|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851945.1:58919..60625- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_359727-T1 ID=M747DRAFT_359727-T1|Name=M747DRAFT_359727-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1707bp|location=Sequence derived from alignment at KZ851945.1:58919..60625- (Aspergillus niger ATCC 13496)
GTTGGTTCCGGCCATTTACTTGCCATTTTATATTGTACAAGAAGAACTCA
TCTCACTAGTTGTAACGTGATTAGGTACAATATATGTTGGGTCGCATACT
CGCAACCCCTCTTGGACTATTTCCACCTTTCGCCTCCGGACCATCGCCGT
CCCACCCCTACAGGTCATCCTCTCCTAACCCATCTTGTTGATCCTAGAAA
CAATGGAAGCATCACATTTAGATGGCATGGAAGCCGAGGCGTTCGAACGA
CTAACAATCATCGCTACAATTCCCCAAACACCAGTCCAAAGCTACATTCA
GGAAACGCTAGCAGCAATCCTGGATGAAGTATCCTTCCGTGAAGGCCACC
TCTCTATTACCCTCAAACAGAGAGGTAAAAAGTTTGCCTCACTATTCATT
AACCCACGTACATTGGCCCTGGAGACGTCGGAGATACAGACATACACCAC
CTACAGATGGCCCGGCGGCGATATGAACGAAGCATTGAAATTCAGTACGA
TATGTTGTCACCATTCAGATACTCTGCTAATGAAGACACAGCTGCCGCTC
TTCGAGTCCTCGCGGCCATCGCAGAGGCAGTTCAGGCGGGGTTGGTGGTC
TCTAAGAGGTAAACAACACGGACCACCAGTGTACTCTAACACTTTCGAAC
ACTAAATTTCACATAGAGACATATACTACAGTGATCCTATCTGCTTCGGC
TCCCAGAAAACCGTCGATACACTCGTTGATGACCTGGCACACACAATGGG
GGTGGATCGTGCTGCATTATATGTGGTTCGTGGGCCTCAACAGTACCTAC
TTCCAGACTGCTAAGTATCCTGCAACACAGGGGGCAGCAGCAAAAGGACT
TGTCGTGGGATACTATCAGATGACCACCACAAGCGCGGGAGTAGTGGACG
CGCGGTTATCAAACCAGGTCCGTTGCAGTCATCACTACTGCACACAGCAT
GGACTGATGTTCGCAGGATACTCTAGTACCTAGAATGCAAGACATCCACA
AAGTCGACCTTAAAGATGTTGCCTGGGTACTGGTTCTAGAGAAGGAGGTC
CCTGCTGCCATCAAAAACTTTATATATCAAGCTGGAGTGAACTGACACCC
TCAGGCCGTATACCGTCGACTCGCAAGCAGCAACTACCACATCAGATCTG
CAGCAGGCAAGGGCGTCCTCGTCACTGTAAGTGCTGATACCCCTATTACA
TTCTAAGAGACATACCAACCATTCCAGGGAAAAGGATATCCTGATCTCAG
TACTCGGGCATTCGTCCGTAAACTCTTCGACCACAGCCACCAACTCACCA
AGAAACCGCAATTCTACGCCTTAGTGGACGGTGACCCCGACGGCATGGCC
ATTATGGCCACATACAAGTATGGCTCTGTGGCTTTTGCCCACGAAAACCG
GAACTTGAATGTGCCCGGTCTCCACTGGCTAGGTTTGAGACTAGCGGAGG
TGGTTGCAGGAGCTGATCCACTAGGCGATGGCACGCTACTCCATCTTACG
AAGCGGGATAGGAAGAAGGCCATCGATATGCTGTCTAAAAATCCTGTCTG
