You are here

Home

M747DRAFT_35470-T1, M747DRAFT_35470-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_35470-T1
Unique NameM747DRAFT_35470-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:81691..84428+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_35470-T1 ID=M747DRAFT_35470-T1|Name=M747DRAFT_35470-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2738bp|location=Sequence derived from alignment at KZ851914.1:81691..84428+ (Aspergillus niger ATCC 13496)
GCTCCGCGGGTGCCCTACTAGAGCCCAAGGTAACCCGAATCTTTGCCCTG
TTGCCATACACGGTGTGCGGAAGTTCGCTCCGCGTCGGAAGTCCCTTGAC
ACCAAGGTACAGGGCATAGATCGTGGCAGTATGAGCCCGACACGTTCTGC
GCCGCTAACCTCACGGCCTACATCTTGTGGAAAAGCGATTCCCAAGCCAC
GACCCCGCTTAGAGCCCTCACCTTTACCTCTGCAGCCTGTTGAGCATGTG
CCGTCGACACAAGGTCAATTCTTAAATGCGACCGCTTCTACGACGCACAA
CGTTTCGCCGGCAAAAGCCGTTCGCGGCTCAAGTAGCCTGTTTTCTGGAC
ATGGAAATCTAGGATATGTTCCCATCACAGCGCCCCCCGCTCCAGAATTT
ATAACAGATTCTCCTTCCAAACACCCCTCCTTCGGATATCACCACACCGC
TGCTTCTTCCTCTTCAATGCCCCAATCCGCGTTATTCACGACATTCTCCA
CTTCCAGTTCAGGGAAACAGTCTCCAAAGGAAACCCAATCATCAGATGAA
CCCAACAGCGATAATTTTGCAGACTTCCCCGAACCCTCATTCATACCCAA
ACCTTTGAAGAGGACACTCATGGATGCAGCGCCACTGAAGGAACGACAAA
CAAAGAAGCAGAAGCGGGAGGAACCTAGTTCTATGCGCTTACCGGAACCT
CATGAAATGCCTCCGATAGAAGACGATGGTACAAAGCCGCCTTATAGCTA
TGCAACGCTGATTGGCATGTCTATACTTCGTGCGCCAAACAGGCGATTGA
CATTAGCGCAAATATACAAGTGGATCTCGGATACGTTTTCGTATTACAAG
AATAGTGACCCAGGCTGGCAGAACAGCATTCGGCACAATCTCAGCCTGAA
TAAAGCATTTATCAAGCAAGAAAGGCCTAAGGATGATCCAGGGAAAGGCA
ACTACTGGGCTATTGAGCCTGGAATGGAAGCTCAATTCCTCAAAGACAAG
CCACTACGCCGCGCAACCATGTCCAGCCTTCCTCTTCCGGCAGCGCCTCA
GAAGGACACAGCGCGTCCGCATACTTCAAGTACTACTACATGGGCAATCC
CGCCCCCAGCATACCAACCGACAGGAAAACATTCGAAGCCTGTGGATCTA
TCTTCTGATGCCACGCTCCCTGCTTCTGATCCTGCTCTTCAAGAAGACAC
GAGTGACGAACATACCAACCGTACTGTGCAGACTCTTGGTCCTCGGTCAT
CACCGCTCCAAACCATACATTCGTCACCTCCTGTTGTGCCCCCTCGTTAC
ACTCGACAAGGGACCCCTCCAACGCCATCTCAAACCATCACTTCAGGAAT
CGTTTCCATCACCACTAAAAGGAAACAAAACGCAGTGAATGACAGTGGAT
ACTTCTCGTCGCTAGAGTCCTCAGCTATGCGACCAAGCAAAGCTGGGCAT
ATTCTAACTTCGGATTTAGACATAGACCCGCCACGAATTAAGCGTGGTCG
GGCAGAGGAAGAGATAGCTCGAATTCGAAGTTCTTCCCACGATATTAGCC
CAAGTCAGTGTGGCATCTTGAAGGACTCAGGATTAGTTGTTGGTTCATCG
CCCCTCCGTGGGGAATATATCAGCATGCTACCCCCTCCTATCACGCCTGT
CATCAAATTCAAGAAACCCGCTAAACCACCACCTTCAGTATCACCAAACA
