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M747DRAFT_333720-T1, M747DRAFT_333720-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_333720-T1
Unique NameM747DRAFT_333720-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851931.1:42964..44237-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_333720-T1 ID=M747DRAFT_333720-T1|Name=M747DRAFT_333720-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1274bp|location=Sequence derived from alignment at KZ851931.1:42964..44237- (Aspergillus niger ATCC 13496)
GTTTCGACGAGACCGACGACTATTCCTCCCCACGCCCGTCGCCATTCTCC
TCGTCTCTTTCCCCCTCTTCCGGATTCAGTTCAACTCCCTGGGTGGGTCT
AATATTCAAAATGGCTAAGGAAAGGACCGAGAAGAAGGACAAGCGCGAGA
AGAAGGAGAAGCGCGCGGAGAAGGACGGCGTCTCCAAGACCAGCAAGAAG
GAGAAGAAGGAGAAGAAGGACAAGGTCGCCCTCGCCGACGCGGTCGAGAA
GGAGCTCACTACTAAGGTTCTCGATGGCATTGACCAGGCTGCCACTGAGG
CTCCTGTCAATGGCGCTGAGGCCGAGCACATGGACGTCGACAGCCGCCCC
GTTGGCGCCATTGTTCCTTTTGCCAGCCCTCTGGTGGAAGACAAGTCTGC
CAAGAAGGTCCTGAAGAGCGTCAAGAAGGGTAAGAAACTTCCTTTTGTAT
TTTCCAGATGTTTGTTAAGAGCGCTCGGTCTGGGTCCTAAGGAGATGGAG
TGTGGATTCGATCCGGTCTCAGCTTCTGGCCCTGAGAGATTACGATTGCC
CCGTTTGGCATTGACTGCGCATCTATCTATCATCGAATGAATATGTGCTA
ATGTATTGACTTCTAATAGCTGCCGTCAACAAGTGCCTGAAGCGCGGTGT
CAAGGAGGTTGTCAAGGCTCTCCGCAAGTCGCCCATCCCCGCTGCCAATG
CCAGCATCGGTGTTCCCAACGGTGTCGTCATTCTCGCCGCCGATATCTCG
CCGATGGACGTTATCTCGCACATCCCTGTCCTGTGCGAGGACCACGGTAT
CCCCTACGTCTTCGTCACATCCCGAGCTGAGCTCGGCAACTCCGCCGCCA
CGAAACGCCCCACCAGTGTTGTGATGGTCGTGCCCAAGTCGGCTTCCAAG
GGCAAGAAGAAGGACGGTGAGGATGATGGAGAGGACTTCACCGAGGTGTT
TGAGGAATTGGCCAAGCTCGCCCAGAAGGAGGCCAAGAAGGTGAACCTGT
GAAGTTTTCAGCTGGACTTCTGAATCCACCTTTCCTTTGCTCTGTTGTTT
TCCTTTCTAATTTATACGGCTTCTTTATATGTCTTGTCACTTTGCTGCTA
TGGCTGTACAGTTCCACTTTGTTGTCTGACAAGGCAGTGCATGTCTTCGG
GGTCTGGCCTTTGGGACGTGTTCATTGGGTTGATCTTTTATGATGTGTCC
GTTGCAAATCCGGCGTTTTCACATGGTGTATGAAAAAAGGCAGGAAGTAT
CCAATAAAAAATCCCAATCTTGAC
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Coding sequence (CDS) from alignment at KZ851931.1:42964..44237-

>M747DRAFT_333720-T1 ID=M747DRAFT_333720-T1|Name=M747DRAFT_333720-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1404bp|location=Sequence derived from alignment at KZ851931.1:42964..44237- (Aspergillus niger ATCC 13496)
CTGCCGTCAACAAGTGCCTGAAGCGCGGTGTCAAGGAGGTTGTCAAGGCT
CTCCGCAAGTCGCCCATCCCCGCTGCCAATGCCAGCATCGGTGTTCCCAA
CGGTGTCGTCATTCTCGCCGCCGATATCTCGCCGATGGACGTTATCTCGC
ACATCCCTGTCCTGTGCGAGGACCACGGTATCCCCTACGTCTTCGTCACA
TCCCGAGCTGAGCTCGGCAACTCCGCCGCCACGAAACGCCCCACCAGTGT
TGTGATGGTCGTGCCCAAGTCGGCTTCCAAGGGCAAGAAGAAGGACGGTG
AGGATGATGGAGAGGACTTCACCGAGGTGTTTGAGGAATTGGCCAAGCTC
GCCCAGAAGGAGGCCAAGAAGGTGAACCTGTGAATGGCTAAGGAAAGGAC
CGAGAAGAAGGACAAGCGCGAGAAGAAGGAGAAGCGCGCGGAGAAGGACG
GCGTCTCCAAGACCAGCAAGAAGGAGAAGAAGGAGAAGAAGGACAAGGTC
GCCCTCGCCGACGCGGTCGAGAAGGAGCTCACTACTAAGGTTCTCGATGG
CATTGACCAGGCTGCCACTGAGGCTCCTGTCAATGGCGCTGAGGCCGAGC
ACATGGACGTCGACAGCCGCCCCGTTGGCGCCATTGTTCCTTTTGCCAGC
CCTCTGGTGGAAGACAAGTCTGCCAAGAAGGTCCTGAAGAGCGTCAAGAA
GGCTGCCGTCAACAAGTGCCTGAAGCGCGGTGTCAAGGAGGTTGTCAAGG
CTCTCCGCAAGTCGCCCATCCCCGCTGCCAATGCCAGCATCGGTGTTCCC
AACGGTGTCGTCATTCTCGCCGCCGATATCTCGCCGATGGACGTTATCTC
GCACATCCCTGTCCTGTGCGAGGACCACGGTATCCCCTACGTCTTCGTCA
CATCCCGAGCTGAGCTCGGCAACTCCGCCGCCACGAAACGCCCCACCAGT
GTTGTGATGGTCGTGCCCAAGTCGGCTTCCAAGGGCAAGAAGAAGGACGG
TGAGGATGATGGAGAGGACTTCACCGAGGTGTTTGAGGAATTGGCCAAGC
TCGCCCAGAAGGAGGCCAAGAAGGTGAACCTGTGAATGGCTAAGGAAAGG
ACCGAGAAGAAGGACAAGCGCGAGAAGAAGGAGAAGCGCGCGGAGAAGGA
CGGCGTCTCCAAGACCAGCAAGAAGGAGAAGAAGGAGAAGAAGGACAAGG
TCGCCCTCGCCGACGCGGTCGAGAAGGAGCTCACTACTAAGGTTCTCGAT
GGCATTGACCAGGCTGCCACTGAGGCTCCTGTCAATGGCGCTGAGGCCGA
GCACATGGACGTCGACAGCCGCCCCGTTGGCGCCATTGTTCCTTTTGCCA
GCCCTCTGGTGGAAGACAAGTCTGCCAAGAAGGTCCTGAAGAGCGTCAAG
AAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:1990904ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_333720M747DRAFT_333720Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333720-T1M747DRAFT_333720-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333720-T1.cdsM747DRAFT_333720-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333720-T1.utr3p1M747DRAFT_333720-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333720-T1.exon2M747DRAFT_333720-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_333720-T1.exon1M747DRAFT_333720-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_333720-T1.utr5p1M747DRAFT_333720-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004037
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR004038
DBxrefPFAM:PF01248
Productsmall nuclear ribonucleo protein complex protein Nhp2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851931.1supercontigKZ851931.1:42964..44237 -
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