived from alignment at KZ851909.1:239901..242027- (Aspergillus niger ATCC 13496)
ACATCATCACCTATACAAAAGCACTTTAAAGTAACATAGATCAAGGTCTC
TGCCAATTCCCCCACCATGGACTCACTGACTAATCGGAGACCAATGGCAG
AATTCTTCAATGATGAACAGCCATCTCTTGTAAAGAGACACATTCCCACT
AAAACTGGAGATAGAGCCAGTCATCTGCATCTGTGGCAAGGAGCTGCATT
TCCTTGTCAGTCAGTTACACCGATATAAGCCACATATACTTCCAATCACC
AAACAATGACTGGAAACAAAAGAAAGAATCCGCGAGACTTGACTCGTCTC
TCCGGAAAACCACTTGCGGAGACTCTCGAGCCATCTTCGATTTTGGCAAG
CAGCACAGAAGAATGGGTCACCTCTCAAGACCTGGCTGAGCATGGTCTCC
CGTTCAAGCCGGAAGTCATCCAAGATATGACCATCTTCCTCCTGGCAAAC
CCGAATATGAGCTCAACCCATCTATACCGGGCAGACATCCTCTTCGACAG
CTGGGGTTCACTGCGAACACCGCAACAGAAAGAGCAGTCCTTCGCTCAGA
ATGGGAACAGCAATCTGGAGACGGCTGAAGAGCATGTGGAACCCATCACC
GCAAGGCAAATCCCCAATTTCACTCTCACCAGAACGGTCGTGAGGAGACT
CATTCCCAGGAACCCGAACCTGGACAGGGTCATGGACCAAACATGTCACT
TCTACGAACACATCAACGAGTCCACAGACACAAACGAGGAGTCTATTAAC
CGATACCTCGCTGTCTATACCCCCCACGTCACCTCCAAAGAAGACATGCC
CTTCTACCACCCTCTCCTCCGTTCCCTAGCTTTCCTATACGACTACAACA
CTCACAACAACACATCAGAACCCTCCCCTAACCCCGGCACCATGTCCATT
CACTTCCTCCTCTTCCCCAACGAACCCATCCAAAACCGTCTAGAACGCAC
CCTACAAGCCCTCCTGACTATCCAAATCCGCCTCGCCCGCGGCACCCGTC
TAACCGGCAAACCAGAAGGGGGCGGCGGCGCCAGTCAAAACCCAGCCAAA
GACAACGTGATCCCTCAGCACCTAGTGCAAAACACTTACACGCGTCTGAA
GGCAAAGTACGCCGCAGAGCTCTGCCAAAACTGGGTCGAGAGCACCGAGC
CCTCCAAGCATGTCTTCGAAGACCTCGCAATCACCGCATTCCTCATTGAA
CTCTGGAGAAGCATGTACGGCGCTGTCCCAGCAGACGAGCAAACCTCCTC
CCCATCTACCTCCTCTTTCCCCGGCTTCGTCGACGTAGCCTGTGGCAACG
GCGTCCTCGTCTACGTCCTGCTCATGGAAGGCTACAAAGGCTGGGGCTTC
GACGCCCGCCGACGCAAAACATGGAGCATATTTCCAGAGTCCGTGCAATC
ACGACTCACAGAGGAGATCTACATCCCAAAACCATTCTCCGAAACGAACC
CCTCTCTGCTCCAAGAGCTCACCATAAAATCCCACTCGGGGTCCTTCCCA
AAAGACACATTCATTATCTCCAACCACGCAGATGAACTCACCGTCTGGAC
TCCGCTCATGGCTACGCTCCTTTGTCCCGAGTCGCCATCACCCTTTATCG
CTATCCCATGCTGCTCGCATTCGCTCTCTGGAGCGAGATTCCGGTATCCG
CCTCCTAAGGCGGGCAAGAAAAAGGAGAAATCAGACAAAGAAGACGAAGG
AGGAATGGAAGAAGAGACCAATCCATCATCAGGAGACCTCAAATCCCTCC
GGAAGGAGAAACAGGATGCTCAGACCACGGAAGCAGGGTTCCTTAAGTCA
ATGTATGGTTCGTTGACGGCGAAGACGATGAGTGTGGCGGAGGAAATCGG
GTACGAGGTGGAGAGGACGCTGTTGCGGATTCCTAGTACGAGGAATATGG
CTGTTATTGGAGGAAGAAGGCGGACGACACAGGTGTGGAAGGAGAGGGGA
AGTGGATTGGTTGATGGTGGTGGTGGTGACGGAGAAGTAGTCCTGGAGCG
GGTTATGGATGCTGTAAGGCGGGAGTGTTCGCGTGAGGGGGGCGTTGAGG
CTGCTGGGAAGATCTGGATTGAGAGGGCGAAGGGGTTGAATAAGGGGTCT
GGGATGGGGAAACAGGGTGGGCATTGA
back to top

Coding sequence (CDS) from alignment at KZ851909.1:239901..242027-

>M747DRAFT_330292-T1 ID=M747DRAFT_330292-T1|Name=M747DRAFT_330292-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1872bp|location=Sequence derived from alignment at KZ851909.1:239901..242027- (Aspergillus niger ATCC 13496)
ATGACTGGAAACAAAAGAAAGAATCCGCGAGACTTGACTCGTCTCTCCGG
AAAACCACTTGCGGAGACTCTCGAGCCATCTTCGATTTTGGCAAGCAGCA
