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M747DRAFT_335972-T1, M747DRAFT_335972-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_335972-T1
Unique NameM747DRAFT_335972-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851972.1:52710..53860+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_335972-T1 ID=M747DRAFT_335972-T1|Name=M747DRAFT_335972-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1151bp|location=Sequence derived from alignment at KZ851972.1:52710..53860+ (Aspergillus niger ATCC 13496)
AGGAAGAAAAGCCCGTCGCAACAGTTTATCGTCTCGTCCCCAACCCGGCC
CGGTCGCGGTGCTGCCATTGTCTTCATTGCTGTCATATTCGATTGGTGTT
TCATCCCAATTTTGTTCAACTTAATCCGCCACCATGTCTGACTACGGAGA
CCACGACGCTGAGGAAACGTAAGAGACCGGTACCCCATGAGAGCTTGAGC
TTGCGCAGGTCAATGCTGCGCGTCTGCGTTACATATCGATGGCCGTCATT
TTTGCTAGGTGGAAATTCCGATGTTCTGACTAGGATTGTCTTATAGTTAC
GACTACGAGCCGGAGCAGGAGTACGATGACAACGAGCCCGAGGACTTCTT
AAACCCCGAGGATGTCGACGTCGCAGAAGGAGGAGCCGATGAATATGGCG
AAGGCTCATACGCGCCTGCTGTCAACGGAAACCACATTGTCGCTTCAGGC
GACCCGAATGCGGGGTATGCGGGCAAGGTCATGGAACAGACACGGGAGAA
GAAGGTCCCGAACGACCAGCGCCAGACAACTCCATACATGACCAAGTACG
AGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGCAGATCAGGTTCGTCTCG
GCAATCGATGCAGCATCAAGCATGGGCTGAGGAGCGCAATCGGATGCTGA
CCATGTTTTTAGTATGAACGCCCCGGTGCTCGTCGATCTTGAGGGCGAGA
CGGATCCTCTACAGATCGCCATCAAGGAGTTGAACCAGAAGAAGATCCCA
CTGATTGTGCGGAGATATCTTCCCGACGGATGGTAAGCGGACCTTCTCCA
TGTGTGTTTAACGATTTGACGTATTCGATCTAATCACTATTTCTGTGGTA
CAGGTACGAGGACTGGACTTGCGAAGAATTACTCTAGACGCGGAGACGAC
ATAGGTGGTTGTATTTTTCCAAATGGCTTCTTCTTACTTTATTGTGTATG
TGTTTGGTCTAAGGATCTTTCCCTCTGGGCAGCATAGCGTTTGGAGTTTC
GGAGTAGGGTAGCGGGCCATACTGGCCTAGGCAGCCACTGGGACACTGGG
AAGACAAAGAAAACTCAAAAGAATAACGCACTGCAGTCTATATATCAGTA
AAATTCAAAAAAGTTTGATGTTGACATTGTTTCGTTTGGCACAGTCTAGG
C
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Coding sequence (CDS) from alignment at KZ851972.1:52710..53860+

>M747DRAFT_335972-T1 ID=M747DRAFT_335972-T1|Name=M747DRAFT_335972-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1932bp|location=Sequence derived from alignment at KZ851972.1:52710..53860+ (Aspergillus niger ATCC 13496)
ATGTCTGACTACGGAGACCACGACGCTGAGGAAACTTACGACTACGAGCC
GGAGCAGGAGTACGATGACAACGAGCCCGAGGACTTCTTAAACCCCGAGG
ATGTCGACGTCGCAGAAGGAGGAGCCGATGAATATGGCGAAGGCTCATAC
GCGCCTGCTGTCAACGGAAACCACATTGTCGCTTCAGGCGACCCGAATGC
GGGGTATGCGGGCAAGGTCATGGAACAGACACGGGAGAAGAAGGTCCCGA
ACGACCAGCGCCAGACAACTCCATACATGACCAAGTACGAGCGCGCGCGT
GTCCTGGGTACTCGGGCGCTGCAGATCAGTATGAACGCCCCGGTGCTCGT
CGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGA
ACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGG
TACGAGGACTGGACTTGCGAAGAATTACTCTAGATGTCTGACTACGGAGA
CCACGACGCTGAGGAAACTTACGACTACGAGCCGGAGCAGGAGTACGATG
ACAACGAGCCCGAGGACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAA
GGAGGAGCCGATGAATATGGCGAAGGCTCATACGCGCCTGCTGTCAACGG
AAACCACATTGTCGCTTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGG
TCATGGAACAGACACGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACA
ACTCCATACATGACCAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGC
GCTGCAGATCAGTATGAACGCCCCGGTGCTCGTCGATCTTGAGGGCGAGA
CGGATCCTCTACAGATCGCCATCAAGGAGTTGAACCAGAAGAAGATCCCA
CTGATTGTGCGGAGATATCTTCCCGACGGATGGTACGAGGACTGGACTTG
CGAAGAATTACTCTAGATGTCTGACTACGGAGACCACGACGCTGAGGAAA
CTTACGACTACGAGCCGGAGCAGGAGTACGATGACAACGAGCCCGAGGAC
TTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGGAGCCGATGAATA
TGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACCACATTGTCGCTT
CAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATGGAACAGACACGG
GAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCCATACATGACCAA
GTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGCAGATCAGTATGA
ACGCCCCGGTGCTCGTCGATCTTGAGGGCGAGACGGATCCTCTACAGATC
GCCATCAAGGAGTTGAACCAGAAGAAGATCCCACTGATTGTGCGGAGATA
TCTTCCCGACGGATGGTACGAGGACTGGACTTGCGAAGAATTACTCTAGA
TGTCTGACTACGGAGACCACGACGCTGAGGAAACTTACGACTACGAGCCG
GAGCAGGAGTACGATGACAACGAGCCCGAGGACTTCTTAAACCCCGAGGA
TGTCGACGTCGCAGAAGGAGGAGCCGATGAATATGGCGAAGGCTCATACG
CGCCTGCTGTCAACGGAAACCACATTGTCGCTTCAGGCGACCCGAATGCG
GGGTATGCGGGCAAGGTCATGGAACAGACACGGGAGAAGAAGGTCCCGAA
CGACCAGCGCCAGACAACTCCATACATGACCAAGTACGAGCGCGCGCGTG
TCCTGGGTACTCGGGCGCTGCAGATCAGTATGAACGCCCCGGTGCTCGTC
GATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGAA
CCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGGT
ACGAGGACTGGACTTGCGAAGAATTACTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPO26M747DRAFT_335972Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335972-T1M747DRAFT_335972-T1-proteinAspergillus niger ATCC 13496polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335972-T1.utr5p1M747DRAFT_335972-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335972-T1.exon1M747DRAFT_335972-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_335972-T1.exon2M747DRAFT_335972-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_335972-T1.exon3M747DRAFT_335972-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_335972-T1.exon4M747DRAFT_335972-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335972-T1.cdsM747DRAFT_335972-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_335972-T1.utr3p1M747DRAFT_335972-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265552
DBxrefInterPro:IPR036161
DBxrefInterPro:IPR006111
DBxrefInterPro:IPR020708
DBxrefInterPro:IPR012293
DBxrefInterPro:IPR006110
DBxrefPFAM:PF01192
Product and III
Product II
Productsubunit common to RNA polymerases I
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851972.1supercontigKZ851972.1:52710..53860 +
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