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M747DRAFT_341490-T1, M747DRAFT_341490-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_341490-T1
Unique NameM747DRAFT_341490-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:599147..600007+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_341490-T1 ID=M747DRAFT_341490-T1|Name=M747DRAFT_341490-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=861bp|location=Sequence derived from alignment at KZ851914.1:599147..600007+ (Aspergillus niger ATCC 13496)
ATGTCTGCCAATCGAGCAAGGCGTATCGCCAAAGAGATCGCCGACATCCA
CGCCGACACACAGTCGCAAATCACGGCTGAACCACTGCACGGTGGGGAGG
ATCTTACACATCTTCGAGGCACGTTCCCAGGGCCTCCAGGAACACCCTAT
GAAGGTGGAACCTATACCATCGACATTAAAATCCCCAACGATTATCCATT
TCGGCCTCCCCACATGAAGTTTGTAACCAAGGTCTGGCATCCCAACGTCA
GCAGTCAAACAGTAAGTCACCTCCAGTCATGTATGATCAGGCTGTCTCTA
GTTTCCTGCTAATAAAGCTGATTGCCCAGGGTGCCATCTGCCTAGACACT
CTTTCCACTGCGTGGTCGCCGGTGCTCACCATCAAGTCTGCCCTTCTGTC
ACTGCAATCCCTGCTAAGCACACCCGAGCCCAAAGATCCTCAAGATGCCG
AGGTCGCCACGATGCTCCTTCGGAGACCGCAGGAATTTGCACGAGTTGCT
CAGGAGTGGGCTGTGATGTATGCAGGAGCTCCCAGAAGGCATGCAGGTGA
AGGCAGCGGCGGTGTGACAGACGAAACTCTTCGACTGCAGGAGATCAAGT
CGAAAGAAGAACAGGAACAAGAGGACTTAAGCAAGTATGTACACGTTTGT
AGGACAAACCTAATCTTGGCTAATCTTTCTGTGCAGGTACGACGGCTACA
ACAAAGACTTGATCGACCGATTCTGTAACATGGGATTTGACGTCGAGCGC
GTTGTAGCCGCATTCAAATACTACGGCATTGATCGAATGGACGGAGAAGA
CTACGAGCTGGAGGAGGCGTACATGGGAGACATTACAGCGCGGCTCCTCG
GCGAGCCGTAG
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Coding sequence (CDS) from alignment at KZ851914.1:599147..600007+

>M747DRAFT_341490-T1 ID=M747DRAFT_341490-T1|Name=M747DRAFT_341490-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2223bp|location=Sequence derived from alignment at KZ851914.1:599147..600007+ (Aspergillus niger ATCC 13496)
ATGTCTGCCAATCGAGCAAGGCGTATCGCCAAAGAGATCGCCGACATCCA
CGCCGACACACAGTCGCAAATCACGGCTGAACCACTGCACGGTGGGGAGG
ATCTTACACATCTTCGAGGCACGTTCCCAGGGCCTCCAGGAACACCCTAT
GAAGGTGGAACCTATACCATCGACATTAAAATCCCCAACGATTATCCATT
TCGGCCTCCCCACATGAAGTTTGTAACCAAGGTCTGGCATCCCAACGTCA
GCAGTCAAACAGGTGCCATCTGCCTAGACACTCTTTCCACTGCGTGGTCG
CCGGTGCTCACCATCAAGTCTGCCCTTCTGTCACTGCAATCCCTGCTAAG
CACACCCGAGCCCAAAGATCCTCAAGATGCCGAGGTCGCCACGATGCTCC
TTCGGAGACCGCAGGAATTTGCACGAGTTGCTCAGGAGTGGGCTGTGATG
TATGCAGGAGCTCCCAGAAGGCATGCAGGTGAAGGCAGCGGCGGTGTGAC
AGACGAAACTCTTCGACTGCAGGAGATCAAGTCGAAAGAAGAACAGGAAC
AAGAGGACTTAAGCAAGTACGACGGCTACAACAAAGACTTGATCGACCGA
TTCTGTAACATGGGATTTGACGTCGAGCGCGTTGTAGCCGCATTCAAATA
