You are here

Home

M747DRAFT_332575-T1, M747DRAFT_332575-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_332575-T1
Unique NameM747DRAFT_332575-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851921.1:272623..274154-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_332575-T1 ID=M747DRAFT_332575-T1|Name=M747DRAFT_332575-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1532bp|location=Sequence derived from alignment at KZ851921.1:272623..274154- (Aspergillus niger ATCC 13496)
AGTGAGTCTCTTGGATCAAAATGTCTCTGTCCAAGAACTTCATCCGCTCA
AGCCGCACCACCCAGCAATCGCTATGTCGATGCAGCATATCCCGCCGACA
GGTGCAGCCTTCACAGGAACGCCACTTTAGCCGATCTCGCGCTGTCGCCG
CCCCAGTGACCGGAGCAAGTGAAGCCGAAGTCCAAGCAGCTCAGAAATAC
TGCTCGAATCTTCTTCTGTAAAGTCTTTCCAGTTGATTACCCATTTCAAC
CGGCAATCTATCTAATACATTCTTGGATCATGCCAGACAATACGACCGTC
CCTCCTATACCCTGAGCACCTTCATCCCCCGAAATGCGCAATCTTTCTAC
ATCGCTCTTCGAGCTCTTAATGTCTCTCTTTCCCTAATCCCCGACACCAC
CTCCTCCCACACCATCGGGCTTATGCGCCTCCAATTCTGGCGCGATGCAG
TTGCCAAAACACTATCCGGTTCACCCCCGAAAGAGCCAATTGCTATTCTC
CTCGCCTCTGCCATTTCAGACCTAGCCGAGCGAACACAAGGCCGGGCGCG
CATCAGCAAAGGCTGGCTGAACAGAATGATCAATGCCCGCGAACAAACCC
TTACCAACGACCCGTACCCTGATATCGCGGCACTCGAGTCCTACGCCGAA
AGCACATACTCGACATTGCTCTACCTCACACTCTCAGCACTCCCCATGAC
CTCGGTAACGGCGGACCATGTGGCGTCGCATATTGGAAAGGCAGCCGGTA
TCACAGCTGTACTTCGTGGTTTGCCATTGGTAGCATTCCCGGGTGCATCA
ACCCAACGTCCCGACCAGGCTGGTACGACAATGGCCGGTGGAGCTAAGCA
GGGAGCCGTAATGCTGCCATTGGATGTAATGGCGCAGGCTGGAGTGAAAG
AAGAAGAGGTGTTTCGCCTGGGCAGTGAGGCGCCAGGATTGCGGGATGCT
GTTTTTGCGGTGGCCACTCGCGCCAGCGACCACCTGATTACCGTGCAGCA
GATGCTAAGCAATATTCGTGCTGGGCAAGATGCAGGACATGATTTTGAGC
ACGGGCATGAAGAGGATCATCAGTATGATCTCGGATCCCAGAATGAGACA
CCGCTTCAGGAGGTCAATCGTGCCTTTGGAGTGTTTATGCCGGCCGTTGG
AACGCGGCTGTGGCTGGATAGGTTGGAGAGTCATGATTTTGATATCTTCC
AGCCTGAACTTCTCCGGTCGGATTGGAAGCTCCCTTGGAAGGCTTATATG
GCTTTTACACGGAAGACATTCTCTTAACCTGTGAGCCTTCGACATTTGGT
TAGTGTATGTGTATGATATGTTAGATGTACAATAGTATCGTGCACCAGGC
TAGGACCTGGCCGGCTTTACACAGTATGGCAAGAACCTTGCCATACTTCG
CCGTAACACAAGATTCGTTCCATGAAGGGGCAGAAGCCGTACTCGAGCAC
TGAATCTCAGTTCTATGAAGTTGGGGAGTTCCTGTAGGCAGACTGCACCT
GACTCCTTCCCCCCTTGCTTCCACGACCCTCT
back to top

