You are here

Home

M747DRAFT_339718-T1, M747DRAFT_339718-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_339718-T1
Unique NameM747DRAFT_339718-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851908.1:200762..202432+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_339718-T1 ID=M747DRAFT_339718-T1|Name=M747DRAFT_339718-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1671bp|location=Sequence derived from alignment at KZ851908.1:200762..202432+ (Aspergillus niger ATCC 13496)
ATGCTCCTCGACACTCCGGGATCATCCGAAATCACAACACCCCCAGCATC
CACCCGCAAGAGAGCTGGGGGAAGAAGGTCCAAGACTGGATGTCGTACCT
GTCGGTGAGTTCAGCCTGCACGACACTACCATAGATACTCTGCTAACAAA
CCCGCGCTCTTTAGTGCCCGCCATAAGAAATGCGATGAAACCCCAGGCGC
CTGCATCAATTGTACATCTACGGGTCGAACCTGCGATGGATATGAGCTCC
ACCGCTTACCCCGCGAGGTGAGGAGACCCGGAAAAGCAGTGGTGGGGATA
ACAGTGCCCGCCTCACTCGCGAATGGGATCCACTGGGTGATGAATTCCGA
CGAGCAACGAGCGTTCGCCTATTTTCAGCATCGATCCATGCCCGCGTTTT
TAGGATGGTTTGACTCGTCGCTATGGCAGAAACTGGTCCTCCAGTTGAGT
CATGCAGAGCCCGCTGTATACCACGCAGCTATCGCATTGAGCGCCATCCA
CCAGGATGCCGAGAAGAAAGGCATGCCGCTTGCTAGGGAGGACTTGGACA
ATACTTGGCATCGCTTCGCTTTGGAACAGGCGGGACGCTCCATCGTCTTG
CTCAATGCGCGACGGACATCGCAGGATCCCCGTCTGAGAGAGGTCACTCT
GCTGTGCTGCTTGCTTTTCACGTTGTCTGAATTGCTGCGCGGTCGGTACG
ATAACGCTTTTAGACATCTGCATGGTGGTATACACATCTTGAAAAATCTA
GGCGCCCATAGACAGCTTGATTCGGTGGCAATGTCTAAGCCTCCGGTCGA
GTGGTGTCTTGTCGAGGCATTTGCGCACTTGGACGTCCAGTCTACCCAGT
TCGGCGTAGGAGGACCGATCTGGTTTACCGGTAAGCAGGACCATATCCAG
CTAGGGAATGGGAAGTCCTCCGTTTTTCATTTTCATACTCTTGCAGAGGC
GCGTCGAGCTTTCGATCGCGTGATGGGCACTGTTCTTGAGTTCACAGCAA
AGGCATGGGGCTCAACCCACAGTCAGATCGCATCGGACTACGAAACACTA
TACAAGGAGCAGCTCGAACTCTGTCTACAGATAGACACATTTGCACGAGC
ATTCGATACATTTCGAACCGACGCATACCCTCAGATGAGCCCGAAAGAGC
GACGAGGAGCCGACGTTGTCCACCTTCACCAGCGAGCCGCAACCCTCACC
CTCCAAACCTGCCTTTTAGACGGAAACGAGCCGGTACTTGATCAGTACAC
GCCCGAATTCGAAAATATCCTATCTTTAGCGGCTGCAATCATGCACACAT
TCCCAGAGCGCCCGAGTGTTTGCTTTGACATGGGCATCATTCCACCTCTG
ACTCTCGTGGCGACAGGCTGCCGTGATTACAATGTTCGGTGGCGCGCAAT
TGAGATGCTTTGTTCTTGGCCTCATCGCGAGGGGACCTGGGATTCCAACT
TGTGTGCGCAGCTGGCGGTTCATACTATGAAAGTGGAGGCATTGAATAAA
TTCAATGTGGATGCGAGTGGAACACCGGCCGATGTTCACAATGAGCCATC
CTTGCGAGGTATATTCATGACAGTCGAAGAGGATCAGCGCCAGGCGCGTA