GGAGGCTGATGGACCGGAGCCGGAATGGCGGGTCGAGCTGCAGCGAATGC
TCATGCTGAATGTCAAGGCAGAGATGGAGATCCTGTATGACATGGAGGGT
GGCTTGACAGGATGGCTAGATAGGAAGCTGGTCCATCTCATACAAAACAG
TAAGTAG back to topCoding sequence (CDS) from alignment at KZ851945.1:58919..60625- >M747DRAFT_359727-T1 ID=M747DRAFT_359727-T1|Name=M747DRAFT_359727-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=8316bp|location=Sequence derived from alignment at KZ851945.1:58919..60625- (Aspergillus niger ATCC 13496)
GGAAAAGGATATCCTGATCTCAGTACTCGGGCATTCGTCCGTAAACTCTT
CGACCACAGCCACCAACTCACCAAGAAACCGCAATTCTACGCCTTAGTGG
ACGGTGACCCCGACGGCATGGCCATTATGGCCACATACAAGTATGGCTCT
GTGGCTTTTGCCCACGAAAACCGGAACTTGAATGTGCCCGGTCTCCACTG
GCTAGGTTTGAGACTAGCGGAGGTGGTTGCAGGAGCTGATCCACTAGGCG
ATGGCACGCTACTCCATCTTACGAAGCGGGATAGGAAGAAGGCCATCGAT
ATGCTGTCTAAAAATCCTGTCTGGGAGGCTGATGGACCGGAGCCGGAATG
GCGGGTCGAGCTGCAGCGAATGCTCATGCTGAATGTCAAGGCAGAGATGG
AGATCCTGTATGACATGGAGGGTGGCTTGACAGGATGGCTAGATAGGAAG
CTGGTCCATCTCATACAAAACAGTAAGTAGGCCGTATACCGTCGACTCGC
AAGCAGCAACTACCACATCAGATCTGCAGCAGGCAAGGGCGTCCTCGTCA
CTGATACTCTAGTACCTAGAATGCAAGACATCCACAAAGTCGACCTTAAA
GATGTTGCCTGGGTACTGGTTCTAGAGAAGGAGGGGGCAGCAGCAAAAGG
ACTTGTCGTGGGATACTATCAGATGACCACCACAAGCGCGGGAGTAGTGG
ACGCGCGGTTATCAAACCAGAGACATATACTACAGTGATCCTATCTGCTT
CGGCTCCCAGAAAACCGTCGATACACTCGTTGATGACCTGGCACACACAA
TGGGGGTGGATCGTGCTGCATTATATGTGCTGCCGCTCTTCGAGTCCTCG
CGGCCATCGCAGAGGCAGTTCAGGCGGGGTTGGTGGTCTCTAAGAGATGG
AAGCATCACATTTAGATGGCATGGAAGCCGAGGCGTTCGAACGACTAACA
ATCATCGCTACAATTCCCCAAACACCAGTCCAAAGCTACATTCAGGAAAC
GCTAGCAGCAATCCTGGATGAAGTATCCTTCCGTGAAGGCCACCTCTCTA
TTACCCTCAAACAGAGAGGTAAAAAGTTTGCCTCACTATTCATTAACCCA
CGTACATTGGCCCTGGAGACGTCGGAGATACAGACATACACCACCTACAG
ATGGCCCGGCGGCGATATGAACGAAGCATTGAAATTCAGGAAAAGGATAT
CCTGATCTCAGTACTCGGGCATTCGTCCGTAAACTCTTCGACCACAGCCA
CCAACTCACCAAGAAACCGCAATTCTACGCCTTAGTGGACGGTGACCCCG
ACGGCATGGCCATTATGGCCACATACAAGTATGGCTCTGTGGCTTTTGCC
CACGAAAACCGGAACTTGAATGTGCCCGGTCTCCACTGGCTAGGTTTGAG
ACTAGCGGAGGTGGTTGCAGGAGCTGATCCACTAGGCGATGGCACGCTAC