CTACGGCATTGATCGAATGGACGGAGAAGACTACGAGCTGGAGGAGGCGT
ACATGGGAGACATTACAGCGCGGCTCCTCGGCGAGCCGTAGATGTCTGCC
AATCGAGCAAGGCGTATCGCCAAAGAGATCGCCGACATCCACGCCGACAC
ACAGTCGCAAATCACGGCTGAACCACTGCACGGTGGGGAGGATCTTACAC
ATCTTCGAGGCACGTTCCCAGGGCCTCCAGGAACACCCTATGAAGGTGGA
ACCTATACCATCGACATTAAAATCCCCAACGATTATCCATTTCGGCCTCC
CCACATGAAGTTTGTAACCAAGGTCTGGCATCCCAACGTCAGCAGTCAAA
CAGGTGCCATCTGCCTAGACACTCTTTCCACTGCGTGGTCGCCGGTGCTC
ACCATCAAGTCTGCCCTTCTGTCACTGCAATCCCTGCTAAGCACACCCGA
GCCCAAAGATCCTCAAGATGCCGAGGTCGCCACGATGCTCCTTCGGAGAC
CGCAGGAATTTGCACGAGTTGCTCAGGAGTGGGCTGTGATGTATGCAGGA
GCTCCCAGAAGGCATGCAGGTGAAGGCAGCGGCGGTGTGACAGACGAAAC
TCTTCGACTGCAGGAGATCAAGTCGAAAGAAGAACAGGAACAAGAGGACT
TAAGCAAGTACGACGGCTACAACAAAGACTTGATCGACCGATTCTGTAAC
ATGGGATTTGACGTCGAGCGCGTTGTAGCCGCATTCAAATACTACGGCAT
TGATCGAATGGACGGAGAAGACTACGAGCTGGAGGAGGCGTACATGGGAG
ACATTACAGCGCGGCTCCTCGGCGAGCCGTAGATGTCTGCCAATCGAGCA
AGGCGTATCGCCAAAGAGATCGCCGACATCCACGCCGACACACAGTCGCA
AATCACGGCTGAACCACTGCACGGTGGGGAGGATCTTACACATCTTCGAG
GCACGTTCCCAGGGCCTCCAGGAACACCCTATGAAGGTGGAACCTATACC
ATCGACATTAAAATCCCCAACGATTATCCATTTCGGCCTCCCCACATGAA
GTTTGTAACCAAGGTCTGGCATCCCAACGTCAGCAGTCAAACAGGTGCCA
TCTGCCTAGACACTCTTTCCACTGCGTGGTCGCCGGTGCTCACCATCAAG
TCTGCCCTTCTGTCACTGCAATCCCTGCTAAGCACACCCGAGCCCAAAGA
TCCTCAAGATGCCGAGGTCGCCACGATGCTCCTTCGGAGACCGCAGGAAT
TTGCACGAGTTGCTCAGGAGTGGGCTGTGATGTATGCAGGAGCTCCCAGA
AGGCATGCAGGTGAAGGCAGCGGCGGTGTGACAGACGAAACTCTTCGACT
GCAGGAGATCAAGTCGAAAGAAGAACAGGAACAAGAGGACTTAAGCAAGT
ACGACGGCTACAACAAAGACTTGATCGACCGATTCTGTAACATGGGATTT
GACGTCGAGCGCGTTGTAGCCGCATTCAAATACTACGGCATTGATCGAAT
GGACGGAGAAGACTACGAGCTGGAGGAGGCGTACATGGGAGACATTACAG
CGCGGCTCCTCGGCGAGCCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC1_2M747DRAFT_341490Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_341490-T1.exon1M747DRAFT_341490-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_341490-T1.exon2M747DRAFT_341490-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_341490-T1.exon3M747DRAFT_341490-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_341490-T1.cdsM747DRAFT_341490-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_341490-T1M747DRAFT_341490-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR015368
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
DBxrefPFAM:PF09288
ProductUbiquitin-conjugating enzyme E2 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:599147..600007 +
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