You are here

Home

M747DRAFT_340492-T1, M747DRAFT_340492-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_340492-T1
Unique NameM747DRAFT_340492-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851910.1:748237..749138+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_340492-T1 ID=M747DRAFT_340492-T1|Name=M747DRAFT_340492-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=902bp|location=Sequence derived from alignment at KZ851910.1:748237..749138+ (Aspergillus niger ATCC 13496)
ATGTTATCTACTGCCGATTTCTGGTTCCCGTTATCAGCCCACCCGCTGTC
ACTCGACCGGATTGCTCGTATAGAGGGGTGCGGGGGTGCAGCCAGCCCCC
GATGCAACATCCATGCTATGACGAATGGGGCCCTGAGCTGACCTGCATGT
AGAAAGTTGGTGATCATCGGGGATGGTGCCTGTGGGAAGACCAGTCTGCT
GAGCGTCTTCACCCTGGGCTATTTTCCAACCGTAAGTCAACCCTCTTCTC
CAATGCGCTGATCGATGGAGTTTCATTGGCTAACCGGTTTCTGATCTGTA
GCACTATGTTCGTACCTATCACCTCCTTCGCTGACTACCTAGCATGCATC
TGACTGTCGCCTATCAATCAGGTTCCGACGGTATTCGAAAACTATGTGAC
GGATTGCCGAGTGGATGGCCGTTCGGTTCAATTGGCACTATGGGATACTG
CTGGTCAGGAAGATTACGAACGATTGCGTCCACTCGCCTATTCCAAGGCG
CATGTGATCCTCATTGGGTTCTCCGTGGACACGCCCGATTCGCTCGAGAA
CGTCAAACACAAGGTTGTCTGACCATCTAGTCACTGTTGGACTACGCTGA
CTGGTTGCTTATAGTGGATTGAAGAAGCGAACGAACGATGTCCGGGTGTC
CCCATCATCCTTGTCGGGTTGAAGAAAGATCTGCGGGAAGATCCTCTGGC
CGTCGAGGAGATGAGAAAGAAGTCGCTAAAGTTCGTGACGCCCAAAGAAG
GAAGCGATATTTCAACGCAGATCGGAGCCCGCAAGTATCTCGAATGTTCC
TCGTTAACCGGCGAGGGCGTCGACGATGTATTCGAGGCGGCCACGCGTGC
CGCGCTTCTGACGTTCGACAAGCGAAAAAGCTCCTGTTGCATTGTGCTAT
AA
back to top

