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M747DRAFT_332609-T1, M747DRAFT_332609-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_332609-T1
Unique NameM747DRAFT_332609-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851921.1:458483..460203-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_332609-T1 ID=M747DRAFT_332609-T1|Name=M747DRAFT_332609-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1721bp|location=Sequence derived from alignment at KZ851921.1:458483..460203- (Aspergillus niger ATCC 13496)
CACCTCAGCTCAAGCTCCTGGGCGACCTTCAAATCACAACACAATCACAT
TACGCCAGACACAGCCACTTTTTTTTTTCCAAATTACTCATCATGCCTCG
TGCCGTCAGAGGTATCACAACCGCAGCACCGTCCAATTCCAACTATCGCT
AACGAAGGCCTAAACAGGAGTCCTCATCGAGTGCGATCCGTCCGTGAAAG
CCATTATTCTCAAGTACGACGAAGAAAGACACGACTATATCGTTGAAGAC
CTCGACGATGACCGTCATCTGGTCATCAAGGAGAGCCAGCTGCAGAACCT
GAAGGCGAGGTTGACAAAGGTAGGGATGCCGGAATGAGCTGTTTGGGGCC
TGACGCTGATGAGGCAACAGGAGCTTGACGATAAGGTTATGCAGCCTGAT
GAATCGGAGTCGGAGTGATTCGTAGAATTCCTCGACGCGATGAATGGGAA
GATGCGATCGCATAGCGCCAATATCCCAATCCTTATCGCGCGCTTCAACA
GACTAGGTGGTGGGAAATACACGCTATGAGGGTTTATGGTCGCGAACTTG
CAGGATGACTCAGTGCTGGCGCCGGACCCCTGCAATGCGCCATATCGTGT
TTCGACAGTCTTGATGCTGAGTCGGCTGTACGCATGGTCTGAAGTTTTGG
GGTTGGCGCTCCTTCCTCGCTGAGCCATTTCGCAGCGCCTACTTCTCCGA
ACTGGCAACGGTCTAGCAGCATCCCAGAAGCTCTTTTAGACTCTGCTGAC
TCGATTGAAGAGTTTACCTAACAACACTCGCGAGCACCTACATCCTTATC
ACCGATCCTACTCGCACGGTCTTTACCTCATACTTTCTGTTACAGAGGCC
CCCCTAATACATCTACATGGATTACATCATCATTGATTACGTTGACTGCA
GGGGCCAGTCCGAGAAATTCTACCAAGAACCGGTCGGCACCCCAAAGCGC
ATCAAGCCTGTATTCGATATACGTTTCTTCCAGAGCGCGTACTATCTGGA
TGGTGAACTTGCCGGTGCCATCGCAGGCACAATCAAGCTCAATATCACTG
ATCAGCGGACTTTGGTGGTCTGCGGCATTATGGAGCGCGCATACCCTATG
GACACTAGAGCTCCCGCGACCCAATCAACAACGGTTGGAAAGGAGATGGA
CGCGGAGTTGAAGCCGACGTCGGATGAAAAGAAAAAGTACCGCGAAAATC
CACAAGATGAGACGGCTGCAATCGGGGACGATCTCCCTTCTGTTCAAGAT
GCTCAGGCGCCCTCAGGCAGACAAAGTGATACAGATGTTGAAGCGATGCC
ACAACCAGCCTTTCAGGAAGAGAGCAGTGACCAGGGTGAGGGGAGTCGAG
AGAAACCTCGAGTCTACATAGTCCCGCAACTTCGAGCAAAAGACAAGGGA
AGGGGCCGAGCCAAAGGGATTTTGCGGAAGCCAGGTAGTGAGAACGACGA
GCTTGAGAGTGACGATGATCAGCAAGATCGAGCAGACTTCAATGAGCGCA
TGAACCCATTCATCTACACTGGTGATCGACCATATCCCTCAACGACCTGG
GTCTGGGTGTTGGCTGAGCGAAAGGTTGGCCCGTTCTTTCGCTCCTTCCG
CTTTAAGAGACCGATCAACTGGGATGCCGCGCAAAGCCGCTTTATGAATG
GCCTTCTTCTCCTCAGGCTTCCGGTGATTGTGGGGCCTAAGAAACGGGTT
TGTTTCAAGCTCGATGATTAG
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Coding sequence (CDS) from alignment at KZ851921.1:458483..460203-

>M747DRAFT_332609-T1 ID=M747DRAFT_332609-T1|Name=M747DRAFT_332609-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4260bp|location=Sequence derived from alignment at KZ851921.1:458483..460203- (Aspergillus niger ATCC 13496)
GGGCCAGTCCGAGAAATTCTACCAAGAACCGGTCGGCACCCCAAAGCGCA