TTTCGTACTTTCTTGGAGATGTAAAGCACGAACTCCGGGTTATGCTGGAG
GAGGATATACATCCCTTTTAG
back to top

Coding sequence (CDS) from alignment at KZ851908.1:200762..202432+

>M747DRAFT_339718-T1 ID=M747DRAFT_339718-T1|Name=M747DRAFT_339718-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3222bp|location=Sequence derived from alignment at KZ851908.1:200762..202432+ (Aspergillus niger ATCC 13496)
ATGCTCCTCGACACTCCGGGATCATCCGAAATCACAACACCCCCAGCATC
CACCCGCAAGAGAGCTGGGGGAAGAAGGTCCAAGACTGGATGTCGTACCT
GTCGTGCCCGCCATAAGAAATGCGATGAAACCCCAGGCGCCTGCATCAAT
TGTACATCTACGGGTCGAACCTGCGATGGATATGAGCTCCACCGCTTACC
CCGCGAGGTGAGGAGACCCGGAAAAGCAGTGGTGGGGATAACAGTGCCCG
CCTCACTCGCGAATGGGATCCACTGGGTGATGAATTCCGACGAGCAACGA
GCGTTCGCCTATTTTCAGCATCGATCCATGCCCGCGTTTTTAGGATGGTT
TGACTCGTCGCTATGGCAGAAACTGGTCCTCCAGTTGAGTCATGCAGAGC
CCGCTGTATACCACGCAGCTATCGCATTGAGCGCCATCCACCAGGATGCC
GAGAAGAAAGGCATGCCGCTTGCTAGGGAGGACTTGGACAATACTTGGCA
TCGCTTCGCTTTGGAACAGGCGGGACGCTCCATCGTCTTGCTCAATGCGC
GACGGACATCGCAGGATCCCCGTCTGAGAGAGGTCACTCTGCTGTGCTGC
TTGCTTTTCACGTTGTCTGAATTGCTGCGCGGTCGGTACGATAACGCTTT
TAGACATCTGCATGGTGGTATACACATCTTGAAAAATCTAGGCGCCCATA
GACAGCTTGATTCGGTGGCAATGTCTAAGCCTCCGGTCGAGTGGTGTCTT
GTCGAGGCATTTGCGCACTTGGACGTCCAGTCTACCCAGTTCGGCGTAGG
AGGACCGATCTGGTTTACCGGTAAGCAGGACCATATCCAGCTAGGGAATG
GGAAGTCCTCCGTTTTTCATTTTCATACTCTTGCAGAGGCGCGTCGAGCT
TTCGATCGCGTGATGGGCACTGTTCTTGAGTTCACAGCAAAGGCATGGGG
CTCAACCCACAGTCAGATCGCATCGGACTACGAAACACTATACAAGGAGC
AGCTCGAACTCTGTCTACAGATAGACACATTTGCACGAGCATTCGATACA
TTTCGAACCGACGCATACCCTCAGATGAGCCCGAAAGAGCGACGAGGAGC
CGACGTTGTCCACCTTCACCAGCGAGCCGCAACCCTCACCCTCCAAACCT
GCCTTTTAGACGGAAACGAGCCGGTACTTGATCAGTACACGCCCGAATTC
GAAAATATCCTATCTTTAGCGGCTGCAATCATGCACACATTCCCAGAGCG
CCCGAGTGTTTGCTTTGACATGGGCATCATTCCACCTCTGACTCTCGTGG
CGACAGGCTGCCGTGATTACAATGTTCGGTGGCGCGCAATTGAGATGCTT
TGTTCTTGGCCTCATCGCGAGGGGACCTGGGATTCCAACTTGTGTGCGCA
GCTGGCGGTTCATACTATGAAAGTGGAGGCATTGAATAAATTCAATGTGG
ATGCGAGTGGAACACCGGCCGATGTTCACAATGAGCCATCCTTGCGAGGT
ATATTCATGACAGTCGAAGAGGATCAGCGCCAGGCGCGTATTTCGTACTT
TCTTGGAGATGTAAAGCACGAACTCCGGGTTATGCTGGAGGAGGATATAC
ATCCCTTTTAGATGCTCCTCGACACTCCGGGATCATCCGAAATCACAACA
CCCCCAGCATCCACCCGCAAGAGAGCTGGGGGAAGAAGGTCCAAGACTGG
ATGTCGTACCTGTCGTGCCCGCCATAAGAAATGCGATGAAACCCCAGGCG
