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M747DRAFT_331912-T1, M747DRAFT_331912-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_331912-T1
Unique NameM747DRAFT_331912-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851917.1:206462..207272-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_331912-T1 ID=M747DRAFT_331912-T1|Name=M747DRAFT_331912-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=811bp|location=Sequence derived from alignment at KZ851917.1:206462..207272- (Aspergillus niger ATCC 13496)
GACCTTCTCTTCTGACTCCCAGCCTCTGTGAATCATCTTCCAAGCTATAT
CATCAATCAACAATCATGCTCACCAAGAACCTTCTCCTCTGCTTTGCCGC
GGCTAAGGCTGCTCTGGCTGTTCCCCACGACTCTGTCGCCCAGCGTTCGG
ATGCCTTGCACATGCTCTCTGAGCGCTCGACCCCGAGCTCGACCGGCGAG
AACAACGGCTTCTACTACTCCTTCTGGACCGACGGCGGTGGCGACGTGAC
CTACACCAACGGAGATGCTGGTGCCTACACTGTTGAGTGGTCCAACGTGG
GCAACTTTGTCGGTGGAAAGGGCTGGAACCCCGGAAGTGCGCAGTAAGTT
AATCATCCTCACACTATCTCTTTAAAGGATCCAATAAAACGATTACTCAC
ATCATCTCCAGGGACATCACCTACAGCGGCACCTTCACCCCTAGCGGCAA
CGGCTATCTCTCCGTCTATGGCTGGACCACTGACCCCCTGATCGAGTACT
ACATCGTCGAGTCCTACGGCGACTACAACCCCGGCAGTGGAGGCACATAC
AAGGGCACCGTCACCTCGGACGGATCCGTTTACGATATCTACACGGCTAC
CCGTACCAATGCTGCTTCCATTCAGGGAACCGCTACCTTCACTCAGTACT
GGTCCGTCCGCCAGAACAAGAGAGTTGGCGGAACTGTTACCACCTCCAAC
CACTTCAATGCTTGGGCTAAGCTGGGAATGAACCTGGGTACTCACAACTA
CCAGATCGTGGCTACCGAGGGTTACCAGAGCAGTGGATCTTCGTCCATCA
CTGTTCAGTAA
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Coding sequence (CDS) from alignment at KZ851917.1:206462..207272-

>M747DRAFT_331912-T1 ID=M747DRAFT_331912-T1|Name=M747DRAFT_331912-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1356bp|location=Sequence derived from alignment at KZ851917.1:206462..207272- (Aspergillus niger ATCC 13496)
GGACATCACCTACAGCGGCACCTTCACCCCTAGCGGCAACGGCTATCTCT
CCGTCTATGGCTGGACCACTGACCCCCTGATCGAGTACTACATCGTCGAG
TCCTACGGCGACTACAACCCCGGCAGTGGAGGCACATACAAGGGCACCGT
CACCTCGGACGGATCCGTTTACGATATCTACACGGCTACCCGTACCAATG
CTGCTTCCATTCAGGGAACCGCTACCTTCACTCAGTACTGGTCCGTCCGC
CAGAACAAGAGAGTTGGCGGAACTGTTACCACCTCCAACCACTTCAATGC
TTGGGCTAAGCTGGGAATGAACCTGGGTACTCACAACTACCAGATCGTGG
CTACCGAGGGTTACCAGAGCAGTGGATCTTCGTCCATCACTGTTCAGTAA
ATGCTCACCAAGAACCTTCTCCTCTGCTTTGCCGCGGCTAAGGCTGCTCT
GGCTGTTCCCCACGACTCTGTCGCCCAGCGTTCGGATGCCTTGCACATGC
TCTCTGAGCGCTCGACCCCGAGCTCGACCGGCGAGAACAACGGCTTCTAC
TACTCCTTCTGGACCGACGGCGGTGGCGACGTGACCTACACCAACGGAGA
TGCTGGTGCCTACACTGTTGAGTGGTCCAACGTGGGCAACTTTGTCGGTG
GAAAGGGCTGGAACCCCGGAAGTGCGCAGGACATCACCTACAGCGGCACC
TTCACCCCTAGCGGCAACGGCTATCTCTCCGTCTATGGCTGGACCACTGA
CCCCCTGATCGAGTACTACATCGTCGAGTCCTACGGCGACTACAACCCCG
GCAGTGGAGGCACATACAAGGGCACCGTCACCTCGGACGGATCCGTTTAC
GATATCTACACGGCTACCCGTACCAATGCTGCTTCCATTCAGGGAACCGC
TACCTTCACTCAGTACTGGTCCGTCCGCCAGAACAAGAGAGTTGGCGGAA
CTGTTACCACCTCCAACCACTTCAATGCTTGGGCTAAGCTGGGAATGAAC
CTGGGTACTCACAACTACCAGATCGTGGCTACCGAGGGTTACCAGAGCAG
TGGATCTTCGTCCATCACTGTTCAGTAAATGCTCACCAAGAACCTTCTCC
TCTGCTTTGCCGCGGCTAAGGCTGCTCTGGCTGTTCCCCACGACTCTGTC
GCCCAGCGTTCGGATGCCTTGCACATGCTCTCTGAGCGCTCGACCCCGAG
CTCGACCGGCGAGAACAACGGCTTCTACTACTCCTTCTGGACCGACGGCG
GTGGCGACGTGACCTACACCAACGGAGATGCTGGTGCCTACACTGTTGAG
TGGTCCAACGTGGGCAACTTTGTCGGTGGAAAGGGCTGGAACCCCGGAAG
TGCGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_331912M747DRAFT_331912Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_331912-T1M747DRAFT_331912-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_331912-T1.cdsM747DRAFT_331912-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_331912-T1.exon2M747DRAFT_331912-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_331912-T1.exon1M747DRAFT_331912-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_331912-T1.utr5p1M747DRAFT_331912-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH11
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR033119
DBxrefInterPro:IPR018208
DBxrefInterPro:IPR033123
DBxrefInterPro:IPR013319
DBxrefInterPro:IPR001137
DBxrefPFAM:PF00457
Product4-xylanase xynB
Productendo-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851917.1supercontigKZ851917.1:206462..207272 -
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