TCCATCTTACGAAGCGGGATAGGAAGAAGGCCATCGATATGCTGTCTAAA
AATCCTGTCTGGGAGGCTGATGGACCGGAGCCGGAATGGCGGGTCGAGCT
GCAGCGAATGCTCATGCTGAATGTCAAGGCAGAGATGGAGATCCTGTATG
ACATGGAGGGTGGCTTGACAGGATGGCTAGATAGGAAGCTGGTCCATCTC
ATACAAAACAGTAAGTAGGCCGTATACCGTCGACTCGCAAGCAGCAACTA
CCACATCAGATCTGCAGCAGGCAAGGGCGTCCTCGTCACTGATACTCTAG
TACCTAGAATGCAAGACATCCACAAAGTCGACCTTAAAGATGTTGCCTGG
GTACTGGTTCTAGAGAAGGAGGGGGCAGCAGCAAAAGGACTTGTCGTGGG
ATACTATCAGATGACCACCACAAGCGCGGGAGTAGTGGACGCGCGGTTAT
CAAACCAGAGACATATACTACAGTGATCCTATCTGCTTCGGCTCCCAGAA
AACCGTCGATACACTCGTTGATGACCTGGCACACACAATGGGGGTGGATC
GTGCTGCATTATATGTGCTGCCGCTCTTCGAGTCCTCGCGGCCATCGCAG
AGGCAGTTCAGGCGGGGTTGGTGGTCTCTAAGAGATGGAAGCATCACATT
TAGATGGCATGGAAGCCGAGGCGTTCGAACGACTAACAATCATCGCTACA
ATTCCCCAAACACCAGTCCAAAGCTACATTCAGGAAACGCTAGCAGCAAT
CCTGGATGAAGTATCCTTCCGTGAAGGCCACCTCTCTATTACCCTCAAAC
AGAGAGGTAAAAAGTTTGCCTCACTATTCATTAACCCACGTACATTGGCC
CTGGAGACGTCGGAGATACAGACATACACCACCTACAGATGGCCCGGCGG
CGATATGAACGAAGCATTGAAATTCAGGAAAAGGATATCCTGATCTCAGT
ACTCGGGCATTCGTCCGTAAACTCTTCGACCACAGCCACCAACTCACCAA
GAAACCGCAATTCTACGCCTTAGTGGACGGTGACCCCGACGGCATGGCCA
TTATGGCCACATACAAGTATGGCTCTGTGGCTTTTGCCCACGAAAACCGG
AACTTGAATGTGCCCGGTCTCCACTGGCTAGGTTTGAGACTAGCGGAGGT
GGTTGCAGGAGCTGATCCACTAGGCGATGGCACGCTACTCCATCTTACGA
AGCGGGATAGGAAGAAGGCCATCGATATGCTGTCTAAAAATCCTGTCTGG
GAGGCTGATGGACCGGAGCCGGAATGGCGGGTCGAGCTGCAGCGAATGCT
CATGCTGAATGTCAAGGCAGAGATGGAGATCCTGTATGACATGGAGGGTG
GCTTGACAGGATGGCTAGATAGGAAGCTGGTCCATCTCATACAAAACAGT
AAGTAGGCCGTATACCGTCGACTCGCAAGCAGCAACTACCACATCAGATC
TGCAGCAGGCAAGGGCGTCCTCGTCACTGATACTCTAGTACCTAGAATGC
AAGACATCCACAAAGTCGACCTTAAAGATGTTGCCTGGGTACTGGTTCTA
GAGAAGGAGGGGGCAGCAGCAAAAGGACTTGTCGTGGGATACTATCAGAT
GACCACCACAAGCGCGGGAGTAGTGGACGCGCGGTTATCAAACCAGAGAC
ATATACTACAGTGATCCTATCTGCTTCGGCTCCCAGAAAACCGTCGATAC
ACTCGTTGATGACCTGGCACACACAATGGGGGTGGATCGTGCTGCATTAT
ATGTGCTGCCGCTCTTCGAGTCCTCGCGGCCATCGCAGAGGCAGTTCAGG
CGGGGTTGGTGGTCTCTAAGAGATGGAAGCATCACATTTAGATGGCATGG
AAGCCGAGGCGTTCGAACGACTAACAATCATCGCTACAATTCCCCAAACA
