You are here

M747DRAFT_332441-T1, M747DRAFT_332441-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_332441-T1
Unique NameM747DRAFT_332441-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851920.1:378746..379994-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_332441-T1 ID=M747DRAFT_332441-T1|Name=M747DRAFT_332441-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1249bp|location=Sequence derived from alignment at KZ851920.1:378746..379994- (Aspergillus niger ATCC 13496)
ATCCGTCCCGAACCCAAAGCTCCCGAGAGTCCAACAGTTCTGAGATATAA ACCTACTAAACAGGCCTCCCTTAGATATACCAACATATCAACAAACAACC CAAATCTAACTTACTACATTTCACCACATCGCCAAAATGACCGAACTAAG AATCACCAAAATCGACGTCTTTCAAGTCGACCTCCCCTACTCTCACGGCA CATACCACCTCTCCGGCGGCCGGGCAATCACCCGCTTCGACGCCACTTTC GTCCGCGTCACCACCAACACCGGCCTCGAAGGCTGGGGCGAAAGCACCCC CTTCGACAACTACATTGCATCGCATGCCGGCGGAGTCAGAGCCGCTATCG CAGAGATCGCCCCCAAGCTCGTCGGCCTCGACCCCCGCCGAGTCGATCGC CTCAACGATGCCATGGACGCCGCCTTACTAGGCAACGAGCCAGCAAAATC CGCCATCGATATTGCCTGCTGGGATATCTTCGGCAAGTCTGTTGGACTTC CCGTGTGTGAGTTGCTCGGCGGACGGACAGAAACGAAGCTCCCTGTTCTG GAGTCGATCCCCGTTGCGGATCCTGAGGGGACGCGCAAGCATGTTGCTGA TGCAAGGGCGTTGGGGTTTACGGGGTTCTCGGTGAAGATTGGCTCGGACC CCGTGGCTAATGCTGCACGGGTGGAAGCTGCTCTGGTGGATAAGAGACCA GGGGAGTTCTTTTTGATCGATGCTAATGGTGGCATGACTGTTGATACTGC GCTTCGGATGTTCAGGTTACTTCCTAAAGGGCTGGACTTTGTCCTGGAAG CGCCCTGTGCTACGTATAGGGAGAGCATGTCGCTTCGACGACGGATTGAT GTGCCGATTATCTTTGATGAGTTGGCGAACAATGAGAGCTCGATTGTGCA GTTCGTTGCGGATGATGCTGTTGATGGGATCGGGTTGAAGATTTCCAAGA CGGGTGGGTTGACGCGAGGACGCAGGGTTAGGGATATTTGTCTTGCGGCG GGGTATACCATGTCTGTTCAGGATACGAGTGGTTCGGACGTGGCGTTTGC GGCGATTGTGCATCTCGGACAGACTATTCCGGAGCAGTATTTGAGGTGTA TCTTGGAGTGCAGGGCTATGTGTGTTGGGAAGACGGCGGATGGGCCGTTT GATGTGCATGAGGGGGTCCTGACGGCACCGACTTGTCCGGGGTTGGGGGT TAGGCCGAGGATGGATGTGTTGGGAGAGCCGGTTGCTAGTTATGATTGA
back to top

Coding sequence (CDS) from alignment at KZ851920.1:378746..379994-

>M747DRAFT_332441-T1 ID=M747DRAFT_332441-T1|Name=M747DRAFT_332441-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1113bp|location=Sequence derived from alignment at KZ851920.1:378746..379994- (Aspergillus niger ATCC 13496)
ATGACCGAACTAAGAATCACCAAAATCGACGTCTTTCAAGTCGACCTCCC
CTACTCTCACGGCACATACCACCTCTCCGGCGGCCGGGCAATCACCCGCT
TCGACGCCACTTTCGTCCGCGTCACCACCAACACCGGCCTCGAAGGCTGG
GGCGAAAGCACCCCCTTCGACAACTACATTGCATCGCATGCCGGCGGAGT
CAGAGCCGCTATCGCAGAGATCGCCCCCAAGCTCGTCGGCCTCGACCCCC
GCCGAGTCGATCGCCTCAACGATGCCATGGACGCCGCCTTACTAGGCAAC
GAGCCAGCAAAATCCGCCATCGATATTGCCTGCTGGGATATCTTCGGCAA
GTCTGTTGGACTTCCCGTGTGTGAGTTGCTCGGCGGACGGACAGAAACGA
AGCTCCCTGTTCTGGAGTCGATCCCCGTTGCGGATCCTGAGGGGACGCGC
AAGCATGTTGCTGATGCAAGGGCGTTGGGGTTTACGGGGTTCTCGGTGAA
GATTGGCTCGGACCCCGTGGCTAATGCTGCACGGGTGGAAGCTGCTCTGG
TGGATAAGAGACCAGGGGAGTTCTTTTTGATCGATGCTAATGGTGGCATG
ACTGTTGATACTGCGCTTCGGATGTTCAGGTTACTTCCTAAAGGGCTGGA
CTTTGTCCTGGAAGCGCCCTGTGCTACGTATAGGGAGAGCATGTCGCTTC
GACGACGGATTGATGTGCCGATTATCTTTGATGAGTTGGCGAACAATGAG
AGCTCGATTGTGCAGTTCGTTGCGGATGATGCTGTTGATGGGATCGGGTT
GAAGATTTCCAAGACGGGTGGGTTGACGCGAGGACGCAGGGTTAGGGATA
TTTGTCTTGCGGCGGGGTATACCATGTCTGTTCAGGATACGAGTGGTTCG
GACGTGGCGTTTGCGGCGATTGTGCATCTCGGACAGACTATTCCGGAGCA
GTATTTGAGGTGTATCTTGGAGTGCAGGGCTATGTGTGTTGGGAAGACGG
CGGATGGGCCGTTTGATGTGCATGAGGGGGTCCTGACGGCACCGACTTGT
CCGGGGTTGGGGGTTAGGCCGAGGATGGATGTGTTGGGAGAGCCGGTTGC
TAGTTATGATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_332441M747DRAFT_332441Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332441-T1.cdsM747DRAFT_332441-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332441-T1.exon1M747DRAFT_332441-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332441-T1.utr5p1M747DRAFT_332441-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332441-T1M747DRAFT_332441-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519201.3
NoteEggNog:ENOG41
NoteSMCOG1268:mandelate racemase/muconate lactonizing enzyme
DBxrefInterPro:IPR029017
DBxrefInterPro:IPR013341
DBxrefInterPro:IPR029065
DBxrefInterPro:IPR036849
DBxrefInterPro:IPR013342
DBxrefPFAM:PF02746
DBxrefPFAM:PF13378
Productenolase C-terminal domain-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851920.1supercontigKZ851920.1:378746..379994 -