CAGAAGAATGGGTCACCTCTCAAGACCTGGCTGAGCATGGTCTCCCGTTC
AAGCCGGAAGTCATCCAAGATATGACCATCTTCCTCCTGGCAAACCCGAA
TATGAGCTCAACCCATCTATACCGGGCAGACATCCTCTTCGACAGCTGGG
GTTCACTGCGAACACCGCAACAGAAAGAGCAGTCCTTCGCTCAGAATGGG
AACAGCAATCTGGAGACGGCTGAAGAGCATGTGGAACCCATCACCGCAAG
GCAAATCCCCAATTTCACTCTCACCAGAACGGTCGTGAGGAGACTCATTC
CCAGGAACCCGAACCTGGACAGGGTCATGGACCAAACATGTCACTTCTAC
GAACACATCAACGAGTCCACAGACACAAACGAGGAGTCTATTAACCGATA
CCTCGCTGTCTATACCCCCCACGTCACCTCCAAAGAAGACATGCCCTTCT
ACCACCCTCTCCTCCGTTCCCTAGCTTTCCTATACGACTACAACACTCAC
AACAACACATCAGAACCCTCCCCTAACCCCGGCACCATGTCCATTCACTT
CCTCCTCTTCCCCAACGAACCCATCCAAAACCGTCTAGAACGCACCCTAC
AAGCCCTCCTGACTATCCAAATCCGCCTCGCCCGCGGCACCCGTCTAACC
GGCAAACCAGAAGGGGGCGGCGGCGCCAGTCAAAACCCAGCCAAAGACAA
CGTGATCCCTCAGCACCTAGTGCAAAACACTTACACGCGTCTGAAGGCAA
AGTACGCCGCAGAGCTCTGCCAAAACTGGGTCGAGAGCACCGAGCCCTCC
AAGCATGTCTTCGAAGACCTCGCAATCACCGCATTCCTCATTGAACTCTG
GAGAAGCATGTACGGCGCTGTCCCAGCAGACGAGCAAACCTCCTCCCCAT
CTACCTCCTCTTTCCCCGGCTTCGTCGACGTAGCCTGTGGCAACGGCGTC
CTCGTCTACGTCCTGCTCATGGAAGGCTACAAAGGCTGGGGCTTCGACGC
CCGCCGACGCAAAACATGGAGCATATTTCCAGAGTCCGTGCAATCACGAC
TCACAGAGGAGATCTACATCCCAAAACCATTCTCCGAAACGAACCCCTCT
CTGCTCCAAGAGCTCACCATAAAATCCCACTCGGGGTCCTTCCCAAAAGA
CACATTCATTATCTCCAACCACGCAGATGAACTCACCGTCTGGACTCCGC
TCATGGCTACGCTCCTTTGTCCCGAGTCGCCATCACCCTTTATCGCTATC
CCATGCTGCTCGCATTCGCTCTCTGGAGCGAGATTCCGGTATCCGCCTCC
TAAGGCGGGCAAGAAAAAGGAGAAATCAGACAAAGAAGACGAAGGAGGAA
TGGAAGAAGAGACCAATCCATCATCAGGAGACCTCAAATCCCTCCGGAAG
GAGAAACAGGATGCTCAGACCACGGAAGCAGGGTTCCTTAAGTCAATGTA
TGGTTCGTTGACGGCGAAGACGATGAGTGTGGCGGAGGAAATCGGGTACG
AGGTGGAGAGGACGCTGTTGCGGATTCCTAGTACGAGGAATATGGCTGTT
ATTGGAGGAAGAAGGCGGACGACACAGGTGTGGAAGGAGAGGGGAAGTGG
ATTGGTTGATGGTGGTGGTGGTGACGGAGAAGTAGTCCTGGAGCGGGTTA
TGGATGCTGTAAGGCGGGAGTGTTCGCGTGAGGGGGGCGTTGAGGCTGCT
GGGAAGATCTGGATTGAGAGGGCGAAGGGGTTGAATAAGGGGTCTGGGAT
GGGGAAACAGGGTGGGCATTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRM44M747DRAFT_330292Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330292-T1.cdsM747DRAFT_330292-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330292-T1.exon2M747DRAFT_330292-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_330292-T1.exon1M747DRAFT_330292-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330292-T1.utr5p2M747DRAFT_330292-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_330292-T1.utr5p1M747DRAFT_330292-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330292-T1M747DRAFT_330292-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092614DJ
DBxrefInterPro:IPR011671
DBxrefPFAM:PF07757
ProducttRNA(Ser) Um(44) 2'-O-methyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851909.1supercontigKZ851909.1:239901..242027 -
Powered by Drupal