You are here

Home

M747DRAFT_362587-T1, M747DRAFT_362587-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_362587-T1
Unique NameM747DRAFT_362587-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851964.1:9227..10467-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_362587-T1 ID=M747DRAFT_362587-T1|Name=M747DRAFT_362587-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1241bp|location=Sequence derived from alignment at KZ851964.1:9227..10467- (Aspergillus niger ATCC 13496)
ATGGATACTGTGTCTTCAACCACCGCAACCTATGTGTACATCGGCAGCTT
CGTGATGCCTCAACCGGGAAAGCATGAGGGCCTACATGTTTTCCGAGTTG
ACAATGGCACGGGAGCACTCACATTGGTGGCATCATACGTCCCCGGGCTG
AACGTCGGCAGTTTCGCCATTGACTACAAACGTGGCATGCTGTACGTCAC
GGACGAAGTACCGAATGGTGGCCAGATTTATGCCTTCTCAATGGACCCAT
CAACTGGCGGCTTGACTGAGCGAGGTCACTGGCCCAGCTATGGCACCCAA
CCATCGGGAATCGCTCTCGTCGATACCGAAGATATGGTAATTGTTTCCCA
TTTCACGAGTCGGACCGGCATCACCACCATCGCCGGTGATGCCCAGTCAG
GGTATCACATCGAGTGCCGTTACGACGATGCCACAACAGTCCTATTCACT
CTCGATGCCACCGGTTGCTCGGATCAGCCATCCCATGTCCACTTCCATAC
AACCTCGGGTCATCAGAGCAAGCCCTCATGCCTGCATTCTGTCTCACTAT
CACCCGATGGATCCTTTCTCATCGAGTGTGACATGGAGAAAGACCAGCTT
GTTACGATGACAATTGATTATGGCTTACATTCACTACACCTGCAGGGTAT
TCGTGACGTCCCGCATGGCAGTGGCCCACGGTACTCAGCCTTCCACCCCA
CGCTGCCCGTTTTCTACGTCAATTTTGAGTATCGACCAGTAATTGAGGCA
TTCCTTTACAGGGTGGGCGGTGACTATGAATCTTTAGGAACAGTGGACGT
TCTTCCAGAGAACCTGAACGGGGGTTCCGGTGTCTTGCTGTCGGATCTCC
GTGTCCATCCCACCGGAAAATATGTCTACACACTCGTTCGCGGCCACAAC
GTTGTCAGTGCTTTTGCCGTAGACGAGGTGTCCGGTCGCCTACGCCGCAT
TCAGACTGCCAATATCAATGGGATTTCGCCCAAGGGTTGCACATTTAGTC
CCGATGGCCGCTTTTTCTACGTCGCGGTTTCTGTGAGCAACGAAGTGCAG
GTCTGGGCGGTTGATGCTAACGGGATACTTGTGCCGACCCAAGAGACGGC
GGCCGTTCCCCGGCCTAGCGCCATTACGATGGTAGAATTAACACCACCGT
GAGGAGAATGAATGGGTTTTGGGACCCAACTAAAAATGGGCACACCCCCT
TCCTGACATATACTGCCCCCTTGCCGATAGGTCCTACCCGC
back to top

Coding sequence (CDS) from alignment at KZ851964.1:9227..10467-

>M747DRAFT_362587-T1 ID=M747DRAFT_362587-T1|Name=M747DRAFT_362587-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1152bp|location=Sequence derived from alignment at KZ851964.1:9227..10467- (Aspergillus niger ATCC 13496)
ATGGATACTGTGTCTTCAACCACCGCAACCTATGTGTACATCGGCAGCTT
CGTGATGCCTCAACCGGGAAAGCATGAGGGCCTACATGTTTTCCGAGTTG
ACAATGGCACGGGAGCACTCACATTGGTGGCATCATACGTCCCCGGGCTG
AACGTCGGCAGTTTCGCCATTGACTACAAACGTGGCATGCTGTACGTCAC
GGACGAAGTACCGAATGGTGGCCAGATTTATGCCTTCTCAATGGACCCAT
CAACTGGCGGCTTGACTGAGCGAGGTCACTGGCCCAGCTATGGCACCCAA
CCATCGGGAATCGCTCTCGTCGATACCGAAGATATGGTAATTGTTTCCCA
TTTCACGAGTCGGACCGGCATCACCACCATCGCCGGTGATGCCCAGTCAG
GGTATCACATCGAGTGCCGTTACGACGATGCCACAACAGTCCTATTCACT
CTCGATGCCACCGGTTGCTCGGATCAGCCATCCCATGTCCACTTCCATAC
AACCTCGGGTCATCAGAGCAAGCCCTCATGCCTGCATTCTGTCTCACTAT
CACCCGATGGATCCTTTCTCATCGAGTGTGACATGGAGAAAGACCAGCTT
GTTACGATGACAATTGATTATGGCTTACATTCACTACACCTGCAGGGTAT
TCGTGACGTCCCGCATGGCAGTGGCCCACGGTACTCAGCCTTCCACCCCA
CGCTGCCCGTTTTCTACGTCAATTTTGAGTATCGACCAGTAATTGAGGCA
TTCCTTTACAGGGTGGGCGGTGACTATGAATCTTTAGGAACAGTGGACGT
TCTTCCAGAGAACCTGAACGGGGGTTCCGGTGTCTTGCTGTCGGATCTCC
GTGTCCATCCCACCGGAAAATATGTCTACACACTCGTTCGCGGCCACAAC
GTTGTCAGTGCTTTTGCCGTAGACGAGGTGTCCGGTCGCCTACGCCGCAT
TCAGACTGCCAATATCAATGGGATTTCGCCCAAGGGTTGCACATTTAGTC
CCGATGGCCGCTTTTTCTACGTCGCGGTTTCTGTGAGCAACGAAGTGCAG
GTCTGGGCGGTTGATGCTAACGGGATACTTGTGCCGACCCAAGAGACGGC
GGCCGTTCCCCGGCCTAGCGCCATTACGATGGTAGAATTAACACCACCGT
GA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_362587M747DRAFT_362587Aspergillus niger ATCC 13496gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_362587-T1.cdsM747DRAFT_362587-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_362587-T1.utr3p1M747DRAFT_362587-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_362587-T1.exon1M747DRAFT_362587-T1.exon1Aspergillus niger ATCC 13496exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_362587-T1M747DRAFT_362587-T1-proteinAspergillus niger ATCC 13496polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011048
DBxrefInterPro:IPR019405
DBxrefInterPro:IPR015943
DBxrefPFAM:PF10282
Productputative isomerase YbhE
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851964.1supercontigKZ851964.1:9227..10467 -
Powered by Drupal