You are here

Home

M747DRAFT_330476-T1, M747DRAFT_330476-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_330476-T1
Unique NameM747DRAFT_330476-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851910.1:65608..66775+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_330476-T1 ID=M747DRAFT_330476-T1|Name=M747DRAFT_330476-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1168bp|location=Sequence derived from alignment at KZ851910.1:65608..66775+ (Aspergillus niger ATCC 13496)
ATGGCTTCGCGTTTGGCTAAGAGCGCCCTTGGTATGCCGAACTAGACTCT
TTTCGGCTTGCTTTATCAACTGGCTATGATTGTTAACGCCCCCTAGGTGC
TGCCCGGCTCCGGCCGACCCTTCCCACGCGCAACGTCGCTCCCATCACTG
CCACCTTGACCGCGTCTCGCTCGGTCTCCAACGTTCCCACCGAGGACCCC
AAGAAGAAGGCTCAGTCCATCATCGATGCCCTCCCCGGCAACTCCCTGGT
CTCCAAGACCGCCGTCCTCTCTGCCGCTGCCGGTATCTCCATCGCTGCCA
TCAGCAACGAGCTCTATGTTATGAACGAGGAAACCGTTGCTGCTTTCTGT
CTTCTCAGCGTCTTCACTGCCGTTGCCAAGTACGGTGGTCCTGCTTACCG
TGAGTGGGCTGAGGGTCAGGTTCAGAAGCACAAGGACATCCTGAACGCTG
CCCGTGCCGACCACACCAACGCCGTTAAGCAGCGTATGGAGAACGTCCAG
GAGCTCTCCAGCGTTGTTGAGCTCACTAAGCAGCTGTTCGCTGTTTCCAA
GGTACATTCAGATCCTTTCCATACTCATCCGATCGAAACGTGGTCGGGTT
AGCGGACGCAGGAAGCTAATGGTATATAAAGGAAACCGCTCAGCTTGAGG
CTCAGGCCTACGAGCTTGAGCAGCGCACTGCTCTGGCTACCGAGGCTAAG
CAGGTTCTCGACTCCTGGGTTCGCTACGAGGGCCAGGTTAAGCAGCGCCA
GCAGCGTGAGCTTGCCGAGAGCGTCATCGGCAAGATCCAGAAGGAGCTTG
AGAACCCCAAGGTTCTCCAGCAGATCCTTCAGCAGAGCGTTGCTGATGTT
GAGCGTAAGTTGATTTCTTGTGAGCAGCATTTTTTTGATACAATGCTTAC
GACTATTTACAGGTATCATGTCCTCCAAGGCCCAGTAAATGGACTAGCAT
GATTAGCCCCGCCGTCAGCCTATGTACAAATTAAAGATCTTTTCTGTTGT
CATTAGACATACCAATACCAATGTGGTCAGTTTAAGAGACGTATACTCGA
GTAGCTAGACTTAGGTTTGTCGGTCTACATCCGTATTAGAGCTTTGCTCG
ATGAGCTCCTGGAATCTGCTGTCATTGTGCCATGGAGAAATATGGCTCGC
ACCAAACTGTATATTTAC
back to top

