You are here

Home

M747DRAFT_342656-T1, M747DRAFT_342656-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_342656-T1
Unique NameM747DRAFT_342656-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851920.1:105576..107028+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_342656-T1 ID=M747DRAFT_342656-T1|Name=M747DRAFT_342656-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1453bp|location=Sequence derived from alignment at KZ851920.1:105576..107028+ (Aspergillus niger ATCC 13496)
ATGGGCAAGACCTTCAAAAAAATATATGCCAGCTCATTTGGCAAATTCGA
CGGTAATTCGGACAAAATACCCCAATGGATACGGGCCAACGGAGGCCAAT
ATTCCAAGGATATTAGCAAAGAGATCACCCATCTGATTACCACCAAGGAA
GCCTTCAAGGATAATGTTGAAGCAGGTAGGCACTTCATGGATCCACCTTC
TCTCGTCATGCTATATAACTACCCCTGAATCTTTTGGACACAAGAAATGC
ATACATATCTAACAAAGACATCGAACAACAGTCCGCAAAGCTAAGCAACT
AAGGACTATAAAAATTGTCTCTTACGACTGGCTGGAAGACTCTCTCTTAT
CTAAGAATCGGAGACCGAAGCGTGAGACGGAGTACCTTCTCGTGGATATA
CTGAAGAGTGAGAATAAGAAGAGGGGTAAAGAGAGAGACAAGATAAGGAA
AAAGGAGAAAGAAAAGCCTAGGAGAAAAGGTACGTTTGCTTCTCTTGGGG
CGAGTTGGTGATCGTTGGAGTTGGGTCCAACCGAGGAAGTGAATTCGGAC
GGACTTGACTACATATATCACCGTAATGACTGACATGTGCAACTAGGTAA
TCTGAAGAATCAGGACCCCTTTGGCAGGAAGAGAAAGGGCGTAAAGGCCG
GCACTGCGGTGTGTATGTTATCGTCTATTCCCTCGTTCTGCGTGTTACGA
AGGCTGATTCAGGCTGGCGATCTAGCGAGATATCACATTTATACAGATCA
AGACGCAAGAGTGACGTACAATGCTACGCTTGTCCGGTCGATGCAGGGCA
AAAACTACAAGGAGAGATATGTGGTCAGGGTGAGTTAGTCTTCTTTGCAA
TGCTGTGAATTCGCTCTCGTTTTGTCTCTCCAGGCAGGTGGAGTATATGT
ATCACGAGAAGAAGGCTGATCGAGTAGCTGTATGTAGGTATACGAGTCTA
ATAAAGAACCCCATGTCTACGCTACACATCTCGAGTACAGTCGTATTGGC
AAGCAGCAGAGTCAACTCCTGACACCGCTGAAAGCAGATCAAGACTCCGC
AGTGAAGGCTTTCAAGAAGATTTTCAAGGACAAAACAGGTAAAGAGTGGG
AAGAGCGACTGAACGGTGTTTTACCCTCTGGTAAGAGGGATGCTGATGGC
AAATTACTGCTTCCTCACGAGAACTGGTTTTACTACGAGGATCGGGCTGG
GATGTTGTCAAATTTCCTTCGGGGAGTTATAGATGCACCCGACGGCGATG
GCTCGATGGTTGTCAAGCAAGAGCATCTAGATGCACCAATGCAAGGCATC
AAGCACGAGTCACCGCAGGATGCGAATGATGAGAGGCCAGGAAGCGACGA
GTCAATAATCGTATACGATTTGACTGGTTCGGACGTAGAGGTTCTGAACT
GTCCGCGAGACAAATATACCCGGTCGGCTAGCCCTAACTGTTTCCGAGGC
TAA
back to top

Coding sequence (CDS) from alignment at KZ851920.1:105576..107028+

>M747DRAFT_342656-T1 ID=M747DRAFT_342656-T1|Name=M747DRAFT_342656-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3360bp|location=Sequence derived from alignment at KZ851920.1:105576..107028+ (Aspergillus niger ATCC 13496)