Coding sequence (CDS) from alignment at KZ851921.1:272623..274154-

>M747DRAFT_332575-T1 ID=M747DRAFT_332575-T1|Name=M747DRAFT_332575-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2376bp|location=Sequence derived from alignment at KZ851921.1:272623..274154- (Aspergillus niger ATCC 13496)
ACAATACGACCGTCCCTCCTATACCCTGAGCACCTTCATCCCCCGAAATG
CGCAATCTTTCTACATCGCTCTTCGAGCTCTTAATGTCTCTCTTTCCCTA
ATCCCCGACACCACCTCCTCCCACACCATCGGGCTTATGCGCCTCCAATT
CTGGCGCGATGCAGTTGCCAAAACACTATCCGGTTCACCCCCGAAAGAGC
CAATTGCTATTCTCCTCGCCTCTGCCATTTCAGACCTAGCCGAGCGAACA
CAAGGCCGGGCGCGCATCAGCAAAGGCTGGCTGAACAGAATGATCAATGC
CCGCGAACAAACCCTTACCAACGACCCGTACCCTGATATCGCGGCACTCG
AGTCCTACGCCGAAAGCACATACTCGACATTGCTCTACCTCACACTCTCA
GCACTCCCCATGACCTCGGTAACGGCGGACCATGTGGCGTCGCATATTGG
AAAGGCAGCCGGTATCACAGCTGTACTTCGTGGTTTGCCATTGGTAGCAT
TCCCGGGTGCATCAACCCAACGTCCCGACCAGGCTGGTACGACAATGGCC
GGTGGAGCTAAGCAGGGAGCCGTAATGCTGCCATTGGATGTAATGGCGCA
GGCTGGAGTGAAAGAAGAAGAGGTGTTTCGCCTGGGCAGTGAGGCGCCAG
GATTGCGGGATGCTGTTTTTGCGGTGGCCACTCGCGCCAGCGACCACCTG
ATTACCGTGCAGCAGATGCTAAGCAATATTCGTGCTGGGCAAGATGCAGG
ACATGATTTTGAGCACGGGCATGAAGAGGATCATCAGTATGATCTCGGAT
CCCAGAATGAGACACCGCTTCAGGAGGTCAATCGTGCCTTTGGAGTGTTT
ATGCCGGCCGTTGGAACGCGGCTGTGGCTGGATAGGTTGGAGAGTCATGA
TTTTGATATCTTCCAGCCTGAACTTCTCCGGTCGGATTGGAAGCTCCCTT
GGAAGGCTTATATGGCTTTTACACGGAAGACATTCTCTTAAATGTCTCTG
TCCAAGAACTTCATCCGCTCAAGCCGCACCACCCAGCAATCGCTATGTCG
ATGCAGCATATCCCGCCGACAGGTGCAGCCTTCACAGGAACGCCACTTTA
GCCGATCTCGCGCTGTCGCCGCCCCAGTGACCGGAGCAAGTGAAGCCGAA
GTCCAAGCAGCTCAGAAATACTGCTCGAATCTTCTTCTACAATACGACCG
TCCCTCCTATACCCTGAGCACCTTCATCCCCCGAAATGCGCAATCTTTCT
ACATCGCTCTTCGAGCTCTTAATGTCTCTCTTTCCCTAATCCCCGACACC
ACCTCCTCCCACACCATCGGGCTTATGCGCCTCCAATTCTGGCGCGATGC
AGTTGCCAAAACACTATCCGGTTCACCCCCGAAAGAGCCAATTGCTATTC
TCCTCGCCTCTGCCATTTCAGACCTAGCCGAGCGAACACAAGGCCGGGCG
CGCATCAGCAAAGGCTGGCTGAACAGAATGATCAATGCCCGCGAACAAAC
CCTTACCAACGACCCGTACCCTGATATCGCGGCACTCGAGTCCTACGCCG
AAAGCACATACTCGACATTGCTCTACCTCACACTCTCAGCACTCCCCATG
ACCTCGGTAACGGCGGACCATGTGGCGTCGCATATTGGAAAGGCAGCCGG
TATCACAGCTGTACTTCGTGGTTTGCCATTGGTAGCATTCCCGGGTGCAT
CAACCCAACGTCCCGACCAGGCTGGTACGACAATGGCCGGTGGAGCTAAG
CAGGGAGCCGTAATGCTGCCATTGGATGTAATGGCGCAGGCTGGAGTGAA
AGAAGAAGAGGTGTTTCGCCTGGGCAGTGAGGCGCCAGGATTGCGGGATG
CTGTTTTTGCGGTGGCCACTCGCGCCAGCGACCACCTGATTACCGTGCAG
CAGATGCTAAGCAATATTCGTGCTGGGCAAGATGCAGGACATGATTTTGA
GCACGGGCATGAAGAGGATCATCAGTATGATCTCGGATCCCAGAATGAGA
CACCGCTTCAGGAGGTCAATCGTGCCTTTGGAGTGTTTATGCCGGCCGTT
GGAACGCGGCTGTGGCTGGATAGGTTGGAGAGTCATGATTTTGATATCTT
CCAGCCTGAACTTCTCCGGTCGGATTGGAAGCTCCCTTGGAAGGCTTATA
TGGCTTTTACACGGAAGACATTCTCTTAAATGTCTCTGTCCAAGAACTTC
ATCCGCTCAAGCCGCACCACCCAGCAATCGCTATGTCGATGCAGCATATC
CCGCCGACAGGTGCAGCCTTCACAGGAACGCCACTTTAGCCGATCTCGCG
CTGTCGCCGCCCCAGTGACCGGAGCAAGTGAAGCCGAAGTCCAAGCAGCT
CAGAAATACTGCTCGAATCTTCTTCT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_332575M747DRAFT_332575Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332575-T1M747DRAFT_332575-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332575-T1.cdsM747DRAFT_332575-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332575-T1.utr3p1M747DRAFT_332575-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332575-T1.exon2M747DRAFT_332575-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_332575-T1.exon1M747DRAFT_332575-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332575-T1.utr5p1M747DRAFT_332575-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008949
DBxrefPFAM:PF00494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851921.1supercontigKZ851921.1:272623..274154 -
Powered by Drupal