TCAAGCCTGTATTCGATATACGTTTCTTCCAGAGCGCGTACTATCTGGAT
GGTGAACTTGCCGGTGCCATCGCAGGCACAATCAAGCTCAATATCACTGA
TCAGCGGACTTTGGTGGTCTGCGGCATTATGGAGCGCGCATACCCTATGG
ACACTAGAGCTCCCGCGACCCAATCAACAACGGTTGGAAAGGAGATGGAC
GCGGAGTTGAAGCCGACGTCGGATGAAAAGAAAAAGTACCGCGAAAATCC
ACAAGATGAGACGGCTGCAATCGGGGACGATCTCCCTTCTGTTCAAGATG
CTCAGGCGCCCTCAGGCAGACAAAGTGATACAGATGTTGAAGCGATGCCA
CAACCAGCCTTTCAGGAAGAGAGCAGTGACCAGGGTGAGGGGAGTCGAGA
GAAACCTCGAGTCTACATAGTCCCGCAACTTCGAGCAAAAGACAAGGGAA
GGGGCCGAGCCAAAGGGATTTTGCGGAAGCCAGGTAGTGAGAACGACGAG
CTTGAGAGTGACGATGATCAGCAAGATCGAGCAGACTTCAATGAGCGCAT
GAACCCATTCATCTACACTGGTGATCGACCATATCCCTCAACGACCTGGG
TCTGGGTGTTGGCTGAGCGAAAGGTTGGCCCGTTCTTTCGCTCCTTCCGC
TTTAAGAGACCGATCAACTGGGATGCCGCGCAAAGCCGCTTTATGAATGG
CCTTCTTCTCCTCAGGCTTCCGGTGATTGTGGGGCCTAAGAAACGGGTTT
GTTTCAAGCTCGATGATTAGGATGACTCAGTGCTGGCGCCGGACCCCTGC
AATGCGCCATATCGTGTTTCGACAGTCTTGATGCTGAGTCGGCTGAGTCC
TCATCGAGTGCGATCCGTCCGTGAAAGCCATTATTCTCAAGTACGACGAA
GAAAGACACGACTATATCGTTGAAGACCTCGACGATGACCGTCATCTGGT
CATCAAGGAGAGCCAGCTGCAGAACCTGAAGGCGAGGTTGACAAAGATGC
CTCGTGCCGTCAGAGGGGCCAGTCCGAGAAATTCTACCAAGAACCGGTCG
GCACCCCAAAGCGCATCAAGCCTGTATTCGATATACGTTTCTTCCAGAGC
GCGTACTATCTGGATGGTGAACTTGCCGGTGCCATCGCAGGCACAATCAA
GCTCAATATCACTGATCAGCGGACTTTGGTGGTCTGCGGCATTATGGAGC
GCGCATACCCTATGGACACTAGAGCTCCCGCGACCCAATCAACAACGGTT
GGAAAGGAGATGGACGCGGAGTTGAAGCCGACGTCGGATGAAAAGAAAAA
GTACCGCGAAAATCCACAAGATGAGACGGCTGCAATCGGGGACGATCTCC
CTTCTGTTCAAGATGCTCAGGCGCCCTCAGGCAGACAAAGTGATACAGAT
GTTGAAGCGATGCCACAACCAGCCTTTCAGGAAGAGAGCAGTGACCAGGG
TGAGGGGAGTCGAGAGAAACCTCGAGTCTACATAGTCCCGCAACTTCGAG
CAAAAGACAAGGGAAGGGGCCGAGCCAAAGGGATTTTGCGGAAGCCAGGT
AGTGAGAACGACGAGCTTGAGAGTGACGATGATCAGCAAGATCGAGCAGA
CTTCAATGAGCGCATGAACCCATTCATCTACACTGGTGATCGACCATATC
CCTCAACGACCTGGGTCTGGGTGTTGGCTGAGCGAAAGGTTGGCCCGTTC
TTTCGCTCCTTCCGCTTTAAGAGACCGATCAACTGGGATGCCGCGCAAAG
CCGCTTTATGAATGGCCTTCTTCTCCTCAGGCTTCCGGTGATTGTGGGGC
CTAAGAAACGGGTTTGTTTCAAGCTCGATGATTAGGATGACTCAGTGCTG
GCGCCGGACCCCTGCAATGCGCCATATCGTGTTTCGACAGTCTTGATGCT
GAGTCGGCTGAGTCCTCATCGAGTGCGATCCGTCCGTGAAAGCCATTATT
CTCAAGTACGACGAAGAAAGACACGACTATATCGTTGAAGACCTCGACGA
TGACCGTCATCTGGTCATCAAGGAGAGCCAGCTGCAGAACCTGAAGGCGA
GGTTGACAAAGATGCCTCGTGCCGTCAGAGGGGCCAGTCCGAGAAATTCT
ACCAAGAACCGGTCGGCACCCCAAAGCGCATCAAGCCTGTATTCGATATA
CGTTTCTTCCAGAGCGCGTACTATCTGGATGGTGAACTTGCCGGTGCCAT
CGCAGGCACAATCAAGCTCAATATCACTGATCAGCGGACTTTGGTGGTCT
GCGGCATTATGGAGCGCGCATACCCTATGGACACTAGAGCTCCCGCGACC
CAATCAACAACGGTTGGAAAGGAGATGGACGCGGAGTTGAAGCCGACGTC
GGATGAAAAGAAAAAGTACCGCGAAAATCCACAAGATGAGACGGCTGCAA
TCGGGGACGATCTCCCTTCTGTTCAAGATGCTCAGGCGCCCTCAGGCAGA
CAAAGTGATACAGATGTTGAAGCGATGCCACAACCAGCCTTTCAGGAAGA
GAGCAGTGACCAGGGTGAGGGGAGTCGAGAGAAACCTCGAGTCTACATAG
TCCCGCAACTTCGAGCAAAAGACAAGGGAAGGGGCCGAGCCAAAGGGATT
TTGCGGAAGCCAGGTAGTGAGAACGACGAGCTTGAGAGTGACGATGATCA