ATGGGCAAGACCTTCAAAAAAATATATGCCAGCTCATTTGGCAAATTCGA
CGGTAATTCGGACAAAATACCCCAATGGATACGGGCCAACGGAGGCCAAT
ATTCCAAGGATATTAGCAAAGAGATCACCCATCTGATTACCACCAAGGAA
GCCTTCAAGGATAATGTTGAAGCAGGTAATCTGAAGAATCAGGACCCCTT
TGGCAGGAAGAGAAAGGGCGTAAAGGCCGGCACTGCGGTGTATCAAGACG
CAAGAGTGACGTACAATGCTACGCTTGTCCGGTCGATGCAGGGCAAAAAC
TACAAGGAGAGATATGTGGTCAGGGTATACGAGTCTAATAAAGAACCCCA
TGTCTACGCTACACATCTCGAGTACAGTCGTATTGGCAAGCAGCAGAGTC
AACTCCTGACACCGCTGAAAGCAGATCAAGACTCCGCAGTGAAGGCTTTC
AAGAAGATTTTCAAGGACAAAACAGGTAAAGAGTGGGAAGAGCGACTGAA
CGGTGTTTTACCCTCTGGTAAGAGGGATGCTGATGGCAAATTACTGCTTC
CTCACGAGAACTGGTTTTACTACGAGGATCGGGCTGGGATGTTGTCAAAT
TTCCTTCGGGGAGTTATAGATGCACCCGACGGCGATGGCTCGATGGTTGT
CAAGCAAGAGCATCTAGATGCACCAATGCAAGGCATCAAGCACGAGTCAC
CGCAGGATGCGAATGATGAGAGGCCAGGAAGCGACGAGTCAATAATCGTA
TACGATTTGACTGGTTCGGACGTAGAGGTTCTGAACTGTCCGCGAGACAA
ATATACCCGGTCGGCTAGCCCTAACTGTTTCCGAGGCTAAATGGGCAAGA
CCTTCAAAAAAATATATGCCAGCTCATTTGGCAAATTCGACGGTAATTCG
GACAAAATACCCCAATGGATACGGGCCAACGGAGGCCAATATTCCAAGGA
TATTAGCAAAGAGATCACCCATCTGATTACCACCAAGGAAGCCTTCAAGG
ATAATGTTGAAGCAGGTAATCTGAAGAATCAGGACCCCTTTGGCAGGAAG
AGAAAGGGCGTAAAGGCCGGCACTGCGGTGTATCAAGACGCAAGAGTGAC
GTACAATGCTACGCTTGTCCGGTCGATGCAGGGCAAAAACTACAAGGAGA
GATATGTGGTCAGGGTATACGAGTCTAATAAAGAACCCCATGTCTACGCT
ACACATCTCGAGTACAGTCGTATTGGCAAGCAGCAGAGTCAACTCCTGAC
ACCGCTGAAAGCAGATCAAGACTCCGCAGTGAAGGCTTTCAAGAAGATTT
TCAAGGACAAAACAGGTAAAGAGTGGGAAGAGCGACTGAACGGTGTTTTA
CCCTCTGGTAAGAGGGATGCTGATGGCAAATTACTGCTTCCTCACGAGAA
CTGGTTTTACTACGAGGATCGGGCTGGGATGTTGTCAAATTTCCTTCGGG
GAGTTATAGATGCACCCGACGGCGATGGCTCGATGGTTGTCAAGCAAGAG
CATCTAGATGCACCAATGCAAGGCATCAAGCACGAGTCACCGCAGGATGC
GAATGATGAGAGGCCAGGAAGCGACGAGTCAATAATCGTATACGATTTGA
CTGGTTCGGACGTAGAGGTTCTGAACTGTCCGCGAGACAAATATACCCGG
TCGGCTAGCCCTAACTGTTTCCGAGGCTAAATGGGCAAGACCTTCAAAAA
AATATATGCCAGCTCATTTGGCAAATTCGACGGTAATTCGGACAAAATAC
CCCAATGGATACGGGCCAACGGAGGCCAATATTCCAAGGATATTAGCAAA
GAGATCACCCATCTGATTACCACCAAGGAAGCCTTCAAGGATAATGTTGA
AGCAGGTAATCTGAAGAATCAGGACCCCTTTGGCAGGAAGAGAAAGGGCG
TAAAGGCCGGCACTGCGGTGTATCAAGACGCAAGAGTGACGTACAATGCT
ACGCTTGTCCGGTCGATGCAGGGCAAAAACTACAAGGAGAGATATGTGGT
CAGGGTATACGAGTCTAATAAAGAACCCCATGTCTACGCTACACATCTCG
AGTACAGTCGTATTGGCAAGCAGCAGAGTCAACTCCTGACACCGCTGAAA
