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M747DRAFT_349947-T1, M747DRAFT_349947-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_349947-T1
Unique NameM747DRAFT_349947-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851911.1:578856..580397-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_349947-T1 ID=M747DRAFT_349947-T1|Name=M747DRAFT_349947-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1542bp|location=Sequence derived from alignment at KZ851911.1:578856..580397- (Aspergillus niger ATCC 13496)
ATGATCAGATGTCCCATATGCCAGAAACACGTCCTTCTTTCAGAAATCAA
CGAACACCTCGATTCTGGCTGTCAAAAATTCATTGCAATTACCCACCTAC
AAAGTACGATATCATCTACCCTAAGCGAAAATGACTGCAACTATCTACAA
CCAACGGAACAACGTCAGTCGAAAGAGAATCGCAAGTCAACAGGACCATC
CGCTAGTGTTACCGGAAGCTCAAAGAGAGCGGTCTCTCAACCGGATTCCA
ATACCACACGCAAGAAGGCACATGCGGGATTAGCAACGGAGCAATTACAT
CTTCGGCATGCACCTCTAGCTGAGCAAGTTCGGCCACGATGCTTTGATGA
TATCGTCGGTCAGAAATCCTTGATCGGGCCAAATGGTACACTCAGGCGGT
TGATTGAACAAGATGAGCTTCCGAACCTGATTTTATGGGGGCCCCCAGGA
AGTGGTAAAACTACAATTGCCAGAATCATCGGGCCAATGATGAGGAGAAA
GGTCTACGAGATTAGTAGCTTGACTACAATAACGACAGAGTACAGAGACA
TCGTCACCAAGGCTACACACGATGGTCGGAATAAATCCATCATATTCTGT
GATGAGATACATCGACTCACGCGTCCACAACAAGATATTTTTCTCGATGC
TATGCGAAGGAATAAAATCACTCTCATCGGTGCGACGACAGAGAACCCAT
CATTGAATATTCACCATACACTTGTCTACAAATGCAGGGTCTTCACTGTC
GCAAAGCCAACTACCACTGATTTGGCCACTATCCTTCGTCGTTCATTGAT
ATCACAAACCCACCTAAAGTCATCCCCACTTCTGGATGATGAATTCCTTC
AATACATAGCTGGATTCGCTGATGGGGACAGTAGAACCGCACTGAACGTT
CTGGAGATAGCTACCGATCTCTGCAGACGACCAAATATGACCAAGGAGAA
GCTGAAGTATTCATTAACCAAGAGCTTACTCTACGACCGTTCGGGCGACC
AGCACTATGACACCATTTCAGCACTCCACAAGTCAATTCGAGGCAGTGAT
CCCGATGCTGCGCTATATTACCTTGTACGAATGCTCCAGTCAGGCGAGAA
TCCTTTGTTCATCGCTCGCCGGCTTATCGTGGCGACGTCGGAGGACATCG
GGCTGGCGAATAATGTGTTGCAAACATATGCAACCTCCATCTACTTGATG
ATTGAGAAGCTAGGGATCAATGACGCACAGTCTGCTTTGGCTCAACTGGT
GATAACAATGTGTTTGTCGAAGAAGAGCACTCGATCTTATCGCGGGCTTA
ATAATGCCCTTGCTGCAGTGAAGGAGCCTGGGATGGGCGATCTTCCAATT
CCTTTTCACATCTTGGATCGTAGACCCGAGCTTCTGAGAGAGGCTGACCT
GGTCGTGACTACCGACTCCCAACAAAGTCAGAAAAGGCTGCCATCTACCC
AGGGGTTTCTTCCGCATGCTCTCGAAGGACGGAAGTTTCTGGAAGATACT
GATTTTCTGTTCAAACGAGATCCAGACCTAAGTTATGGGTGA
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Coding sequence (CDS) from alignment at KZ851911.1:578856..580397-

>M747DRAFT_349947-T1 ID=M747DRAFT_349947-T1|Name=M747DRAFT_349947-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1542bp|location=Sequence derived from alignment at KZ851911.1:578856..580397- (Aspergillus niger ATCC 13496)
ATGATCAGATGTCCCATATGCCAGAAACACGTCCTTCTTTCAGAAATCAA
CGAACACCTCGATTCTGGCTGTCAAAAATTCATTGCAATTACCCACCTAC