GCAAGATCGAGCAGACTTCAATGAGCGCATGAACCCATTCATCTACACTG
GTGATCGACCATATCCCTCAACGACCTGGGTCTGGGTGTTGGCTGAGCGA
AAGGTTGGCCCGTTCTTTCGCTCCTTCCGCTTTAAGAGACCGATCAACTG
GGATGCCGCGCAAAGCCGCTTTATGAATGGCCTTCTTCTCCTCAGGCTTC
CGGTGATTGTGGGGCCTAAGAAACGGGTTTGTTTCAAGCTCGATGATTAG
GATGACTCAGTGCTGGCGCCGGACCCCTGCAATGCGCCATATCGTGTTTC
GACAGTCTTGATGCTGAGTCGGCTGAGTCCTCATCGAGTGCGATCCGTCC
GTGAAAGCCATTATTCTCAAGTACGACGAAGAAAGACACGACTATATCGT
TGAAGACCTCGACGATGACCGTCATCTGGTCATCAAGGAGAGCCAGCTGC
AGAACCTGAAGGCGAGGTTGACAAAGATGCCTCGTGCCGTCAGAGGGGCC
AGTCCGAGAAATTCTACCAAGAACCGGTCGGCACCCCAAAGCGCATCAAG
CCTGTATTCGATATACGTTTCTTCCAGAGCGCGTACTATCTGGATGGTGA
ACTTGCCGGTGCCATCGCAGGCACAATCAAGCTCAATATCACTGATCAGC
GGACTTTGGTGGTCTGCGGCATTATGGAGCGCGCATACCCTATGGACACT
AGAGCTCCCGCGACCCAATCAACAACGGTTGGAAAGGAGATGGACGCGGA
GTTGAAGCCGACGTCGGATGAAAAGAAAAAGTACCGCGAAAATCCACAAG
ATGAGACGGCTGCAATCGGGGACGATCTCCCTTCTGTTCAAGATGCTCAG
GCGCCCTCAGGCAGACAAAGTGATACAGATGTTGAAGCGATGCCACAACC
AGCCTTTCAGGAAGAGAGCAGTGACCAGGGTGAGGGGAGTCGAGAGAAAC
CTCGAGTCTACATAGTCCCGCAACTTCGAGCAAAAGACAAGGGAAGGGGC
CGAGCCAAAGGGATTTTGCGGAAGCCAGGTAGTGAGAACGACGAGCTTGA
GAGTGACGATGATCAGCAAGATCGAGCAGACTTCAATGAGCGCATGAACC
CATTCATCTACACTGGTGATCGACCATATCCCTCAACGACCTGGGTCTGG
GTGTTGGCTGAGCGAAAGGTTGGCCCGTTCTTTCGCTCCTTCCGCTTTAA
GAGACCGATCAACTGGGATGCCGCGCAAAGCCGCTTTATGAATGGCCTTC
TTCTCCTCAGGCTTCCGGTGATTGTGGGGCCTAAGAAACGGGTTTGTTTC
AAGCTCGATGATTAGGATGACTCAGTGCTGGCGCCGGACCCCTGCAATGC
GCCATATCGTGTTTCGACAGTCTTGATGCTGAGTCGGCTGAGTCCTCATC
GAGTGCGATCCGTCCGTGAAAGCCATTATTCTCAAGTACGACGAAGAAAG
ACACGACTATATCGTTGAAGACCTCGACGATGACCGTCATCTGGTCATCA
AGGAGAGCCAGCTGCAGAACCTGAAGGCGAGGTTGACAAAGATGCCTCGT
GCCGTCAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000439transcription factor TFIIH core complex
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_332609M747DRAFT_332609Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332609-T1M747DRAFT_332609-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332609-T1.cdsM747DRAFT_332609-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332609-T1.exon4M747DRAFT_332609-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_332609-T1.exon3M747DRAFT_332609-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_332609-T1.exon2M747DRAFT_332609-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_332609-T1.exon1M747DRAFT_332609-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_332609-T1.utr5p1M747DRAFT_332609-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_8519211.4
DBxrefInterPro:IPR008978
DBxrefInterPro:IPR035935
DBxrefInterPro:IPR009400
DBxrefPFAM:PF06331
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851921.1supercontigKZ851921.1:458483..460203 -
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