GCAGATCAAGACTCCGCAGTGAAGGCTTTCAAGAAGATTTTCAAGGACAA
AACAGGTAAAGAGTGGGAAGAGCGACTGAACGGTGTTTTACCCTCTGGTA
AGAGGGATGCTGATGGCAAATTACTGCTTCCTCACGAGAACTGGTTTTAC
TACGAGGATCGGGCTGGGATGTTGTCAAATTTCCTTCGGGGAGTTATAGA
TGCACCCGACGGCGATGGCTCGATGGTTGTCAAGCAAGAGCATCTAGATG
CACCAATGCAAGGCATCAAGCACGAGTCACCGCAGGATGCGAATGATGAG
AGGCCAGGAAGCGACGAGTCAATAATCGTATACGATTTGACTGGTTCGGA
CGTAGAGGTTCTGAACTGTCCGCGAGACAAATATACCCGGTCGGCTAGCC
CTAACTGTTTCCGAGGCTAAATGGGCAAGACCTTCAAAAAAATATATGCC
AGCTCATTTGGCAAATTCGACGGTAATTCGGACAAAATACCCCAATGGAT
ACGGGCCAACGGAGGCCAATATTCCAAGGATATTAGCAAAGAGATCACCC
ATCTGATTACCACCAAGGAAGCCTTCAAGGATAATGTTGAAGCAGGTAAT
CTGAAGAATCAGGACCCCTTTGGCAGGAAGAGAAAGGGCGTAAAGGCCGG
CACTGCGGTGTATCAAGACGCAAGAGTGACGTACAATGCTACGCTTGTCC
GGTCGATGCAGGGCAAAAACTACAAGGAGAGATATGTGGTCAGGGTATAC
GAGTCTAATAAAGAACCCCATGTCTACGCTACACATCTCGAGTACAGTCG
TATTGGCAAGCAGCAGAGTCAACTCCTGACACCGCTGAAAGCAGATCAAG
ACTCCGCAGTGAAGGCTTTCAAGAAGATTTTCAAGGACAAAACAGGTAAA
GAGTGGGAAGAGCGACTGAACGGTGTTTTACCCTCTGGTAAGAGGGATGC
TGATGGCAAATTACTGCTTCCTCACGAGAACTGGTTTTACTACGAGGATC
GGGCTGGGATGTTGTCAAATTTCCTTCGGGGAGTTATAGATGCACCCGAC
GGCGATGGCTCGATGGTTGTCAAGCAAGAGCATCTAGATGCACCAATGCA
AGGCATCAAGCACGAGTCACCGCAGGATGCGAATGATGAGAGGCCAGGAA
GCGACGAGTCAATAATCGTATACGATTTGACTGGTTCGGACGTAGAGGTT
CTGAACTGTCCGCGAGACAAATATACCCGGTCGGCTAGCCCTAACTGTTT
CCGAGGCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_342656M747DRAFT_342656Aspergillus niger ATCC 13496gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_342656-T1.exon1M747DRAFT_342656-T1.exon1Aspergillus niger ATCC 13496exon
M747DRAFT_342656-T1.exon2M747DRAFT_342656-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_342656-T1.exon3M747DRAFT_342656-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_342656-T1.exon4M747DRAFT_342656-T1.exon4Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_342656-T1.cdsM747DRAFT_342656-T1.cdsAspergillus niger ATCC 13496CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_342656-T1M747DRAFT_342656-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036930
DBxrefInterPro:IPR036420
DBxrefInterPro:IPR001357
DBxrefInterPro:IPR008893
DBxrefPFAM:PF05406
DBxrefPFAM:PF12738
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851920.1supercontigKZ851920.1:105576..107028 +
Powered by Drupal