CCAGTCCAAAGCTACATTCAGGAAACGCTAGCAGCAATCCTGGATGAAGT
ATCCTTCCGTGAAGGCCACCTCTCTATTACCCTCAAACAGAGAGGTAAAA
AGTTTGCCTCACTATTCATTAACCCACGTACATTGGCCCTGGAGACGTCG
GAGATACAGACATACACCACCTACAGATGGCCCGGCGGCGATATGAACGA
AGCATTGAAATTCAGGAAAAGGATATCCTGATCTCAGTACTCGGGCATTC
GTCCGTAAACTCTTCGACCACAGCCACCAACTCACCAAGAAACCGCAATT
CTACGCCTTAGTGGACGGTGACCCCGACGGCATGGCCATTATGGCCACAT
ACAAGTATGGCTCTGTGGCTTTTGCCCACGAAAACCGGAACTTGAATGTG
CCCGGTCTCCACTGGCTAGGTTTGAGACTAGCGGAGGTGGTTGCAGGAGC
TGATCCACTAGGCGATGGCACGCTACTCCATCTTACGAAGCGGGATAGGA
AGAAGGCCATCGATATGCTGTCTAAAAATCCTGTCTGGGAGGCTGATGGA
CCGGAGCCGGAATGGCGGGTCGAGCTGCAGCGAATGCTCATGCTGAATGT
CAAGGCAGAGATGGAGATCCTGTATGACATGGAGGGTGGCTTGACAGGAT
GGCTAGATAGGAAGCTGGTCCATCTCATACAAAACAGTAAGTAGGCCGTA
TACCGTCGACTCGCAAGCAGCAACTACCACATCAGATCTGCAGCAGGCAA
GGGCGTCCTCGTCACTGATACTCTAGTACCTAGAATGCAAGACATCCACA
AAGTCGACCTTAAAGATGTTGCCTGGGTACTGGTTCTAGAGAAGGAGGGG
GCAGCAGCAAAAGGACTTGTCGTGGGATACTATCAGATGACCACCACAAG
CGCGGGAGTAGTGGACGCGCGGTTATCAAACCAGAGACATATACTACAGT
GATCCTATCTGCTTCGGCTCCCAGAAAACCGTCGATACACTCGTTGATGA
CCTGGCACACACAATGGGGGTGGATCGTGCTGCATTATATGTGCTGCCGC
TCTTCGAGTCCTCGCGGCCATCGCAGAGGCAGTTCAGGCGGGGTTGGTGG
TCTCTAAGAGATGGAAGCATCACATTTAGATGGCATGGAAGCCGAGGCGT
TCGAACGACTAACAATCATCGCTACAATTCCCCAAACACCAGTCCAAAGC
TACATTCAGGAAACGCTAGCAGCAATCCTGGATGAAGTATCCTTCCGTGA
AGGCCACCTCTCTATTACCCTCAAACAGAGAGGTAAAAAGTTTGCCTCAC
TATTCATTAACCCACGTACATTGGCCCTGGAGACGTCGGAGATACAGACA
TACACCACCTACAGATGGCCCGGCGGCGATATGAACGAAGCATTGAAATT
CAGGAAAAGGATATCCTGATCTCAGTACTCGGGCATTCGTCCGTAAACTC
TTCGACCACAGCCACCAACTCACCAAGAAACCGCAATTCTACGCCTTAGT
GGACGGTGACCCCGACGGCATGGCCATTATGGCCACATACAAGTATGGCT
CTGTGGCTTTTGCCCACGAAAACCGGAACTTGAATGTGCCCGGTCTCCAC
TGGCTAGGTTTGAGACTAGCGGAGGTGGTTGCAGGAGCTGATCCACTAGG
CGATGGCACGCTACTCCATCTTACGAAGCGGGATAGGAAGAAGGCCATCG
ATATGCTGTCTAAAAATCCTGTCTGGGAGGCTGATGGACCGGAGCCGGAA
TGGCGGGTCGAGCTGCAGCGAATGCTCATGCTGAATGTCAAGGCAGAGAT
GGAGATCCTGTATGACATGGAGGGTGGCTTGACAGGATGGCTAGATAGGA
AGCTGGTCCATCTCATACAAAACAGTAAGTAGGCCGTATACCGTCGACTC
