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M747DRAFT_341824-T1, M747DRAFT_341824-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_341824-T1
Unique NameM747DRAFT_341824-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851916.1:288556..288957+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_341824-T1 ID=M747DRAFT_341824-T1|Name=M747DRAFT_341824-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=402bp|location=Sequence derived from alignment at KZ851916.1:288556..288957+ (Aspergillus niger ATCC 13496)
ATGCCTTTCACTGCCTCGTAAGTCTTGCAACCCCTCGCGACGTCATCTTT
TGGCGATTTCCTATCCAGTCGCGCGCATACCTGGACCTTGACGAGCTGGA
GCTGTCTTGGGATAGCTTGCGATCCCAATAATCTGAATGACGAGAGCATA
GTGTCGTGGGTATGCTAACGCCGTTGGGACCATAGGGATATCTGCAAGAT
CATCTTTGCGATCATCTTGCCGCCACTGGGTGTTTTCCTGGAGCGAGGAT
GCGGTGCTGATTTCCTGATCAACATCTGTTTGACAATCCTGGGTTGGCTC
CCTGGTGTCATTCATGCCTTGTACGTGGCCCGCCAAGTGATGGATTTCCG
GAGATTCCGAGGCTAACTCGTTTCGTTCAGCTATATCATATTCAAATACT
AG
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Coding sequence (CDS) from alignment at KZ851916.1:288556..288957+

>M747DRAFT_341824-T1 ID=M747DRAFT_341824-T1|Name=M747DRAFT_341824-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=522bp|location=Sequence derived from alignment at KZ851916.1:288556..288957+ (Aspergillus niger ATCC 13496)
ATGCCTTTCACTGCCTCGGATATCTGCAAGATCATCTTTGCGATCATCTT
GCCGCCACTGGGTGTTTTCCTGGAGCGAGGATGCGGTGCTGATTTCCTGA
TCAACATCTGTTTGACAATCCTGGGTTGGCTCCCTGGTGTCATTCATGCC
TTCTATATCATATTCAAATACTAGATGCCTTTCACTGCCTCGGATATCTG
CAAGATCATCTTTGCGATCATCTTGCCGCCACTGGGTGTTTTCCTGGAGC
GAGGATGCGGTGCTGATTTCCTGATCAACATCTGTTTGACAATCCTGGGT
TGGCTCCCTGGTGTCATTCATGCCTTCTATATCATATTCAAATACTAGAT
GCCTTTCACTGCCTCGGATATCTGCAAGATCATCTTTGCGATCATCTTGC
CGCCACTGGGTGTTTTCCTGGAGCGAGGATGCGGTGCTGATTTCCTGATC
AACATCTGTTTGACAATCCTGGGTTGGCTCCCTGGTGTCATTCATGCCTT
CTATATCATATTCAAATACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PMP3M747DRAFT_341824Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_341824-T1.exon1M747DRAFT_341824-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_341824-T1.exon2M747DRAFT_341824-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_341824-T1.exon3M747DRAFT_341824-T1.exon3Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_341824-T1.cdsM747DRAFT_341824-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_341824-T1M747DRAFT_341824-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519161.1
NoteantiSMASH:Cluster_8519161.2
NoteEggNog:ENOG41
DBxrefInterPro:IPR000612
DBxrefPFAM:PF01679
Productplasma membrane proteolipid Pmp3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851916.1supercontigKZ851916.1:288556..288957 +
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