CCTGCATCAATTGTACATCTACGGGTCGAACCTGCGATGGATATGAGCTC
CACCGCTTACCCCGCGAGGTGAGGAGACCCGGAAAAGCAGTGGTGGGGAT
AACAGTGCCCGCCTCACTCGCGAATGGGATCCACTGGGTGATGAATTCCG
ACGAGCAACGAGCGTTCGCCTATTTTCAGCATCGATCCATGCCCGCGTTT
TTAGGATGGTTTGACTCGTCGCTATGGCAGAAACTGGTCCTCCAGTTGAG
TCATGCAGAGCCCGCTGTATACCACGCAGCTATCGCATTGAGCGCCATCC
ACCAGGATGCCGAGAAGAAAGGCATGCCGCTTGCTAGGGAGGACTTGGAC
AATACTTGGCATCGCTTCGCTTTGGAACAGGCGGGACGCTCCATCGTCTT
GCTCAATGCGCGACGGACATCGCAGGATCCCCGTCTGAGAGAGGTCACTC
TGCTGTGCTGCTTGCTTTTCACGTTGTCTGAATTGCTGCGCGGTCGGTAC
GATAACGCTTTTAGACATCTGCATGGTGGTATACACATCTTGAAAAATCT
AGGCGCCCATAGACAGCTTGATTCGGTGGCAATGTCTAAGCCTCCGGTCG
AGTGGTGTCTTGTCGAGGCATTTGCGCACTTGGACGTCCAGTCTACCCAG
TTCGGCGTAGGAGGACCGATCTGGTTTACCGGTAAGCAGGACCATATCCA
GCTAGGGAATGGGAAGTCCTCCGTTTTTCATTTTCATACTCTTGCAGAGG
CGCGTCGAGCTTTCGATCGCGTGATGGGCACTGTTCTTGAGTTCACAGCA
AAGGCATGGGGCTCAACCCACAGTCAGATCGCATCGGACTACGAAACACT
ATACAAGGAGCAGCTCGAACTCTGTCTACAGATAGACACATTTGCACGAG
CATTCGATACATTTCGAACCGACGCATACCCTCAGATGAGCCCGAAAGAG
CGACGAGGAGCCGACGTTGTCCACCTTCACCAGCGAGCCGCAACCCTCAC
CCTCCAAACCTGCCTTTTAGACGGAAACGAGCCGGTACTTGATCAGTACA
CGCCCGAATTCGAAAATATCCTATCTTTAGCGGCTGCAATCATGCACACA
TTCCCAGAGCGCCCGAGTGTTTGCTTTGACATGGGCATCATTCCACCTCT
GACTCTCGTGGCGACAGGCTGCCGTGATTACAATGTTCGGTGGCGCGCAA
TTGAGATGCTTTGTTCTTGGCCTCATCGCGAGGGGACCTGGGATTCCAAC
TTGTGTGCGCAGCTGGCGGTTCATACTATGAAAGTGGAGGCATTGAATAA
ATTCAATGTGGATGCGAGTGGAACACCGGCCGATGTTCACAATGAGCCAT
CCTTGCGAGGTATATTCATGACAGTCGAAGAGGATCAGCGCCAGGCGCGT
ATTTCGTACTTTCTTGGAGATGTAAAGCACGAACTCCGGGTTATGCTGGA
GGAGGATATACATCCCTTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_339718M747DRAFT_339718Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_339718-T1.exon1M747DRAFT_339718-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_339718-T1.exon2M747DRAFT_339718-T1.exon2Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_339718-T1.cdsM747DRAFT_339718-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_339718-T1M747DRAFT_339718-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
ProductC6 zinc finger domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851908.1supercontigKZ851908.1:200762..202432 +
Powered by Drupal