GCAAGCAGCAACTACCACATCAGATCTGCAGCAGGCAAGGGCGTCCTCGT
CACTGATACTCTAGTACCTAGAATGCAAGACATCCACAAAGTCGACCTTA
AAGATGTTGCCTGGGTACTGGTTCTAGAGAAGGAGGGGGCAGCAGCAAAA
GGACTTGTCGTGGGATACTATCAGATGACCACCACAAGCGCGGGAGTAGT
GGACGCGCGGTTATCAAACCAGAGACATATACTACAGTGATCCTATCTGC
TTCGGCTCCCAGAAAACCGTCGATACACTCGTTGATGACCTGGCACACAC
AATGGGGGTGGATCGTGCTGCATTATATGTGCTGCCGCTCTTCGAGTCCT
CGCGGCCATCGCAGAGGCAGTTCAGGCGGGGTTGGTGGTCTCTAAGAGAT
GGAAGCATCACATTTAGATGGCATGGAAGCCGAGGCGTTCGAACGACTAA
CAATCATCGCTACAATTCCCCAAACACCAGTCCAAAGCTACATTCAGGAA
ACGCTAGCAGCAATCCTGGATGAAGTATCCTTCCGTGAAGGCCACCTCTC
TATTACCCTCAAACAGAGAGGTAAAAAGTTTGCCTCACTATTCATTAACC
CACGTACATTGGCCCTGGAGACGTCGGAGATACAGACATACACCACCTAC
AGATGGCCCGGCGGCGATATGAACGAAGCATTGAAATTCAGGAAAAGGAT
ATCCTGATCTCAGTACTCGGGCATTCGTCCGTAAACTCTTCGACCACAGC
CACCAACTCACCAAGAAACCGCAATTCTACGCCTTAGTGGACGGTGACCC
CGACGGCATGGCCATTATGGCCACATACAAGTATGGCTCTGTGGCTTTTG
CCCACGAAAACCGGAACTTGAATGTGCCCGGTCTCCACTGGCTAGGTTTG
AGACTAGCGGAGGTGGTTGCAGGAGCTGATCCACTAGGCGATGGCACGCT
ACTCCATCTTACGAAGCGGGATAGGAAGAAGGCCATCGATATGCTGTCTA
AAAATCCTGTCTGGGAGGCTGATGGACCGGAGCCGGAATGGCGGGTCGAG
CTGCAGCGAATGCTCATGCTGAATGTCAAGGCAGAGATGGAGATCCTGTA
TGACATGGAGGGTGGCTTGACAGGATGGCTAGATAGGAAGCTGGTCCATC
TCATACAAAACAGTAAGTAGGCCGTATACCGTCGACTCGCAAGCAGCAAC
TACCACATCAGATCTGCAGCAGGCAAGGGCGTCCTCGTCACTGATACTCT
AGTACCTAGAATGCAAGACATCCACAAAGTCGACCTTAAAGATGTTGCCT
GGGTACTGGTTCTAGAGAAGGAGGGGGCAGCAGCAAAAGGACTTGTCGTG
GGATACTATCAGATGACCACCACAAGCGCGGGAGTAGTGGACGCGCGGTT
ATCAAACCAGAGACATATACTACAGTGATCCTATCTGCTTCGGCTCCCAG
AAAACCGTCGATACACTCGTTGATGACCTGGCACACACAATGGGGGTGGA
TCGTGCTGCATTATATGTGCTGCCGCTCTTCGAGTCCTCGCGGCCATCGC
AGAGGCAGTTCAGGCGGGGTTGGTGGTCTCTAAGAGATGGAAGCATCACA
TTTAGATGGCATGGAAGCCGAGGCGTTCGAACGACTAACAATCATCGCTA
CAATTCCCCAAACACCAGTCCAAAGCTACATTCAGGAAACGCTAGCAGCA
ATCCTGGATGAAGTATCCTTCCGTGAAGGCCACCTCTCTATTACCCTCAA
ACAGAGAGGTAAAAAGTTTGCCTCACTATTCATTAACCCACGTACATTGG
CCCTGGAGACGTCGGAGATACAGACATACACCACCTACAGATGGCCCGGC
GGCGATATGAACGAAGCATTGAAATTCAGGAAAAGGATATCCTGATCTCA