Coding sequence (CDS) from alignment at KZ851910.1:748237..749138+

>M747DRAFT_340492-T1 ID=M747DRAFT_340492-T1|Name=M747DRAFT_340492-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3210bp|location=Sequence derived from alignment at KZ851910.1:748237..749138+ (Aspergillus niger ATCC 13496)
ATGTTATCTACTGCCGATTTCTGGTTCCCGTTATCAGCCCACCCGCTGTC
ACTCGACCGGATTGCTCGTATAGAGGGAAAGTTGGTGATCATCGGGGATG
GTGCCTGTGGGAAGACCAGTCTGCTGAGCGTCTTCACCCTGGGCTATTTT
CCAACCCACTATGTTCCGACGGTATTCGAAAACTATGTGACGGATTGCCG
AGTGGATGGCCGTTCGGTTCAATTGGCACTATGGGATACTGCTGGTCAGG
AAGATTACGAACGATTGCGTCCACTCGCCTATTCCAAGGCGCATGTGATC
CTCATTGGGTTCTCCGTGGACACGCCCGATTCGCTCGAGAACGTCAAACA
CAAGTGGATTGAAGAAGCGAACGAACGATGTCCGGGTGTCCCCATCATCC
TTGTCGGGTTGAAGAAAGATCTGCGGGAAGATCCTCTGGCCGTCGAGGAG
ATGAGAAAGAAGTCGCTAAAGTTCGTGACGCCCAAAGAAGGAAGCGATAT
TTCAACGCAGATCGGAGCCCGCAAGTATCTCGAATGTTCCTCGTTAACCG
GCGAGGGCGTCGACGATGTATTCGAGGCGGCCACGCGTGCCGCGCTTCTG
ACGTTCGACAAGCGAAAAAGCTCCTGTTGCATTGTGCTATAAATGTTATC
TACTGCCGATTTCTGGTTCCCGTTATCAGCCCACCCGCTGTCACTCGACC
GGATTGCTCGTATAGAGGGAAAGTTGGTGATCATCGGGGATGGTGCCTGT
GGGAAGACCAGTCTGCTGAGCGTCTTCACCCTGGGCTATTTTCCAACCCA
CTATGTTCCGACGGTATTCGAAAACTATGTGACGGATTGCCGAGTGGATG
GCCGTTCGGTTCAATTGGCACTATGGGATACTGCTGGTCAGGAAGATTAC
GAACGATTGCGTCCACTCGCCTATTCCAAGGCGCATGTGATCCTCATTGG
GTTCTCCGTGGACACGCCCGATTCGCTCGAGAACGTCAAACACAAGTGGA
TTGAAGAAGCGAACGAACGATGTCCGGGTGTCCCCATCATCCTTGTCGGG
TTGAAGAAAGATCTGCGGGAAGATCCTCTGGCCGTCGAGGAGATGAGAAA
GAAGTCGCTAAAGTTCGTGACGCCCAAAGAAGGAAGCGATATTTCAACGC
AGATCGGAGCCCGCAAGTATCTCGAATGTTCCTCGTTAACCGGCGAGGGC
GTCGACGATGTATTCGAGGCGGCCACGCGTGCCGCGCTTCTGACGTTCGA
CAAGCGAAAAAGCTCCTGTTGCATTGTGCTATAAATGTTATCTACTGCCG
ATTTCTGGTTCCCGTTATCAGCCCACCCGCTGTCACTCGACCGGATTGCT
CGTATAGAGGGAAAGTTGGTGATCATCGGGGATGGTGCCTGTGGGAAGAC
CAGTCTGCTGAGCGTCTTCACCCTGGGCTATTTTCCAACCCACTATGTTC
CGACGGTATTCGAAAACTATGTGACGGATTGCCGAGTGGATGGCCGTTCG
GTTCAATTGGCACTATGGGATACTGCTGGTCAGGAAGATTACGAACGATT
GCGTCCACTCGCCTATTCCAAGGCGCATGTGATCCTCATTGGGTTCTCCG
TGGACACGCCCGATTCGCTCGAGAACGTCAAACACAAGTGGATTGAAGAA
GCGAACGAACGATGTCCGGGTGTCCCCATCATCCTTGTCGGGTTGAAGAA
AGATCTGCGGGAAGATCCTCTGGCCGTCGAGGAGATGAGAAAGAAGTCGC
TAAAGTTCGTGACGCCCAAAGAAGGAAGCGATATTTCAACGCAGATCGGA
GCCCGCAAGTATCTCGAATGTTCCTCGTTAACCGGCGAGGGCGTCGACGA
TGTATTCGAGGCGGCCACGCGTGCCGCGCTTCTGACGTTCGACAAGCGAA
AAAGCTCCTGTTGCATTGTGCTATAAATGTTATCTACTGCCGATTTCTGG
TTCCCGTTATCAGCCCACCCGCTGTCACTCGACCGGATTGCTCGTATAGA
GGGAAAGTTGGTGATCATCGGGGATGGTGCCTGTGGGAAGACCAGTCTGC
TGAGCGTCTTCACCCTGGGCTATTTTCCAACCCACTATGTTCCGACGGTA
TTCGAAAACTATGTGACGGATTGCCGAGTGGATGGCCGTTCGGTTCAATT
GGCACTATGGGATACTGCTGGTCAGGAAGATTACGAACGATTGCGTCCAC
TCGCCTATTCCAAGGCGCATGTGATCCTCATTGGGTTCTCCGTGGACACG
CCCGATTCGCTCGAGAACGTCAAACACAAGTGGATTGAAGAAGCGAACGA
ACGATGTCCGGGTGTCCCCATCATCCTTGTCGGGTTGAAGAAAGATCTGC
GGGAAGATCCTCTGGCCGTCGAGGAGATGAGAAAGAAGTCGCTAAAGTTC
GTGACGCCCAAAGAAGGAAGCGATATTTCAACGCAGATCGGAGCCCGCAA
GTATCTCGAATGTTCCTCGTTAACCGGCGAGGGCGTCGACGATGTATTCG
AGGCGGCCACGCGTGCCGCGCTTCTGACGTTCGACAAGCGAAAAAGCTCC
TGTTGCATTGTGCTATAAATGTTATCTACTGCCGATTTCTGGTTCCCGTT
ATCAGCCCACCCGCTGTCACTCGACCGGATTGCTCGTATAGAGGGAAAGT
TGGTGATCATCGGGGATGGTGCCTGTGGGAAGACCAGTCTGCTGAGCGTC
TTCACCCTGGGCTATTTTCCAACCCACTATGTTCCGACGGTATTCGAAAA
CTATGTGACGGATTGCCGAGTGGATGGCCGTTCGGTTCAATTGGCACTAT
GGGATACTGCTGGTCAGGAAGATTACGAACGATTGCGTCCACTCGCCTAT
TCCAAGGCGCATGTGATCCTCATTGGGTTCTCCGTGGACACGCCCGATTC
GCTCGAGAACGTCAAACACAAGTGGATTGAAGAAGCGAACGAACGATGTC
CGGGTGTCCCCATCATCCTTGTCGGGTTGAAGAAAGATCTGCGGGAAGAT
CCTCTGGCCGTCGAGGAGATGAGAAAGAAGTCGCTAAAGTTCGTGACGCC
CAAAGAAGGAAGCGATATTTCAACGCAGATCGGAGCCCGCAAGTATCTCG
AATGTTCCTCGTTAACCGGCGAGGGCGTCGACGATGTATTCGAGGCGGCC
ACGCGTGCCGCGCTTCTGACGTTCGACAAGCGAAAAAGCTCCTGTTGCAT
TGTGCTATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RHO2M747DRAFT_340492Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_340492-T1M747DRAFT_340492-T1-proteinAspergillus niger ATCC 13496polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_340492-T1.exon1M747DRAFT_340492-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_340492-T1.exon2M747DRAFT_340492-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_340492-T1.exon3M747DRAFT_340492-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_340492-T1.exon4M747DRAFT_340492-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_340492-T1.exon5M747DRAFT_340492-T1.exon5Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_340492-T1.cdsM747DRAFT_340492-T1.cdsAspergillus niger ATCC 13496CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductRho GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851910.1supercontigKZ851910.1:748237..749138 +
Powered by Drupal