CGAATCTCAGGAACCATCGTAAGAAGATCCAACACATGGTCAATTCCCCG
ATAAAGCATTTGGGCCTCAACGATGAAGATCTTCCTTGGAGCCCGGCTTT
CAATATCCAAGACGAGACGTTCACGCCGAGTGAAAATCTCCATACTGGCT
TCGATGTCTTTGCGGATCCTGTTCCGGATAATATATCAACCCCAGCATAC
GGCTCGCCAGAGAAGCGGTCTGCAAAGCGTACTCGAACAGACGCTGGCGG
ATCAAATGGCAATATACTGGCAGATATCACATCATTGAATTCCAACAACA
GGCTGGGGGTGCAACCGTTGCAATCATCGACCAAAGCTAAAAGCCTTCTT
TTCCCCGAGTCGCCTTCCAAAGTAACTGACTCTGCACGTTATCTGGACTC
TTCACATGAGGATTTCTTCTCGTTTCATCTTTTTGATGAAAGCCCGGCGG
AAATCGATGGCGTGGATATTTTGCAGGGATTCCAGAAGATCGGAGGTATG
AACAAGGAAGAACCGTCAAGAGCGAAATCATACCCACCGAGGCCTTCGTG
CAGTCATCGAAGCAACACACCTCTGTTCTAAAGCCTAAAGCCAGGAGGTT
GGGGGCTTGGGCGATGAAGGTAAAATTGAAGCCAAACAAAACAATAATTC
GCAGCGAGCGCCTCGGGGAAGTCATATTTTCTTTCTGGATGGCGCACTAA
ATCGGCAGATTGTCTGATCCTGCTGGTAGACAACGGGGTTTAATGGGGAG
GAGGGCGCTTTGAATATTTGCGTGTTTATTTCACTTCTGAGCAGATGGGG
TTGCTTGGAGTTTAAAAGGGTGGTAGTCGGTTATGACATATACCGGACCT
GGAATGACCTTGTTACGACCTTTATGACGACATTTGGTAAGATGTACATG
AGTATGTGATGTCTAAACGAACTTGAGTTTCTGCTTTTCCGCTTGCGTGT
CGTTTCAGTTCTTTTTGCTTGCTCCCCGGACTGTTTGGTGATTTACCGAG
CACATATTTAGTTAGTTTCCACTACAAGAGCGCACAAT
back to top

Coding sequence (CDS) from alignment at KZ851914.1:81691..84428+

>M747DRAFT_35470-T1 ID=M747DRAFT_35470-T1|Name=M747DRAFT_35470-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2151bp|location=Sequence derived from alignment at KZ851914.1:81691..84428+ (Aspergillus niger ATCC 13496)
ATGAGCCCGACACGTTCTGCGCCGCTAACCTCACGGCCTACATCTTGTGG
AAAAGCGATTCCCAAGCCACGACCCCGCTTAGAGCCCTCACCTTTACCTC
TGCAGCCTGTTGAGCATGTGCCGTCGACACAAGGTCAATTCTTAAATGCG
ACCGCTTCTACGACGCACAACGTTTCGCCGGCAAAAGCCGTTCGCGGCTC
AAGTAGCCTGTTTTCTGGACATGGAAATCTAGGATATGTTCCCATCACAG
CGCCCCCCGCTCCAGAATTTATAACAGATTCTCCTTCCAAACACCCCTCC
TTCGGATATCACCACACCGCTGCTTCTTCCTCTTCAATGCCCCAATCCGC
GTTATTCACGACATTCTCCACTTCCAGTTCAGGGAAACAGTCTCCAAAGG
AAACCCAATCATCAGATGAACCCAACAGCGATAATTTTGCAGACTTCCCC
GAACCCTCATTCATACCCAAACCTTTGAAGAGGACACTCATGGATGCAGC
GCCACTGAAGGAACGACAAACAAAGAAGCAGAAGCGGGAGGAACCTAGTT
CTATGCGCTTACCGGAACCTCATGAAATGCCTCCGATAGAAGACGATGGT
ACAAAGCCGCCTTATAGCTATGCAACGCTGATTGGCATGTCTATACTTCG
TGCGCCAAACAGGCGATTGACATTAGCGCAAATATACAAGTGGATCTCGG
ATACGTTTTCGTATTACAAGAATAGTGACCCAGGCTGGCAGAACAGCATT
CGGCACAATCTCAGCCTGAATAAAGCATTTATCAAGCAAGAAAGGCCTAA
