You are here

Home

M747DRAFT_334382-T1, M747DRAFT_334382-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_334382-T1
Unique NameM747DRAFT_334382-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851938.1:194852..196117-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_334382-T1 ID=M747DRAFT_334382-T1|Name=M747DRAFT_334382-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1266bp|location=Sequence derived from alignment at KZ851938.1:194852..196117- (Aspergillus niger ATCC 13496)
CCCCACACCCGGCAACAACAACAGGAACATCCCTACTTACGTTCGATTAC
CTATCATTAACCTCCAAAATGTCCGACCCCCAACACCAAATTCGCCACAT
CAACCCCAATTACCTGGAAACATTCATCCAGTCCATCCTCACCAAAAACG
GCGTTTCCACCGACCACGCCAAGATCATATCATCGTGCCTCGTGCAAGCC
GACCTCCGCGGCGTAGACACGCACGGCTCCAACCGCATCCCCTCATACAT
GCAACGTATCCGGCAAAAAGTCCTCTCACCCAGTGCCACCCCCACCTTGA
CTGAGAAAACCCCCGTCGTCGCACAAGTAGACGGCCACAATGCCTTCGGC
TTCGTCTCCGCGCACATGGGCATGCAACGCGCCATTGAAATGGCCAAGGT
ATACGGCATCGGTCTCGTATCCATCAAGCACTCGAACCACTTCGGCATGT
CGGCATGGCTAGTCCAACAGGCCCTGGACGCAGGGATGATGTCCCTCGTG
TTCACGAATTCCTCGCCCGCCCTACCCGTCTGGGGCGGTAAATCTAAGCT
CATGGGCGTGTCTCCGATCGCGTGCGGTGCTCCGGCTGGATCGGCTCCGC
CGTTTATTCTGGATATGGCGCCGTCCATCGCCGCCCGGGGAAAGATCTAT
AAGGCGCTTCGCCGCGGAGAGAAAATCCCGACTGATTGGGCGCTTGATGG
GGAGGGCAATATCACAGATGATCCTGCTAAGGCACTTCAGGGTGTGATGC
TCCCCATGGGTGGGCCGAAGGGGTCTGCGCTGGCGATCATGATGGATGTG
TTTTCTGGGGTGTTGTCCGGGTCTGCGTTTGCTGGGGAAGTGACGGGCCC
GTATGATCCGTCTAAGCCGGCGGATGTGGGGCATTTCTTGGTGGCGATTA
AGCCGGATTTGTTTATGGGGTTGGAGGAGTTTAAGGAGAGGATGGATTAT
TTGTATCAGAAGGTCGTGGGGAGTGACAAGATGGCGGGTGTGGAGAGAAT
TTATTATCCCGGGGAGATTGAGCAGATTACGAGGGAGACGAGGTTGAAGG
AGGGCATTCCGTTTACGGAAGCAGAGATTGAGGCGTTGAATAAGGAGGCG
GAGATGGTAGGTGCGGAGAAGTTGAGGGTTGATTAGGATTATTGGTGATG
TATTGGGAATTGATGGCCAGATGAGTACAGGCCGGGTGTAGGTTTGAAGA
ATACATGTTTACATGATATCATTGTACAATGGAATCCTACTATATGAAGT
ATAGTCACACCTTGAG
back to top

Coding sequence (CDS) from alignment at KZ851938.1:194852..196117-

>M747DRAFT_334382-T1 ID=M747DRAFT_334382-T1|Name=M747DRAFT_334382-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1068bp|location=Sequence derived from alignment at KZ851938.1:194852..196117- (Aspergillus niger ATCC 13496)
ATGTCCGACCCCCAACACCAAATTCGCCACATCAACCCCAATTACCTGGA
AACATTCATCCAGTCCATCCTCACCAAAAACGGCGTTTCCACCGACCACG
CCAAGATCATATCATCGTGCCTCGTGCAAGCCGACCTCCGCGGCGTAGAC
ACGCACGGCTCCAACCGCATCCCCTCATACATGCAACGTATCCGGCAAAA
AGTCCTCTCACCCAGTGCCACCCCCACCTTGACTGAGAAAACCCCCGTCG
TCGCACAAGTAGACGGCCACAATGCCTTCGGCTTCGTCTCCGCGCACATG
GGCATGCAACGCGCCATTGAAATGGCCAAGGTATACGGCATCGGTCTCGT
ATCCATCAAGCACTCGAACCACTTCGGCATGTCGGCATGGCTAGTCCAAC
AGGCCCTGGACGCAGGGATGATGTCCCTCGTGTTCACGAATTCCTCGCCC
GCCCTACCCGTCTGGGGCGGTAAATCTAAGCTCATGGGCGTGTCTCCGAT
CGCGTGCGGTGCTCCGGCTGGATCGGCTCCGCCGTTTATTCTGGATATGG
CGCCGTCCATCGCCGCCCGGGGAAAGATCTATAAGGCGCTTCGCCGCGGA
GAGAAAATCCCGACTGATTGGGCGCTTGATGGGGAGGGCAATATCACAGA
TGATCCTGCTAAGGCACTTCAGGGTGTGATGCTCCCCATGGGTGGGCCGA
AGGGGTCTGCGCTGGCGATCATGATGGATGTGTTTTCTGGGGTGTTGTCC
GGGTCTGCGTTTGCTGGGGAAGTGACGGGCCCGTATGATCCGTCTAAGCC
GGCGGATGTGGGGCATTTCTTGGTGGCGATTAAGCCGGATTTGTTTATGG
GGTTGGAGGAGTTTAAGGAGAGGATGGATTATTTGTATCAGAAGGTCGTG
GGGAGTGACAAGATGGCGGGTGTGGAGAGAATTTATTATCCCGGGGAGAT
TGAGCAGATTACGAGGGAGACGAGGTTGAAGGAGGGCATTCCGTTTACGG
AAGCAGAGATTGAGGCGTTGAATAAGGAGGCGGAGATGGTAGGTGCGGAG
AAGTTGAGGGTTGATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_334382M747DRAFT_334382Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334382-T1.cdsM747DRAFT_334382-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334382-T1.utr3p1M747DRAFT_334382-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334382-T1.exon1M747DRAFT_334382-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334382-T1.utr5p1M747DRAFT_334382-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_334382-T1M747DRAFT_334382-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519381.1
NoteEggNog:ENOG41
DBxrefInterPro:IPR036111
DBxrefInterPro:IPR003767
DBxrefPFAM:PF02615
ProductMalate/L-lactate dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851938.1supercontigKZ851938.1:194852..196117 -
Powered by Drupal