GTACTCGGGCATTCGTCCGTAAACTCTTCGACCACAGCCACCAACTCACC
AAGAAACCGCAATTCTACGCCTTAGTGGACGGTGACCCCGACGGCATGGC
CATTATGGCCACATACAAGTATGGCTCTGTGGCTTTTGCCCACGAAAACC
GGAACTTGAATGTGCCCGGTCTCCACTGGCTAGGTTTGAGACTAGCGGAG
GTGGTTGCAGGAGCTGATCCACTAGGCGATGGCACGCTACTCCATCTTAC
GAAGCGGGATAGGAAGAAGGCCATCGATATGCTGTCTAAAAATCCTGTCT
GGGAGGCTGATGGACCGGAGCCGGAATGGCGGGTCGAGCTGCAGCGAATG
CTCATGCTGAATGTCAAGGCAGAGATGGAGATCCTGTATGACATGGAGGG
TGGCTTGACAGGATGGCTAGATAGGAAGCTGGTCCATCTCATACAAAACA
GTAAGTAGGCCGTATACCGTCGACTCGCAAGCAGCAACTACCACATCAGA
TCTGCAGCAGGCAAGGGCGTCCTCGTCACTGATACTCTAGTACCTAGAAT
GCAAGACATCCACAAAGTCGACCTTAAAGATGTTGCCTGGGTACTGGTTC
TAGAGAAGGAGGGGGCAGCAGCAAAAGGACTTGTCGTGGGATACTATCAG
ATGACCACCACAAGCGCGGGAGTAGTGGACGCGCGGTTATCAAACCAGAG
ACATATACTACAGTGATCCTATCTGCTTCGGCTCCCAGAAAACCGTCGAT
ACACTCGTTGATGACCTGGCACACACAATGGGGGTGGATCGTGCTGCATT
ATATGTGCTGCCGCTCTTCGAGTCCTCGCGGCCATCGCAGAGGCAGTTCA
GGCGGGGTTGGTGGTCTCTAAGAGATGGAAGCATCACATTTAGATGGCAT
GGAAGCCGAGGCGTTCGAACGACTAACAATCATCGCTACAATTCCCCAAA
CACCAGTCCAAAGCTACATTCAGGAAACGCTAGCAGCAATCCTGGATGAA
GTATCCTTCCGTGAAGGCCACCTCTCTATTACCCTCAAACAGAGAGGTAA
AAAGTTTGCCTCACTATTCATTAACCCACGTACATTGGCCCTGGAGACGT
CGGAGATACAGACATACACCACCTACAGATGGCCCGGCGGCGATATGAAC
GAAGCATTGAAATTCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005694 | chromosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000737 | DNA catabolic process, endonucleolytic |
| GO:0006259 | DNA metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003824 | catalytic activity |
| GO:0016889 | endodeoxyribonuclease activity, producing 3'-phosphomonoesters |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519451.1 |
| DBxref | InterPro:IPR036078 |
| DBxref | InterPro:IPR034136 |
| DBxref | InterPro:IPR013049 |
| DBxref | InterPro:IPR002815 |
| DBxref | PFAM:PF04406 |
| Product | meiotic recombination protein spo11 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851945.1 | supercontig | KZ851945.1:58919..60625 - |
|