GGATGATCCAGGGAAAGGCAACTACTGGGCTATTGAGCCTGGAATGGAAG
CTCAATTCCTCAAAGACAAGCCACTACGCCGCGCAACCATGTCCAGCCTT
CCTCTTCCGGCAGCGCCTCAGAAGGACACAGCGCGTCCGCATACTTCAAG
TACTACTACATGGGCAATCCCGCCCCCAGCATACCAACCGACAGGAAAAC
ATTCGAAGCCTGTGGATCTATCTTCTGATGCCACGCTCCCTGCTTCTGAT
CCTGCTCTTCAAGAAGACACGAGTGACGAACATACCAACCGTACTGTGCA
GACTCTTGGTCCTCGGTCATCACCGCTCCAAACCATACATTCGTCACCTC
CTGTTGTGCCCCCTCGTTACACTCGACAAGGGACCCCTCCAACGCCATCT
CAAACCATCACTTCAGGAATCGTTTCCATCACCACTAAAAGGAAACAAAA
CGCAGTGAATGACAGTGGATACTTCTCGTCGCTAGAGTCCTCAGCTATGC
GACCAAGCAAAGCTGGGCATATTCTAACTTCGGATTTAGACATAGACCCG
CCACGAATTAAGCGTGGTCGGGCAGAGGAAGAGATAGCTCGAATTCGAAG
TTCTTCCCACGATATTAGCCCAAGTCAGTGTGGCATCTTGAAGGACTCAG
GATTAGTTGTTGGTTCATCGCCCCTCCGTGGGGAATATATCAGCATGCTA
CCCCCTCCTATCACGCCTGTCATCAAATTCAAGAAACCCGCTAAACCACC
ACCTTCAGTATCACCAAACACGAATCTCAGGAACCATCGTAAGAAGATCC
AACACATGGTCAATTCCCCGATAAAGCATTTGGGCCTCAACGATGAAGAT
CTTCCTTGGAGCCCGGCTTTCAATATCCAAGACGAGACGTTCACGCCGAG
TGAAAATCTCCATACTGGCTTCGATGTCTTTGCGGATCCTGTTCCGGATA
ATATATCAACCCCAGCATACGGCTCGCCAGAGAAGCGGTCTGCAAAGCGT
ACTCGAACAGACGCTGGCGGATCAAATGGCAATATACTGGCAGATATCAC
ATCATTGAATTCCAACAACAGGCTGGGGGTGCAACCGTTGCAATCATCGA
CCAAAGCTAAAAGCCTTCTTTTCCCCGAGTCGCCTTCCAAAGTAACTGAC
TCTGCACGTTATCTGGACTCTTCACATGAGGATTTCTTCTCGTTTCATCT
TTTTGATGAAAGCCCGGCGGAAATCGATGGCGTGGATATTTTGCAGGGAT
TCCAGAAGATCGGAGGTATGAACAAGGAAGAACCGTCAAGAGCGAAATCA
TACCCACCGAGGCCTTCGTGCAGTCATCGAAGCAACACACCTCTGTTCTA
A
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_35470M747DRAFT_35470Aspergillus niger ATCC 13496gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_35470-T1.utr5p1M747DRAFT_35470-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_35470-T1.exon1M747DRAFT_35470-T1.exon1Aspergillus niger ATCC 13496exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_35470-T1.cdsM747DRAFT_35470-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_35470-T1.utr3p1M747DRAFT_35470-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_35470-T1M747DRAFT_35470-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR030456
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR001766
DBxrefPFAM:PF00250
Productforkhead box protein L2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:81691..84428 +
Powered by Drupal