AAAGTACGATATCATCTACCCTAAGCGAAAATGACTGCAACTATCTACAA
CCAACGGAACAACGTCAGTCGAAAGAGAATCGCAAGTCAACAGGACCATC
CGCTAGTGTTACCGGAAGCTCAAAGAGAGCGGTCTCTCAACCGGATTCCA
ATACCACACGCAAGAAGGCACATGCGGGATTAGCAACGGAGCAATTACAT
CTTCGGCATGCACCTCTAGCTGAGCAAGTTCGGCCACGATGCTTTGATGA
TATCGTCGGTCAGAAATCCTTGATCGGGCCAAATGGTACACTCAGGCGGT
TGATTGAACAAGATGAGCTTCCGAACCTGATTTTATGGGGGCCCCCAGGA
AGTGGTAAAACTACAATTGCCAGAATCATCGGGCCAATGATGAGGAGAAA
GGTCTACGAGATTAGTAGCTTGACTACAATAACGACAGAGTACAGAGACA
TCGTCACCAAGGCTACACACGATGGTCGGAATAAATCCATCATATTCTGT
GATGAGATACATCGACTCACGCGTCCACAACAAGATATTTTTCTCGATGC
TATGCGAAGGAATAAAATCACTCTCATCGGTGCGACGACAGAGAACCCAT
CATTGAATATTCACCATACACTTGTCTACAAATGCAGGGTCTTCACTGTC
GCAAAGCCAACTACCACTGATTTGGCCACTATCCTTCGTCGTTCATTGAT
ATCACAAACCCACCTAAAGTCATCCCCACTTCTGGATGATGAATTCCTTC
AATACATAGCTGGATTCGCTGATGGGGACAGTAGAACCGCACTGAACGTT
CTGGAGATAGCTACCGATCTCTGCAGACGACCAAATATGACCAAGGAGAA
GCTGAAGTATTCATTAACCAAGAGCTTACTCTACGACCGTTCGGGCGACC
AGCACTATGACACCATTTCAGCACTCCACAAGTCAATTCGAGGCAGTGAT
CCCGATGCTGCGCTATATTACCTTGTACGAATGCTCCAGTCAGGCGAGAA
TCCTTTGTTCATCGCTCGCCGGCTTATCGTGGCGACGTCGGAGGACATCG
GGCTGGCGAATAATGTGTTGCAAACATATGCAACCTCCATCTACTTGATG
ATTGAGAAGCTAGGGATCAATGACGCACAGTCTGCTTTGGCTCAACTGGT
GATAACAATGTGTTTGTCGAAGAAGAGCACTCGATCTTATCGCGGGCTTA
ATAATGCCCTTGCTGCAGTGAAGGAGCCTGGGATGGGCGATCTTCCAATT
CCTTTTCACATCTTGGATCGTAGACCCGAGCTTCTGAGAGAGGCTGACCT
GGTCGTGACTACCGACTCCCAACAAAGTCAGAAAAGGCTGCCATCTACCC
AGGGGTTTCTTCCGCATGCTCTCGAAGGACGGAAGTTTCTGGAAGATACT
GATTTTCTGTTCAAACGAGATCCAGACCTAAGTTATGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006310DNA recombination
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0009378four-way junction helicase activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_349947M747DRAFT_349947Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_349947-T1.cdsM747DRAFT_349947-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_349947-T1.exon1M747DRAFT_349947-T1.exon1Aspergillus niger ATCC 13496exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_349947-T1M747DRAFT_349947-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_8519111.7
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR032423
DBxrefInterPro:IPR021886
DBxrefInterPro:IPR008824
DBxrefInterPro:IPR003593
DBxrefInterPro:IPR006642
DBxrefPFAM:PF05496
DBxrefPFAM:PF12002
DBxrefPFAM:PF16193
DBxrefPFAM:PF07728
DBxrefPFAM:PF00004
Productwerner helicase interacting protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851911.1supercontigKZ851911.1:578856..580397 -
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