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M747DRAFT_36336-T1, M747DRAFT_36336-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_36336-T1
Unique NameM747DRAFT_36336-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:182734..183764-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_36336-T1 ID=M747DRAFT_36336-T1|Name=M747DRAFT_36336-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1031bp|location=Sequence derived from alignment at KZ851914.1:182734..183764- (Aspergillus niger ATCC 13496)
CACCGCCCACGAGTAAGATCCCCGAGTCTAATTCAACTGATCAGCTAACC
TTCTTCTCCCCTTCTTTCCACCCCCCCGTCAGACCCGCCTCGATCTCCTT
TCCTGGGGCTTATCATCTTGAATCTCTATCGCCGGAAAGGAACATTTCAA
GCCACCTCTGCGACGCTCCAAGGATATATACTCTGTCCTCTTTTTAATCT
GTTACTCTTCCCTTGTCGGCACTATGGTTGTTTACTCCTTCTATATCTTC
GATCGTCATGGTACCTCCCTCGCATCCATCTCTCCCTAGCCATTTCAATT
GACGTTGCTAACCACGTCTCTCCCTTTCTTCTAGCTGAATGCATCTATAA
TCGGCGCTGGCTGCCACGCCCAACCTCCATGACAGGCAGCAAATCATCAC
GACCGACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGCCAA
ACTGCGCGCGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGTTTT
CTCCCTGCGCAACATGGTTCGCAAGCTAGGAGGCGAGGACGACAAGTAAG
GACTCCACCCTACAGCGACGAGGCAACTCAACTGGGAGGACAGTCATTGA
CCGCTCCGCCACGTTTATAGCTTCGTTACCTACCGCACTAGCCAATACAA
GCTCCATTACTACGAAACGCCGACCAATATCAAGTTCGTTATGCTGACGG
ACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATCAAT
CTATACGTCGAATACGGTACGCTCTGGCTAGTTTAAACGATAACCTCCTC
TACAGCTGTATGCTGACCACCTCTACTTCTAGTGGTCAAGAACCCGTTAT
CTCCCGCCGAGCATCCAGGTGGCATTGGAGTGAACAATGAGCTCTTTGAA
GAGTCTCTGGAACAGTTTGTGGTATGTGCCATCAACGTCTCCTAGGCGGA
TTTAATCTAACCTACAGCAGACTCGTGTTCTATCGTGAAACGGACTTGGA
TAGAGATGAACACTCTGTTCGCTCATGGGTC
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Coding sequence (CDS) from alignment at KZ851914.1:182734..183764-

>M747DRAFT_36336-T1 ID=M747DRAFT_36336-T1|Name=M747DRAFT_36336-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2028bp|location=Sequence derived from alignment at KZ851914.1:182734..183764- (Aspergillus niger ATCC 13496)
TGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCATTGGAGTG
AACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGGTATGTGCCAT
CAACGTCTCCTAGCTTCGTTACCTACCGCACTAGCCAATACAAGCTCCAT
TACTACGAAACGCCGACCAATATCAAGTTCGTTATGCTGACGGACCTCAA
GAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATCAATCTATACG
TCGAATACGCTGAATGCATCTATAATCGGCGCTGGCTGCCACGCCCAACC
TCCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCTCC
GGGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGACGACGATG
CCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCAAG
CTAGGAGGCGAGGACGACAAATGGTTGTTTACTCCTTCTATATCTTCGAT
CGTCATGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCAT
TGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGGTAT
GTGCCATCAACGTCTCCTAGCTTCGTTACCTACCGCACTAGCCAATACAA
GCTCCATTACTACGAAACGCCGACCAATATCAAGTTCGTTATGCTGACGG
ACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATCAAT
CTATACGTCGAATACGCTGAATGCATCTATAATCGGCGCTGGCTGCCACG
CCCAACCTCCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACAT
CTGCTCCGGGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGAC
GACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGT
TCGCAAGCTAGGAGGCGAGGACGACAAATGGTTGTTTACTCCTTCTATAT
CTTCGATCGTCATGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAG
GTGGCATTGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTT
GTGGTATGTGCCATCAACGTCTCCTAGCTTCGTTACCTACCGCACTAGCC
AATACAAGCTCCATTACTACGAAACGCCGACCAATATCAAGTTCGTTATG
CTGACGGACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTA
TATCAATCTATACGTCGAATACGCTGAATGCATCTATAATCGGCGCTGGC
TGCCACGCCCAACCTCCATGACAGGCAGCAAATCATCACGACCGACTTCC
GAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGC
CACGGACGACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCA
ACATGGTTCGCAAGCTAGGAGGCGAGGACGACAAATGGTTGTTTACTCCT
TCTATATCTTCGATCGTCATGTGGTCAAGAACCCGTTATCTCCCGCCGAG
CATCCAGGTGGCATTGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGA
ACAGTTTGTGGTATGTGCCATCAACGTCTCCTAGCTTCGTTACCTACCGC
ACTAGCCAATACAAGCTCCATTACTACGAAACGCCGACCAATATCAAGTT
CGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGC
AGATCTATATCAATCTATACGTCGAATACGCTGAATGCATCTATAATCGG
CGCTGGCTGCCACGCCCAACCTCCATGACAGGCAGCAAATCATCACGACC
GACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGCCAAACTG
CGCGCGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCC
CTGCGCAACATGGTTCGCAAGCTAGGAGGCGAGGACGACAAATGGTTGTT
TACTCCTTCTATATCTTCGATCGTCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030008TRAPP complex
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_36336M747DRAFT_36336Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_36336-T1M747DRAFT_36336-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_36336-T1.cdsM747DRAFT_36336-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_36336-T1.utr3p1M747DRAFT_36336-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_36336-T1.exon5M747DRAFT_36336-T1.exon5Aspergillus niger ATCC 13496exon
M747DRAFT_36336-T1.exon4M747DRAFT_36336-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_36336-T1.exon3M747DRAFT_36336-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_36336-T1.exon2M747DRAFT_36336-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_36336-T1.exon1M747DRAFT_36336-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_36336-T1.utr5p2M747DRAFT_36336-T1.utr5p2Aspergillus niger ATCC 13496five_prime_UTR
M747DRAFT_36336-T1.utr5p1M747DRAFT_36336-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR007233
DBxrefPFAM:PF04099
Productsnare-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:182734..183764 -
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