Coding sequence (CDS) from alignment at KZ851910.1:65608..66775+

>M747DRAFT_330476-T1 ID=M747DRAFT_330476-T1|Name=M747DRAFT_330476-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2940bp|location=Sequence derived from alignment at KZ851910.1:65608..66775+ (Aspergillus niger ATCC 13496)
ATGGCTTCGCGTTTGGCTAAGAGCGCCCTTGGTGCTGCCCGGCTCCGGCC
GACCCTTCCCACGCGCAACGTCGCTCCCATCACTGCCACCTTGACCGCGT
CTCGCTCGGTCTCCAACGTTCCCACCGAGGACCCCAAGAAGAAGGCTCAG
TCCATCATCGATGCCCTCCCCGGCAACTCCCTGGTCTCCAAGACCGCCGT
CCTCTCTGCCGCTGCCGGTATCTCCATCGCTGCCATCAGCAACGAGCTCT
ATGTTATGAACGAGGAAACCGTTGCTGCTTTCTGTCTTCTCAGCGTCTTC
ACTGCCGTTGCCAAGTACGGTGGTCCTGCTTACCGTGAGTGGGCTGAGGG
TCAGGTTCAGAAGCACAAGGACATCCTGAACGCTGCCCGTGCCGACCACA
CCAACGCCGTTAAGCAGCGTATGGAGAACGTCCAGGAGCTCTCCAGCGTT
GTTGAGCTCACTAAGCAGCTGTTCGCTGTTTCCAAGGAAACCGCTCAGCT
TGAGGCTCAGGCCTACGAGCTTGAGCAGCGCACTGCTCTGGCTACCGAGG
CTAAGCAGGTTCTCGACTCCTGGGTTCGCTACGAGGGCCAGGTTAAGCAG
CGCCAGCAGCGTGAGCTTGCCGAGAGCGTCATCGGCAAGATCCAGAAGGA
GCTTGAGAACCCCAAGGTTCTCCAGCAGATCCTTCAGCAGAGCGTTGCTG
ATGTTGAGCGTATCATGTCCTCCAAGGCCCAGTAAATGGCTTCGCGTTTG
GCTAAGAGCGCCCTTGGTGCTGCCCGGCTCCGGCCGACCCTTCCCACGCG
CAACGTCGCTCCCATCACTGCCACCTTGACCGCGTCTCGCTCGGTCTCCA
ACGTTCCCACCGAGGACCCCAAGAAGAAGGCTCAGTCCATCATCGATGCC
CTCCCCGGCAACTCCCTGGTCTCCAAGACCGCCGTCCTCTCTGCCGCTGC
CGGTATCTCCATCGCTGCCATCAGCAACGAGCTCTATGTTATGAACGAGG
AAACCGTTGCTGCTTTCTGTCTTCTCAGCGTCTTCACTGCCGTTGCCAAG
TACGGTGGTCCTGCTTACCGTGAGTGGGCTGAGGGTCAGGTTCAGAAGCA
CAAGGACATCCTGAACGCTGCCCGTGCCGACCACACCAACGCCGTTAAGC
AGCGTATGGAGAACGTCCAGGAGCTCTCCAGCGTTGTTGAGCTCACTAAG
CAGCTGTTCGCTGTTTCCAAGGAAACCGCTCAGCTTGAGGCTCAGGCCTA
CGAGCTTGAGCAGCGCACTGCTCTGGCTACCGAGGCTAAGCAGGTTCTCG
ACTCCTGGGTTCGCTACGAGGGCCAGGTTAAGCAGCGCCAGCAGCGTGAG
CTTGCCGAGAGCGTCATCGGCAAGATCCAGAAGGAGCTTGAGAACCCCAA
GGTTCTCCAGCAGATCCTTCAGCAGAGCGTTGCTGATGTTGAGCGTATCA
TGTCCTCCAAGGCCCAGTAAATGGCTTCGCGTTTGGCTAAGAGCGCCCTT
GGTGCTGCCCGGCTCCGGCCGACCCTTCCCACGCGCAACGTCGCTCCCAT
CACTGCCACCTTGACCGCGTCTCGCTCGGTCTCCAACGTTCCCACCGAGG
ACCCCAAGAAGAAGGCTCAGTCCATCATCGATGCCCTCCCCGGCAACTCC
CTGGTCTCCAAGACCGCCGTCCTCTCTGCCGCTGCCGGTATCTCCATCGC
TGCCATCAGCAACGAGCTCTATGTTATGAACGAGGAAACCGTTGCTGCTT
TCTGTCTTCTCAGCGTCTTCACTGCCGTTGCCAAGTACGGTGGTCCTGCT
TACCGTGAGTGGGCTGAGGGTCAGGTTCAGAAGCACAAGGACATCCTGAA
CGCTGCCCGTGCCGACCACACCAACGCCGTTAAGCAGCGTATGGAGAACG
TCCAGGAGCTCTCCAGCGTTGTTGAGCTCACTAAGCAGCTGTTCGCTGTT
TCCAAGGAAACCGCTCAGCTTGAGGCTCAGGCCTACGAGCTTGAGCAGCG
CACTGCTCTGGCTACCGAGGCTAAGCAGGTTCTCGACTCCTGGGTTCGCT
ACGAGGGCCAGGTTAAGCAGCGCCAGCAGCGTGAGCTTGCCGAGAGCGTC
ATCGGCAAGATCCAGAAGGAGCTTGAGAACCCCAAGGTTCTCCAGCAGAT
CCTTCAGCAGAGCGTTGCTGATGTTGAGCGTATCATGTCCTCCAAGGCCC
AGTAAATGGCTTCGCGTTTGGCTAAGAGCGCCCTTGGTGCTGCCCGGCTC
CGGCCGACCCTTCCCACGCGCAACGTCGCTCCCATCACTGCCACCTTGAC
CGCGTCTCGCTCGGTCTCCAACGTTCCCACCGAGGACCCCAAGAAGAAGG
CTCAGTCCATCATCGATGCCCTCCCCGGCAACTCCCTGGTCTCCAAGACC
GCCGTCCTCTCTGCCGCTGCCGGTATCTCCATCGCTGCCATCAGCAACGA
GCTCTATGTTATGAACGAGGAAACCGTTGCTGCTTTCTGTCTTCTCAGCG
TCTTCACTGCCGTTGCCAAGTACGGTGGTCCTGCTTACCGTGAGTGGGCT
GAGGGTCAGGTTCAGAAGCACAAGGACATCCTGAACGCTGCCCGTGCCGA
CCACACCAACGCCGTTAAGCAGCGTATGGAGAACGTCCAGGAGCTCTCCA
GCGTTGTTGAGCTCACTAAGCAGCTGTTCGCTGTTTCCAAGGAAACCGCT
CAGCTTGAGGCTCAGGCCTACGAGCTTGAGCAGCGCACTGCTCTGGCTAC
CGAGGCTAAGCAGGTTCTCGACTCCTGGGTTCGCTACGAGGGCCAGGTTA
AGCAGCGCCAGCAGCGTGAGCTTGCCGAGAGCGTCATCGGCAAGATCCAG
AAGGAGCTTGAGAACCCCAAGGTTCTCCAGCAGATCCTTCAGCAGAGCGT
TGCTGATGTTGAGCGTATCATGTCCTCCAAGGCCCAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATP4M747DRAFT_330476Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330476-T1M747DRAFT_330476-T1-proteinAspergillus niger ATCC 13496polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330476-T1.exon1M747DRAFT_330476-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_330476-T1.exon2M747DRAFT_330476-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_330476-T1.exon3M747DRAFT_330476-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_330476-T1.exon4M747DRAFT_330476-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330476-T1.cdsM747DRAFT_330476-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_330476-T1.utr3p1M747DRAFT_330476-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264PE5
DBxrefInterPro:IPR008688
DBxrefPFAM:PF05405
Productatp4 subunit B of the stator stalk of mitochondrial F1F0 ATP synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851910.1supercontigKZ851910.1:65608..66775 +
Powered by Drupal